RNA–Protein interactions for RNA: ENST00000250489.8

TMEM55B-201, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-201ENST00000250489 ITPAQ9BY32 194 aa23.69■■□□□ 1.38
TMEM55B-201ENST00000250489 ROGDIQ9GZN7 287 aa23.69■■□□□ 1.38
TMEM55B-201ENST00000250489 ANKRA2Q9H9E1 313 aa23.69■■□□□ 1.38
TMEM55B-201ENST00000250489 NINQ8N4C6 2090 aa23.68■■□□□ 1.38
TMEM55B-201ENST00000250489 A0A0J9YVX5 310 aa23.68■■□□□ 1.38
TMEM55B-201ENST00000250489 SH3PXD2BA1X283 911 aa23.68■■□□□ 1.38
TMEM55B-201ENST00000250489 MPZL2O60487 215 aa23.68■■□□□ 1.38
TMEM55B-201ENST00000250489 POU1F1P28069 291 aa23.68■■□□□ 1.38
TMEM55B-201ENST00000250489 BMXP51813 675 aa23.68■■□□□ 1.38
TMEM55B-201ENST00000250489 DGKEP52429 567 aa23.68■■□□□ 1.38
TMEM55B-201ENST00000250489 ILKQ13418 452 aa23.68■■□□□ 1.38
TMEM55B-201ENST00000250489 KLHL35Q6PF15 583 aa23.68■■□□□ 1.38
TMEM55B-201ENST00000250489 FIGLAQ6QHK4 219 aa23.68■■□□□ 1.38
TMEM55B-201ENST00000250489 ZCCHC10Q8TBK6 192 aa23.68■■□□□ 1.38
TMEM55B-201ENST00000250489 MS4A12Q9NXJ0 267 aa23.68■■□□□ 1.38
TMEM55B-201ENST00000250489 KCMF1Q9P0J7 381 aa23.68■■□□□ 1.38
TMEM55B-201ENST00000250489 A0A1W2PRQ8 180 aa23.67■■□□□ 1.38
TMEM55B-201ENST00000250489 ASNA1O43681 348 aa23.67■■□□□ 1.38
TMEM55B-201ENST00000250489 BUD31P41223 144 aaPredicted RBP23.67■■□□□ 1.38
TMEM55B-201ENST00000250489 LSM3P62310 102 aaKnown RBP23.67■■□□□ 1.38
TMEM55B-201ENST00000250489 SUZ12Q15022 739 aaKnown RBP23.67■■□□□ 1.38
TMEM55B-201ENST00000250489 SLC22A18ASQ8N1D0 253 aa23.67■■□□□ 1.38
TMEM55B-201ENST00000250489 OR6T1Q8NGN1 323 aa23.67■■□□□ 1.38
TMEM55B-201ENST00000250489 NDNFQ8TB73 568 aa23.67■■□□□ 1.38
TMEM55B-201ENST00000250489 KAT2AQ92830 837 aa23.67■■□□□ 1.38
TMEM55B-201ENST00000250489 SERINC2Q96SA4 455 aa23.67■■□□□ 1.38
TMEM55B-201ENST00000250489 PINK1Q9BXM7 581 aa23.67■■□□□ 1.38
TMEM55B-201ENST00000250489 C6orf106Q9H6K1 298 aaPredicted RBP23.67■■□□□ 1.38
TMEM55B-201ENST00000250489 EQTNQ9NQ60 294 aa23.67■■□□□ 1.38
TMEM55B-201ENST00000250489 USP36Q9P275 1121 aaKnown RBP23.67■■□□□ 1.38
TMEM55B-201ENST00000250489 PHF11Q9UIL8 331 aa23.67■■□□□ 1.38
TMEM55B-201ENST00000250489 PILRAQ9UKJ1 303 aa23.67■■□□□ 1.38
TMEM55B-201ENST00000250489 GOLGA4Q13439 2230 aaKnown RBP23.67■■□□□ 1.38
TMEM55B-201ENST00000250489 GIMAP1-GIMAP5A0A087WTJ2 511 aa23.67■■□□□ 1.38
TMEM55B-201ENST00000250489 CASC3O15234 703 aaKnown RBP23.67■■□□□ 1.38
TMEM55B-201ENST00000250489 STSP08842 583 aa23.67■■□□□ 1.38
TMEM55B-201ENST00000250489 CD36P16671 472 aa23.67■■□□□ 1.38
TMEM55B-201ENST00000250489 CPN2P22792 545 aa23.67■■□□□ 1.38
TMEM55B-201ENST00000250489 PTCHD4Q6ZW05 846 aa23.67■■□□□ 1.38
TMEM55B-201ENST00000250489 ABI3BPQ7Z7G0 1075 aa23.67■■□□□ 1.38
TMEM55B-201ENST00000250489 FAM46DQ8NEK8 389 aa23.67■■□□□ 1.38
TMEM55B-201ENST00000250489 PATE1Q8WXA2 126 aa23.67■■□□□ 1.38
TMEM55B-201ENST00000250489 GIMAP5Q96F15 307 aa23.67■■□□□ 1.38
TMEM55B-201ENST00000250489 ANKMY1Q9P2S6 941 aa23.67■■□□□ 1.38
TMEM55B-201ENST00000250489 SH3D21A4FU49 640 aa23.66■■□□□ 1.38
TMEM55B-201ENST00000250489 CLDN24A6NM45 220 aa23.66■■□□□ 1.38
TMEM55B-201ENST00000250489 TOR1BO14657 336 aa23.66■■□□□ 1.38
TMEM55B-201ENST00000250489 SLITRK5O94991 958 aa23.66■■□□□ 1.38
TMEM55B-201ENST00000250489 TNFP01375 233 aa23.66■■□□□ 1.38
TMEM55B-201ENST00000250489 IGHV4-34P06331 123 aa23.66■■□□□ 1.38
TMEM55B-201ENST00000250489 ALDH4A1P30038 563 aa23.66■■□□□ 1.38
TMEM55B-201ENST00000250489 RABIFP47224 123 aa23.66■■□□□ 1.38
TMEM55B-201ENST00000250489 VBP1P61758 197 aa23.66■■□□□ 1.38
TMEM55B-201ENST00000250489 DEFB134Q4QY38 66 aa23.66■■□□□ 1.38
TMEM55B-201ENST00000250489 PODNL1Q6PEZ8 512 aa23.66■■□□□ 1.38
TMEM55B-201ENST00000250489 STX19Q8N4C7 294 aa23.66■■□□□ 1.38
TMEM55B-201ENST00000250489 GPBAR1Q8TDU6 330 aa23.66■■□□□ 1.38
TMEM55B-201ENST00000250489 ZFPM2Q8WW38 1151 aa23.66■■□□□ 1.38
TMEM55B-201ENST00000250489 SLC38A4Q969I6 547 aa23.66■■□□□ 1.38
TMEM55B-201ENST00000250489 FNDC11Q9BVV2 318 aa23.66■■□□□ 1.38
TMEM55B-201ENST00000250489 KLHL25Q9H0H3 589 aa23.66■■□□□ 1.38
TMEM55B-201ENST00000250489 SLC38A1Q9H2H9 487 aa23.66■■□□□ 1.38
TMEM55B-201ENST00000250489 MAN2C1Q9NTJ4 1040 aa23.66■■□□□ 1.38
TMEM55B-201ENST00000250489 M0R082 166 aa23.65■■□□□ 1.38
TMEM55B-201ENST00000250489 SOX14O95416 240 aa23.65■■□□□ 1.38
TMEM55B-201ENST00000250489 ST3GAL4Q11206 333 aa23.65■■□□□ 1.38
TMEM55B-201ENST00000250489 RUNX2Q13950 521 aa23.65■■□□□ 1.38
TMEM55B-201ENST00000250489 COL19A1Q14993 1142 aa23.65■■□□□ 1.38
TMEM55B-201ENST00000250489 ANKDD1AQ495B1 522 aa23.65■■□□□ 1.38
TMEM55B-201ENST00000250489 SLX4IPQ5VYV7 408 aa23.65■■□□□ 1.38
TMEM55B-201ENST00000250489 LRRC25Q8N386 305 aaPredicted RBP23.65■■□□□ 1.38
TMEM55B-201ENST00000250489 FLCNQ8NFG4 579 aa23.65■■□□□ 1.38
TMEM55B-201ENST00000250489 B3GNT7Q8NFL0 401 aa23.65■■□□□ 1.38
TMEM55B-201ENST00000250489 HSPBAP1Q96EW2 488 aa23.65■■□□□ 1.38
TMEM55B-201ENST00000250489 PRRC1Q96M27 445 aa23.65■■□□□ 1.38
TMEM55B-201ENST00000250489 ACTRT3Q9BYD9 372 aa23.65■■□□□ 1.38
TMEM55B-201ENST00000250489 QRSL1Q9H0R6 528 aaKnown RBP23.65■■□□□ 1.38
TMEM55B-201ENST00000250489 TCEAL2Q9H3H9 227 aaPredicted RBP23.65■■□□□ 1.38
TMEM55B-201ENST00000250489 ZNF576Q9H609 170 aa23.65■■□□□ 1.38
TMEM55B-201ENST00000250489 C11orf16Q9NQ32 467 aa23.65■■□□□ 1.38
TMEM55B-201ENST00000250489 NDOR1Q9UHB4 597 aa23.65■■□□□ 1.38
TMEM55B-201ENST00000250489 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP23.65■■□□□ 1.38
TMEM55B-201ENST00000250489 PRAMEF26H0Y7S4 382 aa23.65■■□□□ 1.38
TMEM55B-201ENST00000250489 TLR4O00206 839 aa23.65■■□□□ 1.38
TMEM55B-201ENST00000250489 IGFBP1P08833 259 aaPredicted RBP23.65■■□□□ 1.38
TMEM55B-201ENST00000250489 LIPAP38571 399 aa23.65■■□□□ 1.38
TMEM55B-201ENST00000250489 NCS1P62166 190 aa23.65■■□□□ 1.38
TMEM55B-201ENST00000250489 IRF3Q14653 427 aa23.65■■□□□ 1.38
TMEM55B-201ENST00000250489 POLR2J3Q9H1A7 115 aaKnown RBP23.65■■□□□ 1.38
TMEM55B-201ENST00000250489 POT1Q9NUX5 634 aa23.65■■□□□ 1.38
TMEM55B-201ENST00000250489 CLN6Q9NWW5 311 aa23.65■■□□□ 1.38
TMEM55B-201ENST00000250489 CPNE7Q9UBL6 633 aa23.65■■□□□ 1.38
TMEM55B-201ENST00000250489 LIPT1Q9Y234 373 aa23.65■■□□□ 1.38
TMEM55B-201ENST00000250489 LOC105369274A0A096LPK9 316 aa23.64■■□□□ 1.38
TMEM55B-201ENST00000250489 LOC102723532A0A0G2JNH3 316 aa23.64■■□□□ 1.38
TMEM55B-201ENST00000250489 URADA6NGE7 173 aa23.64■■□□□ 1.38
TMEM55B-201ENST00000250489 M0R3G1 203 aa23.64■■□□□ 1.38
TMEM55B-201ENST00000250489 C21orf59P57076 290 aa23.64■■□□□ 1.38
TMEM55B-201ENST00000250489 CHRNEQ04844 493 aa23.64■■□□□ 1.38
TMEM55B-201ENST00000250489 TARDBPQ13148 414 aaKnown RBP eCLIP23.64■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms