RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 WNT3P56703 355 aa17.42■□□□□ 0.38
TM6SF1-201ENST00000258909 NRG3P56975 720 aa17.42■□□□□ 0.38
TM6SF1-201ENST00000258909 SNTB1Q13884 538 aaKnown RBP17.42■□□□□ 0.38
TM6SF1-201ENST00000258909 PRICKLE4Q2TBC4 344 aa17.42■□□□□ 0.38
TM6SF1-201ENST00000258909 GLE1Q53GS7 698 aaKnown RBP17.42■□□□□ 0.38
TM6SF1-201ENST00000258909 UNC50Q53HI1 259 aa17.42■□□□□ 0.38
TM6SF1-201ENST00000258909 TBCELQ5QJ74 424 aa17.42■□□□□ 0.38
TM6SF1-201ENST00000258909 FNDC7Q5VTL7 733 aa17.42■□□□□ 0.38
TM6SF1-201ENST00000258909 WDR53Q7Z5U6 358 aaPredicted RBP17.42■□□□□ 0.38
TM6SF1-201ENST00000258909 ULK2Q8IYT8 1036 aa17.42■□□□□ 0.38
TM6SF1-201ENST00000258909 VWA5B2Q8N398 1253 aa17.42■□□□□ 0.38
TM6SF1-201ENST00000258909 OR7G1Q8NGA0 311 aa17.42■□□□□ 0.38
TM6SF1-201ENST00000258909 KLHL29Q96CT2 875 aa17.42■□□□□ 0.38
TM6SF1-201ENST00000258909 C1QTNF3Q9BXJ4 246 aa17.42■□□□□ 0.38
TM6SF1-201ENST00000258909 QPCTLQ9NXS2 382 aa17.42■□□□□ 0.38
TM6SF1-201ENST00000258909 MAT2BQ9NZL9 334 aa17.42■□□□□ 0.38
TM6SF1-201ENST00000258909 TRPS1Q9UHF7 1281 aa17.42■□□□□ 0.38
TM6SF1-201ENST00000258909 GOLGA6L10A6NI86 522 aa17.41■□□□□ 0.38
TM6SF1-201ENST00000258909 FOXO6A8MYZ6 492 aa17.41■□□□□ 0.38
TM6SF1-201ENST00000258909 MANBAO00462 879 aa17.41■□□□□ 0.38
TM6SF1-201ENST00000258909 GUCY1B2O75343 617 aa17.41■□□□□ 0.38
TM6SF1-201ENST00000258909 GABRA1P14867 456 aa17.41■□□□□ 0.38
TM6SF1-201ENST00000258909 SOX18P35713 384 aa17.41■□□□□ 0.38
TM6SF1-201ENST00000258909 CASP3P42574 277 aa17.41■□□□□ 0.38
TM6SF1-201ENST00000258909 DLX5P56178 289 aa17.41■□□□□ 0.38
TM6SF1-201ENST00000258909 MYBPHQ13203 477 aa17.41■□□□□ 0.38
TM6SF1-201ENST00000258909 TOMM20Q15388 145 aa17.41■□□□□ 0.38
TM6SF1-201ENST00000258909 LTB4RQ15722 352 aa17.41■□□□□ 0.38
TM6SF1-201ENST00000258909 SEM1Q6ZVN7 128 aa17.41■□□□□ 0.38
TM6SF1-201ENST00000258909 MYRIPQ8NFW9 859 aa17.41■□□□□ 0.38
TM6SF1-201ENST00000258909 ZNF559Q9BR84 538 aa17.41■□□□□ 0.38
TM6SF1-201ENST00000258909 ITPAQ9BY32 194 aa17.41■□□□□ 0.38
TM6SF1-201ENST00000258909 ANGPTL4Q9BY76 406 aa17.41■□□□□ 0.38
TM6SF1-201ENST00000258909 BRF2Q9HAW0 419 aa17.41■□□□□ 0.38
TM6SF1-201ENST00000258909 SLC6A5Q9Y345 797 aa17.41■□□□□ 0.38
TM6SF1-201ENST00000258909 GOLGA8RI6L899 631 aa17.4■□□□□ 0.38
TM6SF1-201ENST00000258909 GNB5O14775 395 aa17.4■□□□□ 0.38
TM6SF1-201ENST00000258909 DLX3O60479 287 aa17.4■□□□□ 0.38
TM6SF1-201ENST00000258909 ABCB1P08183 1280 aaPredicted RBP17.4■□□□□ 0.38
TM6SF1-201ENST00000258909 KRT15P19012 456 aa17.4■□□□□ 0.38
TM6SF1-201ENST00000258909 CSNK2A2P19784 350 aaPredicted RBP17.4■□□□□ 0.38
TM6SF1-201ENST00000258909 TMED10P49755 219 aaKnown RBP17.4■□□□□ 0.38
TM6SF1-201ENST00000258909 TRMT12Q53H54 448 aaKnown RBP17.4■□□□□ 0.38
TM6SF1-201ENST00000258909 ZNF678Q5SXM1 525 aa17.4■□□□□ 0.38
TM6SF1-201ENST00000258909 LGSNQ5TDP6 509 aa17.4■□□□□ 0.38
TM6SF1-201ENST00000258909 PACS2Q86VP3 889 aa17.4■□□□□ 0.38
TM6SF1-201ENST00000258909 TMEM200AQ86VY9 491 aa17.4■□□□□ 0.38
TM6SF1-201ENST00000258909 CLYBLQ8N0X4 340 aa17.4■□□□□ 0.38
TM6SF1-201ENST00000258909 CNRIP1Q96F85 164 aaPredicted RBP17.4■□□□□ 0.38
TM6SF1-201ENST00000258909 TMEM237Q96Q45 408 aa17.4■□□□□ 0.38
TM6SF1-201ENST00000258909 TIMP4Q99727 224 aa17.4■□□□□ 0.38
TM6SF1-201ENST00000258909 EHD3Q9NZN3 535 aa17.4■□□□□ 0.38
TM6SF1-201ENST00000258909 HEY2Q9UBP5 337 aa17.4■□□□□ 0.38
TM6SF1-201ENST00000258909 VPS29Q9UBQ0 182 aa17.4■□□□□ 0.38
TM6SF1-201ENST00000258909 KIAA1549Q9HCM3 1950 aa17.4■□□□□ 0.38
TM6SF1-201ENST00000258909 AKAP6Q13023 2319 aa17.4■□□□□ 0.38
TM6SF1-201ENST00000258909 MAP1AP78559 2803 aaPredicted RBP17.39■□□□□ 0.37
TM6SF1-201ENST00000258909 C2orf72A6NCS6 295 aa17.39■□□□□ 0.37
TM6SF1-201ENST00000258909 SNX4O95219 450 aa17.39■□□□□ 0.37
TM6SF1-201ENST00000258909 ESRRBO95718 433 aa17.39■□□□□ 0.37
TM6SF1-201ENST00000258909 CBX7O95931 251 aa17.39■□□□□ 0.37
TM6SF1-201ENST00000258909 ATP1B1P05026 303 aa17.39■□□□□ 0.37
TM6SF1-201ENST00000258909 TAC1P20366 129 aa17.39■□□□□ 0.37
TM6SF1-201ENST00000258909 CDK9P50750 372 aaKnown RBP17.39■□□□□ 0.37
TM6SF1-201ENST00000258909 MRPS35P82673 323 aaKnown RBP17.39■□□□□ 0.37
TM6SF1-201ENST00000258909 CRYZQ08257 329 aaKnown RBP17.39■□□□□ 0.37
TM6SF1-201ENST00000258909 MAP4K2Q12851 820 aa17.39■□□□□ 0.37
TM6SF1-201ENST00000258909 EIPR1Q53HC9 387 aa17.39■□□□□ 0.37
TM6SF1-201ENST00000258909 RIPPLY2Q5TAB7 128 aa17.39■□□□□ 0.37
TM6SF1-201ENST00000258909 TIFABQ6ZNK6 161 aa17.39■□□□□ 0.37
TM6SF1-201ENST00000258909 NAXEQ8NCW5 288 aa17.39■□□□□ 0.37
TM6SF1-201ENST00000258909 OR52R1Q8NGF1 315 aa17.39■□□□□ 0.37
TM6SF1-201ENST00000258909 SECISBP2Q96T21 854 aaKnown RBP17.39■□□□□ 0.37
TM6SF1-201ENST00000258909 UBQLN3Q9H347 655 aa17.39■□□□□ 0.37
TM6SF1-201ENST00000258909 ANKRA2Q9H9E1 313 aa17.39■□□□□ 0.37
TM6SF1-201ENST00000258909 RYDENQ9NUL5 291 aaKnown RBP17.39■□□□□ 0.37
TM6SF1-201ENST00000258909 NMRK1Q9NWW6 199 aa17.39■□□□□ 0.37
TM6SF1-201ENST00000258909 ZNF639Q9UID6 485 aa17.39■□□□□ 0.37
TM6SF1-201ENST00000258909 C15orf41Q9Y2V0 281 aa17.39■□□□□ 0.37
TM6SF1-201ENST00000258909 PLLPQ9Y342 182 aa17.39■□□□□ 0.37
TM6SF1-201ENST00000258909 RIPK2O43353 540 aa17.38■□□□□ 0.37
TM6SF1-201ENST00000258909 NME6O75414 186 aaPredicted RBP17.38■□□□□ 0.37
TM6SF1-201ENST00000258909 PPM1BO75688 479 aa17.38■□□□□ 0.37
TM6SF1-201ENST00000258909 HPNP05981 417 aa17.38■□□□□ 0.37
TM6SF1-201ENST00000258909 ABHD2P08910 425 aa17.38■□□□□ 0.37
TM6SF1-201ENST00000258909 HTR6P50406 440 aa17.38■□□□□ 0.37
TM6SF1-201ENST00000258909 RPP38P78345 283 aaKnown RBP17.38■□□□□ 0.37
TM6SF1-201ENST00000258909 WIPI1Q5MNZ9 446 aaPredicted RBP17.38■□□□□ 0.37
TM6SF1-201ENST00000258909 GPRIN3Q6ZVF9 776 aa17.38■□□□□ 0.37
TM6SF1-201ENST00000258909 C17orf47Q8NEP4 570 aa17.38■□□□□ 0.37
TM6SF1-201ENST00000258909 TNIP2Q8NFZ5 429 aa17.38■□□□□ 0.37
TM6SF1-201ENST00000258909 METTL6Q8TCB7 284 aa17.38■□□□□ 0.37
TM6SF1-201ENST00000258909 NRGNQ92686 78 aa17.38■□□□□ 0.37
TM6SF1-201ENST00000258909 OMA1Q96E52 524 aa17.38■□□□□ 0.37
TM6SF1-201ENST00000258909 ZNF681Q96N22 645 aa17.38■□□□□ 0.37
TM6SF1-201ENST00000258909 NODALQ96S42 347 aa17.38■□□□□ 0.37
TM6SF1-201ENST00000258909 FAIM2Q9BWQ8 316 aa17.38■□□□□ 0.37
TM6SF1-201ENST00000258909 METTL7AQ9H8H3 244 aa17.38■□□□□ 0.37
TM6SF1-201ENST00000258909 PFDN4Q9NQP4 134 aa17.38■□□□□ 0.37
TM6SF1-201ENST00000258909 KCNN3Q9UGI6 736 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms