RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 LMAN1LQ9HAT1 526 aa6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 SLC7A11Q9UPY5 501 aa6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 OR6C68A6NDL8 312 aa6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 AQP7P3A6NL99 342 aa6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 SEC22BO75396 215 aa6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 TPT1P13693 172 aaKnown RBP6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 SNCAP37840 140 aa6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 INCA1Q0VD86 236 aa6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 SLAMF1Q13291 335 aa6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 PIGHQ14442 188 aaPredicted RBP6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 TBCEQ15813 527 aaPredicted RBP6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 MAPK14Q16539 360 aa6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 DUOXA2Q1HG44 320 aa6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 C3orf38Q5JPI3 329 aa6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 FAM109BQ6ICB4 259 aaPredicted RBP6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 METAP1DQ6UB28 335 aaPredicted RBP6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 GPRIN3Q6ZVF9 776 aa6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 PLEKHH3Q7Z736 793 aa6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 SERPINA12Q8IW75 414 aa6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 THEM5Q8N1Q8 247 aa6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 ITCHQ96J02 903 aa6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 CELF6Q96J87 481 aaKnown RBP6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 ST6GAL2Q96JF0 529 aa6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 ASB16Q96NS5 453 aa6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 FCRL3Q96P31 734 aaPredicted RBP6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 KCNC2Q96PR1 638 aa6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 SULT4A1Q9BR01 284 aa6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 AARSD1Q9BTE6 412 aaKnown RBP6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 NXF2Q9GZY0 626 aaKnown RBP6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 HSD3B7Q9H2F3 369 aa6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 ELF5Q9UKW6 265 aaPredicted RBP6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 A0A096LPK6 155 aa6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 TRAV19A0A0A6YYK7 116 aa6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 DCDC2BA2VCK2 349 aa6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 UBFD1O14562 309 aaKnown RBP6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 SURF4O15260 269 aa6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 PQBP1O60828 265 aaKnown RBP6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 AK1P00568 194 aa6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 SERPINA5P05154 406 aa6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 HIST1H2AGP0C0S8 130 aaPredicted RBP6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 SELLP14151 372 aa6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 CD1EP15812 388 aa6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 HIST1H2ADP20671 130 aa6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 HTR1BP28222 390 aa6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 GNA15P30679 374 aa6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 CSF2RBP32927 897 aa6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 GLRBP48167 497 aa6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 FABP6P51161 128 aa6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 EPHA4P54764 986 aa6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 ZNF763Q0D2J5 394 aa6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 FSCN1Q16658 493 aaKnown RBP6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 HIST2H2AA3Q6FI13 130 aa6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 WDR73Q6P4I2 378 aa6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 SLC16A9Q7RTY1 509 aa6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 TP53I13Q8NBR0 393 aaPredicted RBP6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 ZNF548Q8NEK5 533 aaPredicted RBP6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 OR8D4Q8NGM9 314 aa6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 PAQR8Q8TEZ7 354 aa6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 SMAP2Q8WU79 429 aaPredicted RBP6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 PHYHIPQ92561 330 aa6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 TMEM18Q96B42 140 aa6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 SHDQ96IW2 340 aa6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 HIST1H2AHQ96KK5 128 aa6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 HIST1H2AJQ99878 128 aa6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 ENKD1Q9H0I2 346 aa6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 TMEM8AQ9HCN3 771 aa6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 FLRT1Q9NZU1 646 aa6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 RNF11Q9Y3C5 154 aa6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 A0A1B0GTW7 788 aa6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 KLRG2A4D1S0 409 aaPredicted RBP6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 CCSO14618 274 aa6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 TBXA2RP21731 343 aa6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 ATP5C1P36542 298 aaKnown RBP6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 RAB1AP62820 205 aa6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 SLC10A1Q14973 349 aa6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 CGB2Q6NT52 195 aa6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 BEST3Q8N1M1 668 aa6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 TMEM130Q8N3G9 435 aa6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 GLYATL2Q8WU03 294 aa6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 COQ8BQ96D53 544 aa6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 WDR18Q9BV38 432 aa6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 MVB12BQ9H7P6 319 aa6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 GBA2Q9HCG7 927 aaPredicted RBP6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 UBQLN4Q9NRR5 601 aa6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 ACSS1Q9NUB1 689 aaPredicted RBP6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 GPATCH2Q9NW75 528 aa6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 A0A0U1RQK1 487 aa6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 F5H5P2 479 aa6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 MT-CO1P00395 513 aa6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 OR8U8P0C7N1 319 aa6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 BCKDHAP12694 445 aa6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 FABP4P15090 132 aa6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 PTPRAP18433 802 aa6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 ATP5A1P25705 553 aaKnown RBP6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 CRYZQ08257 329 aaKnown RBP6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 GTDC1Q4AE62 458 aa6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 KANSL1Q7Z3B3 1105 aa6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 OR8U1Q8NH10 309 aa6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 WDR20Q8TBZ3 569 aa6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 SH2D3AQ9BRG2 576 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms