RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 ATP1A4Q13733 1029 aa17.61■□□□□ 0.41
PDLIM4-201ENST00000253754 TJAP1Q5JTD0 557 aa17.61■□□□□ 0.41
PDLIM4-201ENST00000253754 DCST1Q5T197 706 aa17.61■□□□□ 0.41
PDLIM4-201ENST00000253754 ZNF425Q6IV72 752 aa17.61■□□□□ 0.41
PDLIM4-201ENST00000253754 PTCHD4Q6ZW05 846 aa17.61■□□□□ 0.41
PDLIM4-201ENST00000253754 SNX29P2Q8IUI4 249 aa17.61■□□□□ 0.41
PDLIM4-201ENST00000253754 CACTIN-AS1Q8N1I8 211 aa17.61■□□□□ 0.41
PDLIM4-201ENST00000253754 TBC1D19Q8N5T2 526 aa17.61■□□□□ 0.41
PDLIM4-201ENST00000253754 ZNF675Q8TD23 568 aa17.61■□□□□ 0.41
PDLIM4-201ENST00000253754 SLC38A4Q969I6 547 aa17.61■□□□□ 0.41
PDLIM4-201ENST00000253754 UCK2Q9BZX2 261 aa17.61■□□□□ 0.41
PDLIM4-201ENST00000253754 KIR3DX1Q9H7L2 352 aa17.61■□□□□ 0.41
PDLIM4-201ENST00000253754 LMAN1LQ9HAT1 526 aa17.61■□□□□ 0.41
PDLIM4-201ENST00000253754 EQTNQ9NQ60 294 aa17.61■□□□□ 0.41
PDLIM4-201ENST00000253754 C2orf42Q9NWW7 574 aa17.61■□□□□ 0.41
PDLIM4-201ENST00000253754 ZNF624Q9P2J8 865 aaPredicted RBP17.61■□□□□ 0.41
PDLIM4-201ENST00000253754 DSPPQ9NZW4 1301 aa17.61■□□□□ 0.41
PDLIM4-201ENST00000253754 EFCAB9A8MZ26 197 aa17.61■□□□□ 0.41
PDLIM4-201ENST00000253754 GADD45AP24522 165 aa17.61■□□□□ 0.41
PDLIM4-201ENST00000253754 GRK5P34947 590 aa17.61■□□□□ 0.41
PDLIM4-201ENST00000253754 PSMD7P51665 324 aa17.61■□□□□ 0.41
PDLIM4-201ENST00000253754 ITGADQ13349 1161 aa17.61■□□□□ 0.41
PDLIM4-201ENST00000253754 DOC2BQ14184 412 aa17.61■□□□□ 0.41
PDLIM4-201ENST00000253754 LSRQ86X29 649 aaPredicted RBP17.61■□□□□ 0.41
PDLIM4-201ENST00000253754 MFSD9Q8NBP5 474 aa17.61■□□□□ 0.41
PDLIM4-201ENST00000253754 OR9A2Q8NGT5 310 aa17.61■□□□□ 0.41
PDLIM4-201ENST00000253754 ROGDIQ9GZN7 287 aa17.61■□□□□ 0.41
PDLIM4-201ENST00000253754 POLMQ9NP87 494 aaPredicted RBP17.61■□□□□ 0.41
PDLIM4-201ENST00000253754 CES1P1Q9UKY3 287 aa17.61■□□□□ 0.41
PDLIM4-201ENST00000253754 A4GNTQ9UNA3 340 aa17.61■□□□□ 0.41
PDLIM4-201ENST00000253754 SERPINB7O75635 380 aa17.6■□□□□ 0.41
PDLIM4-201ENST00000253754 ADAP00813 363 aa17.6■□□□□ 0.41
PDLIM4-201ENST00000253754 F3P13726 295 aa17.6■□□□□ 0.41
PDLIM4-201ENST00000253754 MC3RP41968 323 aa17.6■□□□□ 0.41
PDLIM4-201ENST00000253754 KHKP50053 298 aa17.6■□□□□ 0.41
PDLIM4-201ENST00000253754 BTN3A2P78410 334 aa17.6■□□□□ 0.41
PDLIM4-201ENST00000253754 LTB4RQ15722 352 aa17.6■□□□□ 0.41
PDLIM4-201ENST00000253754 SOWAHCQ53LP3 525 aaPredicted RBP17.6■□□□□ 0.41
PDLIM4-201ENST00000253754 PGBD2Q6P3X8 592 aa17.6■□□□□ 0.41
PDLIM4-201ENST00000253754 VN1R4Q7Z5H5 301 aa17.6■□□□□ 0.41
PDLIM4-201ENST00000253754 ADCK1Q86TW2 530 aa17.6■□□□□ 0.41
PDLIM4-201ENST00000253754 SNRNP27Q8WVK2 155 aaKnown RBP17.6■□□□□ 0.41
PDLIM4-201ENST00000253754 DHRS1Q96LJ7 313 aa17.6■□□□□ 0.41
PDLIM4-201ENST00000253754 TMEM168Q9H0V1 697 aa17.6■□□□□ 0.41
PDLIM4-201ENST00000253754 C6orf106Q9H6K1 298 aaPredicted RBP17.6■□□□□ 0.41
PDLIM4-201ENST00000253754 CHCHD3Q9NX63 227 aaKnown RBP17.6■□□□□ 0.41
PDLIM4-201ENST00000253754 ENTPD4Q9Y227 616 aa17.6■□□□□ 0.41
PDLIM4-201ENST00000253754 COLEC10Q9Y6Z7 277 aa17.6■□□□□ 0.41
PDLIM4-201ENST00000253754 LRRC72A6NJI9 287 aa17.6■□□□□ 0.41
PDLIM4-201ENST00000253754 CLDN24A6NM45 220 aa17.6■□□□□ 0.41
PDLIM4-201ENST00000253754 KCNJ13O60928 360 aa17.6■□□□□ 0.41
PDLIM4-201ENST00000253754 PPP2R1BP30154 601 aa17.6■□□□□ 0.41
PDLIM4-201ENST00000253754 SLC48A1Q6P1K1 146 aa17.6■□□□□ 0.41
PDLIM4-201ENST00000253754 OR6T1Q8NGN1 323 aa17.6■□□□□ 0.41
PDLIM4-201ENST00000253754 FCGR1BQ92637 280 aa17.6■□□□□ 0.41
PDLIM4-201ENST00000253754 PRR14Q9BWN1 585 aa17.6■□□□□ 0.41
PDLIM4-201ENST00000253754 KLHL25Q9H0H3 589 aa17.6■□□□□ 0.41
PDLIM4-201ENST00000253754 RNF167Q9H6Y7 350 aa17.6■□□□□ 0.41
PDLIM4-201ENST00000253754 AKIP1Q9NQ31 210 aa17.6■□□□□ 0.41
PDLIM4-201ENST00000253754 KNL1Q8NG31 2342 aa17.6■□□□□ 0.41
PDLIM4-201ENST00000253754 H3BN98 237 aa17.59■□□□□ 0.41
PDLIM4-201ENST00000253754 FAAHO00519 579 aa17.59■□□□□ 0.41
PDLIM4-201ENST00000253754 AIREO43918 545 aa17.59■□□□□ 0.41
PDLIM4-201ENST00000253754 UGT2B17O75795 530 aa17.59■□□□□ 0.41
PDLIM4-201ENST00000253754 HSMCR30P0CW71 290 aa17.59■□□□□ 0.41
PDLIM4-201ENST00000253754 OSMP13725 252 aa17.59■□□□□ 0.41
PDLIM4-201ENST00000253754 BUD31P41223 144 aaPredicted RBP17.59■□□□□ 0.41
PDLIM4-201ENST00000253754 ACTR1BP42025 376 aa17.59■□□□□ 0.41
PDLIM4-201ENST00000253754 ACTR1AP61163 376 aa17.59■□□□□ 0.41
PDLIM4-201ENST00000253754 TARDBPQ13148 414 aaKnown RBP eCLIP17.59■□□□□ 0.41
PDLIM4-201ENST00000253754 UBXN2BQ14CS0 331 aa17.59■□□□□ 0.41
PDLIM4-201ENST00000253754 DGUOKQ16854 277 aa17.59■□□□□ 0.41
PDLIM4-201ENST00000253754 BCDIN3DQ7Z5W3 292 aaKnown RBP17.59■□□□□ 0.41
PDLIM4-201ENST00000253754 MEX3DQ86XN8 651 aaKnown RBP17.59■□□□□ 0.41
PDLIM4-201ENST00000253754 KAT2AQ92830 837 aa17.59■□□□□ 0.41
PDLIM4-201ENST00000253754 BMFQ96LC9 184 aa17.59■□□□□ 0.41
PDLIM4-201ENST00000253754 FUZQ9BT04 418 aa17.59■□□□□ 0.41
PDLIM4-201ENST00000253754 ACAD8Q9UKU7 415 aa17.59■□□□□ 0.41
PDLIM4-201ENST00000253754 BDP1A6H8Y1 2624 aa17.59■□□□□ 0.41
PDLIM4-201ENST00000253754 CLDN25C9JDP6 229 aa17.59■□□□□ 0.41
PDLIM4-201ENST00000253754 PROM1O43490 865 aa17.59■□□□□ 0.41
PDLIM4-201ENST00000253754 ENTPD6O75354 484 aa17.59■□□□□ 0.41
PDLIM4-201ENST00000253754 ZNF888P0CJ79 500 aaPredicted RBP17.59■□□□□ 0.41
PDLIM4-201ENST00000253754 CLK1P49759 484 aaKnown RBP17.59■□□□□ 0.41
PDLIM4-201ENST00000253754 GPAT3Q53EU6 434 aa17.59■□□□□ 0.41
PDLIM4-201ENST00000253754 PODNL1Q6PEZ8 512 aa17.59■□□□□ 0.41
PDLIM4-201ENST00000253754 PAQR7Q86WK9 346 aa17.59■□□□□ 0.41
PDLIM4-201ENST00000253754 TRIM69Q86WT6 500 aa17.59■□□□□ 0.41
PDLIM4-201ENST00000253754 KRT73Q86Y46 540 aa17.59■□□□□ 0.41
PDLIM4-201ENST00000253754 SHISA5Q8N114 240 aa17.59■□□□□ 0.41
PDLIM4-201ENST00000253754 ZNF687Q8N1G0 1237 aa17.59■□□□□ 0.41
PDLIM4-201ENST00000253754 IQCF1Q8N6M8 205 aa17.59■□□□□ 0.41
PDLIM4-201ENST00000253754 RASSF5Q8WWW0 418 aa17.59■□□□□ 0.41
PDLIM4-201ENST00000253754 ZG16BQ96DA0 208 aa17.59■□□□□ 0.41
PDLIM4-201ENST00000253754 ZHX1-C8orf76Q96EF9 292 aa17.59■□□□□ 0.41
PDLIM4-201ENST00000253754 SARGQ9BW04 601 aa17.59■□□□□ 0.41
PDLIM4-201ENST00000253754 SLIRPQ9GZT3 109 aaKnown RBP17.59■□□□□ 0.41
PDLIM4-201ENST00000253754 ZSCAN32Q9NX65 697 aa17.59■□□□□ 0.41
PDLIM4-201ENST00000253754 HEBP2Q9Y5Z4 205 aa17.59■□□□□ 0.41
PDLIM4-201ENST00000253754 KRBA1A5PL33 1030 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms