RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 LGI1O95970 557 aa18.4■□□□□ 0.54
CDC42EP1-201ENST00000249014 CKMT1AP12532 417 aa18.4■□□□□ 0.54
CDC42EP1-201ENST00000249014 MAN2A2P49641 1150 aa18.4■□□□□ 0.54
CDC42EP1-201ENST00000249014 ITPRIPL2Q3MIP1 535 aa18.4■□□□□ 0.54
CDC42EP1-201ENST00000249014 NUDT18Q6ZVK8 323 aa18.4■□□□□ 0.54
CDC42EP1-201ENST00000249014 MINDY2Q8NBR6 621 aa18.4■□□□□ 0.54
CDC42EP1-201ENST00000249014 TRMT61BQ9BVS5 477 aaKnown RBP18.4■□□□□ 0.54
CDC42EP1-201ENST00000249014 QPCTLQ9NXS2 382 aa18.4■□□□□ 0.54
CDC42EP1-201ENST00000249014 CCRL2O00421 344 aa18.4■□□□□ 0.54
CDC42EP1-201ENST00000249014 SLC31A1O15431 190 aa18.4■□□□□ 0.54
CDC42EP1-201ENST00000249014 PBX2P40425 430 aa18.4■□□□□ 0.54
CDC42EP1-201ENST00000249014 ABATP80404 500 aa18.4■□□□□ 0.54
CDC42EP1-201ENST00000249014 CD300CQ08708 224 aa18.4■□□□□ 0.54
CDC42EP1-201ENST00000249014 COL9A2Q14055 689 aaPredicted RBP18.4■□□□□ 0.54
CDC42EP1-201ENST00000249014 TPRG1LQ5T0D9 272 aa18.4■□□□□ 0.54
CDC42EP1-201ENST00000249014 SLC48A1Q6P1K1 146 aa18.4■□□□□ 0.54
CDC42EP1-201ENST00000249014 SLC22A16Q86VW1 577 aa18.4■□□□□ 0.54
CDC42EP1-201ENST00000249014 MORN4Q8NDC4 146 aa18.4■□□□□ 0.54
CDC42EP1-201ENST00000249014 OR4K5Q8NGD3 323 aa18.4■□□□□ 0.54
CDC42EP1-201ENST00000249014 SFXN5Q8TD22 340 aa18.4■□□□□ 0.54
CDC42EP1-201ENST00000249014 SARGQ9BW04 601 aa18.4■□□□□ 0.54
CDC42EP1-201ENST00000249014 SLC9A8Q9Y2E8 581 aa18.4■□□□□ 0.54
CDC42EP1-201ENST00000249014 LINC01565O15544 149 aa18.39■□□□□ 0.53
CDC42EP1-201ENST00000249014 UPK1BO75841 260 aa18.39■□□□□ 0.53
CDC42EP1-201ENST00000249014 EML2O95834 649 aa18.39■□□□□ 0.53
CDC42EP1-201ENST00000249014 F3P13726 295 aa18.39■□□□□ 0.53
CDC42EP1-201ENST00000249014 BUD31P41223 144 aaPredicted RBP18.39■□□□□ 0.53
CDC42EP1-201ENST00000249014 ADPRHP54922 357 aa18.39■□□□□ 0.53
CDC42EP1-201ENST00000249014 ZNF91Q05481 1191 aa18.39■□□□□ 0.53
CDC42EP1-201ENST00000249014 GPAT3Q53EU6 434 aa18.39■□□□□ 0.53
CDC42EP1-201ENST00000249014 IQCHQ86VS3 1027 aa18.39■□□□□ 0.53
CDC42EP1-201ENST00000249014 OR8J1Q8NGP2 316 aa18.39■□□□□ 0.53
CDC42EP1-201ENST00000249014 KLHL6Q8WZ60 621 aa18.39■□□□□ 0.53
CDC42EP1-201ENST00000249014 PRR14Q9BWN1 585 aa18.39■□□□□ 0.53
CDC42EP1-201ENST00000249014 HHATLQ9HCP6 504 aa18.39■□□□□ 0.53
CDC42EP1-201ENST00000249014 ABCB10Q9NRK6 738 aa18.39■□□□□ 0.53
CDC42EP1-201ENST00000249014 TVP23BQ9NYZ1 205 aa18.39■□□□□ 0.53
CDC42EP1-201ENST00000249014 NARSO43776 548 aaKnown RBP18.38■□□□□ 0.53
CDC42EP1-201ENST00000249014 PRKYO43930 277 aa18.38■□□□□ 0.53
CDC42EP1-201ENST00000249014 CSO75390 466 aaKnown RBP18.38■□□□□ 0.53
CDC42EP1-201ENST00000249014 GPX5O75715 221 aa18.38■□□□□ 0.53
CDC42EP1-201ENST00000249014 DNTTP04053 509 aa18.38■□□□□ 0.53
CDC42EP1-201ENST00000249014 CSTF2P33240 577 aaKnown RBP eCLIP18.38■□□□□ 0.53
CDC42EP1-201ENST00000249014 SNRPNP63162 240 aaKnown RBP18.38■□□□□ 0.53
CDC42EP1-201ENST00000249014 MFSD4BQ5TF39 518 aa18.38■□□□□ 0.53
CDC42EP1-201ENST00000249014 ZNF425Q6IV72 752 aa18.38■□□□□ 0.53
CDC42EP1-201ENST00000249014 SYCE2Q6PIF2 218 aa18.38■□□□□ 0.53
CDC42EP1-201ENST00000249014 DGLUCYQ7Z3D6 616 aa18.38■□□□□ 0.53
CDC42EP1-201ENST00000249014 LYSMD2Q8IV50 215 aa18.38■□□□□ 0.53
CDC42EP1-201ENST00000249014 FCRL4Q96PJ5 515 aa18.38■□□□□ 0.53
CDC42EP1-201ENST00000249014 ENTPD4Q9Y227 616 aa18.38■□□□□ 0.53
CDC42EP1-201ENST00000249014 TBC1D3DA0A087WVF3 549 aa18.38■□□□□ 0.53
CDC42EP1-201ENST00000249014 TBC1D3IA0A087WXS9 549 aa18.38■□□□□ 0.53
CDC42EP1-201ENST00000249014 TBC1D3EA0A087X179 549 aa18.38■□□□□ 0.53
CDC42EP1-201ENST00000249014 TBC1D3KA0A087X1G2 549 aa18.38■□□□□ 0.53
CDC42EP1-201ENST00000249014 TBC1D3FA6NER0 549 aaPredicted RBP18.38■□□□□ 0.53
CDC42EP1-201ENST00000249014 TBC1D3LB9A6J9 549 aa18.38■□□□□ 0.53
CDC42EP1-201ENST00000249014 TAF4O00268 1085 aa18.38■□□□□ 0.53
CDC42EP1-201ENST00000249014 PROM1O43490 865 aa18.38■□□□□ 0.53
CDC42EP1-201ENST00000249014 ADAM23O75077 832 aa18.38■□□□□ 0.53
CDC42EP1-201ENST00000249014 FHP07954 510 aa18.38■□□□□ 0.53
CDC42EP1-201ENST00000249014 TBC1D3HP0C7X1 549 aa18.38■□□□□ 0.53
CDC42EP1-201ENST00000249014 SOX3P41225 446 aa18.38■□□□□ 0.53
CDC42EP1-201ENST00000249014 MC3RP41968 323 aa18.38■□□□□ 0.53
CDC42EP1-201ENST00000249014 PPP2CBP62714 309 aa18.38■□□□□ 0.53
CDC42EP1-201ENST00000249014 PPP2CAP67775 309 aa18.38■□□□□ 0.53
CDC42EP1-201ENST00000249014 RHAGQ02094 409 aa18.38■□□□□ 0.53
CDC42EP1-201ENST00000249014 ALDH6A1Q02252 535 aaKnown RBP18.38■□□□□ 0.53
CDC42EP1-201ENST00000249014 TMEM196Q5HYL7 178 aa18.38■□□□□ 0.53
CDC42EP1-201ENST00000249014 MEDAGQ5VYS4 303 aa18.38■□□□□ 0.53
CDC42EP1-201ENST00000249014 TBC1D3GQ6DHY5 549 aa18.38■□□□□ 0.53
CDC42EP1-201ENST00000249014 TBC1D3CQ6IPX1 549 aa18.38■□□□□ 0.53
CDC42EP1-201ENST00000249014 BHLHB9Q6PI77 547 aa18.38■□□□□ 0.53
CDC42EP1-201ENST00000249014 CD300LDQ6UXZ3 194 aa18.38■□□□□ 0.53
CDC42EP1-201ENST00000249014 MEX3DQ86XN8 651 aaKnown RBP18.38■□□□□ 0.53
CDC42EP1-201ENST00000249014 TBC1D3Q8IZP1 549 aaPredicted RBP18.38■□□□□ 0.53
CDC42EP1-201ENST00000249014 CADM3Q8N126 398 aa18.38■□□□□ 0.53
CDC42EP1-201ENST00000249014 SLC34A3Q8N130 599 aa18.38■□□□□ 0.53
CDC42EP1-201ENST00000249014 MFSD9Q8NBP5 474 aa18.38■□□□□ 0.53
CDC42EP1-201ENST00000249014 OR9A2Q8NGT5 310 aa18.38■□□□□ 0.53
CDC42EP1-201ENST00000249014 FAM131CQ96AQ9 280 aa18.38■□□□□ 0.53
CDC42EP1-201ENST00000249014 ZG16BQ96DA0 208 aa18.38■□□□□ 0.53
CDC42EP1-201ENST00000249014 TMEM80Q96HE8 168 aa18.38■□□□□ 0.53
CDC42EP1-201ENST00000249014 PRRC1Q96M27 445 aa18.38■□□□□ 0.53
CDC42EP1-201ENST00000249014 SPATA5L1Q9BVQ7 753 aa18.38■□□□□ 0.53
CDC42EP1-201ENST00000249014 TSSK6Q9BXA6 273 aa18.38■□□□□ 0.53
CDC42EP1-201ENST00000249014 EQTNQ9NQ60 294 aa18.38■□□□□ 0.53
CDC42EP1-201ENST00000249014 DZANK1Q9NVP4 752 aa18.38■□□□□ 0.53
CDC42EP1-201ENST00000249014 TBC1D29Q9UFV1 150 aa18.38■□□□□ 0.53
CDC42EP1-201ENST00000249014 ISM1B1AKI9 464 aa18.37■□□□□ 0.53
CDC42EP1-201ENST00000249014 TBX1O43435 398 aa18.37■□□□□ 0.53
CDC42EP1-201ENST00000249014 KCNJ13O60928 360 aa18.37■□□□□ 0.53
CDC42EP1-201ENST00000249014 GUCY1B2O75343 617 aa18.37■□□□□ 0.53
CDC42EP1-201ENST00000249014 SCG5P05408 212 aa18.37■□□□□ 0.53
CDC42EP1-201ENST00000249014 ALOX5P09917 674 aa18.37■□□□□ 0.53
CDC42EP1-201ENST00000249014 CMPK1P30085 196 aa18.37■□□□□ 0.53
CDC42EP1-201ENST00000249014 NCF4Q15080 339 aa18.37■□□□□ 0.53
CDC42EP1-201ENST00000249014 ACSM5Q6NUN0 579 aa18.37■□□□□ 0.53
CDC42EP1-201ENST00000249014 TUBA3EQ6PEY2 450 aa18.37■□□□□ 0.53
CDC42EP1-201ENST00000249014 KCT2Q8NC54 265 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms