RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 DHDHQ9UQ10 334 aa18.04■□□□□ 0.48
PTPRE-201ENST00000254667 HLCSP50747 726 aa18.04■□□□□ 0.48
PTPRE-201ENST00000254667 ZNF551Q7Z340 670 aaPredicted RBP18.04■□□□□ 0.48
PTPRE-201ENST00000254667 GAL3ST3Q96A11 431 aa18.04■□□□□ 0.48
PTPRE-201ENST00000254667 FAM210AQ96ND0 272 aa18.04■□□□□ 0.48
PTPRE-201ENST00000254667 CNN2Q99439 309 aaKnown RBP18.04■□□□□ 0.48
PTPRE-201ENST00000254667 FKBP14Q9NWM8 211 aa18.04■□□□□ 0.48
PTPRE-201ENST00000254667 ACTR10Q9NZ32 417 aa18.04■□□□□ 0.48
PTPRE-201ENST00000254667 P04436 131 aa18.03■□□□□ 0.48
PTPRE-201ENST00000254667 TIMP2P16035 220 aa18.03■□□□□ 0.48
PTPRE-201ENST00000254667 STOMP27105 288 aa18.03■□□□□ 0.48
PTPRE-201ENST00000254667 ETV4P43268 484 aa18.03■□□□□ 0.48
PTPRE-201ENST00000254667 OGFRL1Q5TC84 451 aaPredicted RBP18.03■□□□□ 0.48
PTPRE-201ENST00000254667 RAET1LQ5VY80 246 aa18.03■□□□□ 0.48
PTPRE-201ENST00000254667 ACBD7Q8N6N7 88 aa18.03■□□□□ 0.48
PTPRE-201ENST00000254667 SPERTQ8NA61 448 aa18.03■□□□□ 0.48
PTPRE-201ENST00000254667 PMM1Q92871 262 aa18.03■□□□□ 0.48
PTPRE-201ENST00000254667 TESCQ96BS2 214 aa18.03■□□□□ 0.48
PTPRE-201ENST00000254667 KCNK12Q9HB15 430 aa18.03■□□□□ 0.48
PTPRE-201ENST00000254667 AP1M2Q9Y6Q5 423 aa18.03■□□□□ 0.48
PTPRE-201ENST00000254667 ALS2Q96Q42 1657 aa18.03■□□□□ 0.48
PTPRE-201ENST00000254667 DDCP20711 480 aa18.03■□□□□ 0.48
PTPRE-201ENST00000254667 PTNP21246 168 aa18.03■□□□□ 0.48
PTPRE-201ENST00000254667 VAMP1P23763 118 aa18.03■□□□□ 0.48
PTPRE-201ENST00000254667 GRK5P34947 590 aa18.03■□□□□ 0.48
PTPRE-201ENST00000254667 P2RY2P41231 377 aa18.03■□□□□ 0.48
PTPRE-201ENST00000254667 INHBCP55103 352 aa18.03■□□□□ 0.48
PTPRE-201ENST00000254667 CDK3Q00526 305 aa18.03■□□□□ 0.48
PTPRE-201ENST00000254667 CDKL1Q00532 357 aa18.03■□□□□ 0.48
PTPRE-201ENST00000254667 VEZF1Q14119 521 aa18.03■□□□□ 0.48
PTPRE-201ENST00000254667 Q6ZSR6 202 aa18.03■□□□□ 0.48
PTPRE-201ENST00000254667 THAP3Q8WTV1 239 aaPredicted RBP18.03■□□□□ 0.48
PTPRE-201ENST00000254667 ISOC1Q96CN7 298 aa18.03■□□□□ 0.48
PTPRE-201ENST00000254667 DHRS4Q9BTZ2 278 aa18.03■□□□□ 0.48
PTPRE-201ENST00000254667 MTG2Q9H4K7 406 aa18.03■□□□□ 0.48
PTPRE-201ENST00000254667 ZNF224Q9NZL3 707 aa18.03■□□□□ 0.48
PTPRE-201ENST00000254667 PKD1L3Q7Z443 1732 aa18.03■□□□□ 0.48
PTPRE-201ENST00000254667 TEX13DA0A0J9YY54 714 aaPredicted RBP18.03■□□□□ 0.48
PTPRE-201ENST00000254667 A0A1W2PPW3 197 aa18.03■□□□□ 0.48
PTPRE-201ENST00000254667 HSPA12AO43301 675 aa18.03■□□□□ 0.48
PTPRE-201ENST00000254667 YES1P07947 543 aa18.03■□□□□ 0.48
PTPRE-201ENST00000254667 TIMM29Q9BSF4 260 aa18.03■□□□□ 0.48
PTPRE-201ENST00000254667 WACQ9BTA9 647 aa18.03■□□□□ 0.48
PTPRE-201ENST00000254667 IFNA7P01567 189 aa18.03■□□□□ 0.48
PTPRE-201ENST00000254667 TNFRSF4P43489 277 aa18.03■□□□□ 0.48
PTPRE-201ENST00000254667 MAB21L1Q13394 359 aa18.03■□□□□ 0.48
PTPRE-201ENST00000254667 ALG10BQ5I7T1 473 aa18.03■□□□□ 0.48
PTPRE-201ENST00000254667 PNCKQ6P2M8 343 aa18.03■□□□□ 0.48
PTPRE-201ENST00000254667 OR2T4Q8NH00 348 aa18.03■□□□□ 0.48
PTPRE-201ENST00000254667 ELP5Q8TE02 316 aa18.03■□□□□ 0.48
PTPRE-201ENST00000254667 A6NCN8 305 aa18.02■□□□□ 0.48
PTPRE-201ENST00000254667 CAPZA1P52907 286 aa18.02■□□□□ 0.48
PTPRE-201ENST00000254667 PYHIN1Q6K0P9 492 aa18.02■□□□□ 0.48
PTPRE-201ENST00000254667 LRR1Q96L50 414 aa18.02■□□□□ 0.48
PTPRE-201ENST00000254667 CTBP2P56545 445 aa18.02■□□□□ 0.48
PTPRE-201ENST00000254667 TRA2BP62995 288 aaKnown RBP18.02■□□□□ 0.48
PTPRE-201ENST00000254667 RIN1Q13671 783 aa18.02■□□□□ 0.48
PTPRE-201ENST00000254667 ENPP6Q6UWR7 440 aa18.02■□□□□ 0.48
PTPRE-201ENST00000254667 TSPYL5Q86VY4 417 aaPredicted RBP18.02■□□□□ 0.48
PTPRE-201ENST00000254667 PIANPQ8IYJ0 282 aa18.02■□□□□ 0.48
PTPRE-201ENST00000254667 FCAMRQ8WWV6 532 aa18.02■□□□□ 0.48
PTPRE-201ENST00000254667 SLC39A13Q96H72 371 aa18.02■□□□□ 0.48
PTPRE-201ENST00000254667 FRMD6Q96NE9 622 aa18.02■□□□□ 0.48
PTPRE-201ENST00000254667 ZBTB20Q9HC78 741 aaPredicted RBP18.02■□□□□ 0.48
PTPRE-201ENST00000254667 MYOCOSA0A1B0GUC4 107 aa18.02■□□□□ 0.48
PTPRE-201ENST00000254667 SOCS2O14508 198 aa18.02■□□□□ 0.48
PTPRE-201ENST00000254667 BMP2P12643 396 aa18.02■□□□□ 0.48
PTPRE-201ENST00000254667 GMPRP36959 345 aa18.02■□□□□ 0.48
PTPRE-201ENST00000254667 SOX2P48431 317 aa18.02■□□□□ 0.48
PTPRE-201ENST00000254667 RAB39AQ14964 217 aa18.02■□□□□ 0.48
PTPRE-201ENST00000254667 SPHARQ15513 63 aa18.02■□□□□ 0.48
PTPRE-201ENST00000254667 C1orf189Q5VU69 101 aa18.02■□□□□ 0.48
PTPRE-201ENST00000254667 SLC22A16Q86VW1 577 aa18.02■□□□□ 0.48
PTPRE-201ENST00000254667 ARRDC2Q8TBH0 407 aa18.02■□□□□ 0.48
PTPRE-201ENST00000254667 TANKQ92844 425 aa18.02■□□□□ 0.48
PTPRE-201ENST00000254667 CREB3L1Q96BA8 519 aa18.02■□□□□ 0.48
PTPRE-201ENST00000254667 OR6C2Q9NZP2 312 aa18.02■□□□□ 0.48
PTPRE-201ENST00000254667 ERVK-18Q9QC07 812 aa18.02■□□□□ 0.48
PTPRE-201ENST00000254667 ABCD2Q9UBJ2 740 aa18.02■□□□□ 0.48
PTPRE-201ENST00000254667 GJE1A6NN92 205 aa18.02■□□□□ 0.47
PTPRE-201ENST00000254667 DENRO43583 198 aaKnown RBP18.02■□□□□ 0.47
PTPRE-201ENST00000254667 LIPKQ5VXJ0 399 aa18.02■□□□□ 0.47
PTPRE-201ENST00000254667 TMPPEQ6ZT21 453 aa18.02■□□□□ 0.47
PTPRE-201ENST00000254667 NINJ1Q92982 152 aa18.02■□□□□ 0.47
PTPRE-201ENST00000254667 DDIT4LQ96D03 193 aa18.02■□□□□ 0.47
PTPRE-201ENST00000254667 MGLLQ99685 303 aa18.02■□□□□ 0.47
PTPRE-201ENST00000254667 SLC6A15Q9H2J7 730 aa18.02■□□□□ 0.47
PTPRE-201ENST00000254667 DKK3Q9UBP4 350 aa18.02■□□□□ 0.47
PTPRE-201ENST00000254667 NME4O00746 187 aa18.02■□□□□ 0.47
PTPRE-201ENST00000254667 PRKYO43930 277 aa18.02■□□□□ 0.47
PTPRE-201ENST00000254667 CDC40O60508 579 aaKnown RBP eCLIP18.02■□□□□ 0.47
PTPRE-201ENST00000254667 ANXA3P12429 323 aa18.02■□□□□ 0.47
PTPRE-201ENST00000254667 RIDAP52758 137 aaKnown RBP18.02■□□□□ 0.47
PTPRE-201ENST00000254667 OR4K5Q8NGD3 323 aa18.02■□□□□ 0.47
PTPRE-201ENST00000254667 FEVQ99581 238 aa18.02■□□□□ 0.47
PTPRE-201ENST00000254667 FRKP42685 505 aaPredicted RBP18.01■□□□□ 0.47
PTPRE-201ENST00000254667 E2F1Q01094 437 aa18.01■□□□□ 0.47
PTPRE-201ENST00000254667 DLX2Q07687 328 aaPredicted RBP18.01■□□□□ 0.47
PTPRE-201ENST00000254667 FAM69BQ5VUD6 431 aa18.01■□□□□ 0.47
PTPRE-201ENST00000254667 ZNF765Q7L2R6 523 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms