RNA–Protein interactions for RNA: ENST00000254941.6

NIP7-202, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 1 (best) BASIC

Gene NIP7, Length 1,887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-202ENST00000254941 PPP1R3BQ86XI6 285 aa8.85□□□□□ -0.99
NIP7-202ENST00000254941 LGI4Q8N135 537 aa8.85□□□□□ -0.99
NIP7-202ENST00000254941 METTL25Q8N6Q8 603 aa8.85□□□□□ -0.99
NIP7-202ENST00000254941 BMPERQ8N8U9 685 aa8.85□□□□□ -0.99
NIP7-202ENST00000254941 SLC38A9Q8NBW4 561 aa8.85□□□□□ -0.99
NIP7-202ENST00000254941 PPWD1Q96BP3 646 aaKnown RBP8.85□□□□□ -0.99
NIP7-202ENST00000254941 RBM18Q96H35 190 aaKnown RBP8.85□□□□□ -0.99
NIP7-202ENST00000254941 CHID1Q9BWS9 393 aa8.85□□□□□ -0.99
NIP7-202ENST00000254941 ACTRT3Q9BYD9 372 aa8.85□□□□□ -0.99
NIP7-202ENST00000254941 ALOXE3Q9BYJ1 711 aa8.85□□□□□ -0.99
NIP7-202ENST00000254941 SLC7A5P2Q9GIP4 190 aa8.85□□□□□ -0.99
NIP7-202ENST00000254941 CXorf21Q9HAI6 301 aa8.85□□□□□ -0.99
NIP7-202ENST00000254941 AGPAT4Q9NRZ5 378 aa8.85□□□□□ -0.99
NIP7-202ENST00000254941 OCIAD1Q9NX40 245 aa8.85□□□□□ -0.99
NIP7-202ENST00000254941 P2RX2Q9UBL9 471 aa8.85□□□□□ -0.99
NIP7-202ENST00000254941 ANGPT4Q9Y264 503 aa8.85□□□□□ -0.99
NIP7-202ENST00000254941 MMACHCQ9Y4U1 282 aa8.85□□□□□ -0.99
NIP7-202ENST00000254941 PRAMEF27A3QJZ7 478 aa8.84□□□□□ -0.99
NIP7-202ENST00000254941 OR2W5A6NFC9 320 aa8.84□□□□□ -0.99
NIP7-202ENST00000254941 DUXAA6NLW8 204 aa8.84□□□□□ -0.99
NIP7-202ENST00000254941 C4orf47A7E2U8 309 aa8.84□□□□□ -0.99
NIP7-202ENST00000254941 TPST1O60507 370 aa8.84□□□□□ -0.99
NIP7-202ENST00000254941 SCRG1O75711 98 aa8.84□□□□□ -0.99
NIP7-202ENST00000254941 BCHEP06276 602 aa8.84□□□□□ -0.99
NIP7-202ENST00000254941 HBQ1P09105 142 aa8.84□□□□□ -0.99
NIP7-202ENST00000254941 CT62P0C5K7 136 aa8.84□□□□□ -0.99
NIP7-202ENST00000254941 MAOAP21397 527 aa8.84□□□□□ -0.99
NIP7-202ENST00000254941 CCKBRP32239 447 aa8.84□□□□□ -0.99
NIP7-202ENST00000254941 STT3AP46977 705 aa8.84□□□□□ -0.99
NIP7-202ENST00000254941 CLCN2P51788 898 aa8.84□□□□□ -0.99
NIP7-202ENST00000254941 ILKQ13418 452 aa8.84□□□□□ -0.99
NIP7-202ENST00000254941 SERTAD2Q14140 314 aa8.84□□□□□ -0.99
NIP7-202ENST00000254941 TRIP10Q15642 601 aa8.84□□□□□ -0.99
NIP7-202ENST00000254941 OGFRL1Q5TC84 451 aaPredicted RBP8.84□□□□□ -0.99
NIP7-202ENST00000254941 ARHGAP40Q5TG30 622 aa8.84□□□□□ -0.99
NIP7-202ENST00000254941 C1orf189Q5VU69 101 aa8.84□□□□□ -0.99
NIP7-202ENST00000254941 HMBOX1Q6NT76 420 aa8.84□□□□□ -0.99
NIP7-202ENST00000254941 MFSD12Q6NUT3 480 aa8.84□□□□□ -0.99
NIP7-202ENST00000254941 DGAT2L6Q6ZPD8 337 aa8.84□□□□□ -0.99
NIP7-202ENST00000254941 QSOX2Q6ZRP7 698 aa8.84□□□□□ -0.99
NIP7-202ENST00000254941 VWA5B2Q8N398 1253 aa8.84□□□□□ -0.99
NIP7-202ENST00000254941 SIMC1Q8NDZ2 872 aa8.84□□□□□ -0.99
NIP7-202ENST00000254941 XAGE5Q8WWM1 108 aa8.84□□□□□ -0.99
NIP7-202ENST00000254941 RIT1Q92963 219 aa8.84□□□□□ -0.99
NIP7-202ENST00000254941 SLC47A1Q96FL8 570 aa8.84□□□□□ -0.99
NIP7-202ENST00000254941 C16orf58Q96GQ5 468 aa8.84□□□□□ -0.99
NIP7-202ENST00000254941 OR7D2Q96RA2 312 aa8.84□□□□□ -0.99
NIP7-202ENST00000254941 CDC6Q99741 560 aa8.84□□□□□ -0.99
NIP7-202ENST00000254941 YIPF2Q9BWQ6 316 aa8.84□□□□□ -0.99
NIP7-202ENST00000254941 YY1AP1Q9H869 796 aa8.84□□□□□ -0.99
NIP7-202ENST00000254941 APMAPQ9HDC9 416 aa8.84□□□□□ -0.99
NIP7-202ENST00000254941 PARD6AQ9NPB6 346 aa8.84□□□□□ -0.99
NIP7-202ENST00000254941 MKKSQ9NPJ1 570 aaPredicted RBP8.84□□□□□ -0.99
NIP7-202ENST00000254941 EQTNQ9NQ60 294 aa8.84□□□□□ -0.99
NIP7-202ENST00000254941 ZNF639Q9UID6 485 aa8.84□□□□□ -0.99
NIP7-202ENST00000254941 IGLV3-12A0A075B6K2 115 aa8.83□□□□□ -1
NIP7-202ENST00000254941 IGKV3D-11A0A0A0MRZ8 115 aa8.83□□□□□ -1
NIP7-202ENST00000254941 TMEM247A6NEH6 219 aa8.83□□□□□ -1
NIP7-202ENST00000254941 EFCAB7A8K855 629 aa8.83□□□□□ -1
NIP7-202ENST00000254941 TMEM229AB2RXF0 380 aa8.83□□□□□ -1
NIP7-202ENST00000254941 C5orf58C9J3I9 102 aa8.83□□□□□ -1
NIP7-202ENST00000254941 AGRPO00253 132 aa8.83□□□□□ -1
NIP7-202ENST00000254941 POLR1CO15160 346 aaPredicted RBP8.83□□□□□ -1
NIP7-202ENST00000254941 PGM3O95394 542 aa8.83□□□□□ -1
NIP7-202ENST00000254941 ZNF682O95780 498 aa8.83□□□□□ -1
NIP7-202ENST00000254941 ONECUT2O95948 504 aa8.83□□□□□ -1
NIP7-202ENST00000254941 IFNA14P01570 189 aa8.83□□□□□ -1
NIP7-202ENST00000254941 S1PR1P21453 382 aa8.83□□□□□ -1
NIP7-202ENST00000254941 TGM1P22735 817 aa8.83□□□□□ -1
NIP7-202ENST00000254941 PEX2P28328 305 aa8.83□□□□□ -1
NIP7-202ENST00000254941 GALNSP34059 522 aa8.83□□□□□ -1
NIP7-202ENST00000254941 RORAP35398 523 aa8.83□□□□□ -1
NIP7-202ENST00000254941 MAGEA2P43356 314 aa8.83□□□□□ -1
NIP7-202ENST00000254941 SELENOWP63302 87 aa8.83□□□□□ -1
NIP7-202ENST00000254941 E2F1Q01094 437 aa8.83□□□□□ -1
NIP7-202ENST00000254941 MC2RQ01718 297 aa8.83□□□□□ -1
NIP7-202ENST00000254941 GNA13Q14344 377 aa8.83□□□□□ -1
NIP7-202ENST00000254941 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.83□□□□□ -1
NIP7-202ENST00000254941 CYBRD1Q53TN4 286 aa8.83□□□□□ -1
NIP7-202ENST00000254941 VWA2Q5GFL6 755 aa8.83□□□□□ -1
NIP7-202ENST00000254941 EXOSC6Q5RKV6 272 aaKnown RBP8.83□□□□□ -1
NIP7-202ENST00000254941 LPCAT4Q643R3 524 aa8.83□□□□□ -1
NIP7-202ENST00000254941 CDC73Q6P1J9 531 aa8.83□□□□□ -1
NIP7-202ENST00000254941 ZCCHC12Q6PEW1 402 aa8.83□□□□□ -1
NIP7-202ENST00000254941 RBM44Q6ZP01 1051 aaKnown RBP8.83□□□□□ -1
NIP7-202ENST00000254941 COX15Q7KZN9 410 aa8.83□□□□□ -1
NIP7-202ENST00000254941 AMIGO2Q86SJ2 522 aa8.83□□□□□ -1
NIP7-202ENST00000254941 PATL1Q86TB9 770 aaKnown RBP8.83□□□□□ -1
NIP7-202ENST00000254941 GALNT12Q8IXK2 581 aa8.83□□□□□ -1
NIP7-202ENST00000254941 SLC16A11Q8NCK7 471 aa8.83□□□□□ -1
NIP7-202ENST00000254941 C7orf57Q8NEG2 295 aa8.83□□□□□ -1
NIP7-202ENST00000254941 OR10Q1Q8NGQ4 319 aa8.83□□□□□ -1
NIP7-202ENST00000254941 TAMM41Q96BW9 452 aa8.83□□□□□ -1
NIP7-202ENST00000254941 TMEM19Q96HH6 336 aa8.83□□□□□ -1
NIP7-202ENST00000254941 ZNF578Q96N58 590 aaPredicted RBP8.83□□□□□ -1
NIP7-202ENST00000254941 PTCHD1Q96NR3 888 aa8.83□□□□□ -1
NIP7-202ENST00000254941 DGAT2Q96PD7 388 aa8.83□□□□□ -1
NIP7-202ENST00000254941 TREX2Q9BQ50 279 aaPredicted RBP8.83□□□□□ -1
NIP7-202ENST00000254941 PELOQ9BRX2 385 aaKnown RBP8.83□□□□□ -1
NIP7-202ENST00000254941 YIPF4Q9BSR8 244 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms