RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 CTSFQ9UBX1 484 aa12.28□□□□□ -0.44
VAMP4-201ENST00000236192 KIDINS220Q9ULH0 1771 aa12.28□□□□□ -0.44
VAMP4-201ENST00000236192 GPR171O14626 319 aa12.28□□□□□ -0.44
VAMP4-201ENST00000236192 ADH1CP00326 375 aa12.28□□□□□ -0.44
VAMP4-201ENST00000236192 UBE2IP63279 158 aaKnown RBP12.28□□□□□ -0.44
VAMP4-201ENST00000236192 ZNF91Q05481 1191 aa12.28□□□□□ -0.44
VAMP4-201ENST00000236192 TDGQ13569 410 aa12.28□□□□□ -0.44
VAMP4-201ENST00000236192 TUSC1Q2TAM9 212 aa12.28□□□□□ -0.44
VAMP4-201ENST00000236192 GTDC1Q4AE62 458 aa12.28□□□□□ -0.44
VAMP4-201ENST00000236192 SLC27A4Q6P1M0 643 aa12.28□□□□□ -0.44
VAMP4-201ENST00000236192 KIAA1324Q6UXG2 1013 aaKnown RBP12.28□□□□□ -0.44
VAMP4-201ENST00000236192 SP8Q8IXZ3 490 aa12.28□□□□□ -0.44
VAMP4-201ENST00000236192 NLGN4YQ8NFZ3 816 aaPredicted RBP12.28□□□□□ -0.44
VAMP4-201ENST00000236192 OR8S1Q8NH09 359 aa12.28□□□□□ -0.44
VAMP4-201ENST00000236192 PROKR1Q8TCW9 393 aa12.28□□□□□ -0.44
VAMP4-201ENST00000236192 RAET1EQ8TD07 263 aa12.28□□□□□ -0.44
VAMP4-201ENST00000236192 BCO2Q9BYV7 579 aa12.28□□□□□ -0.44
VAMP4-201ENST00000236192 KCNJ16Q9NPI9 418 aa12.28□□□□□ -0.44
VAMP4-201ENST00000236192 GTF2IRD1Q9UHL9 959 aa12.28□□□□□ -0.44
VAMP4-201ENST00000236192 WTIPA6NIX2 430 aaPredicted RBP12.27□□□□□ -0.44
VAMP4-201ENST00000236192 EIF1AYO14602 144 aaKnown RBP12.27□□□□□ -0.44
VAMP4-201ENST00000236192 LATS1O95835 1130 aa12.27□□□□□ -0.44
VAMP4-201ENST00000236192 AHCYP23526 432 aa12.27□□□□□ -0.44
VAMP4-201ENST00000236192 EDNRAP25101 427 aa12.27□□□□□ -0.44
VAMP4-201ENST00000236192 PTGER3P43115 390 aa12.27□□□□□ -0.44
VAMP4-201ENST00000236192 EIF1AXP47813 144 aaKnown RBP12.27□□□□□ -0.44
VAMP4-201ENST00000236192 ZNF33AQ06730 810 aa12.27□□□□□ -0.44
VAMP4-201ENST00000236192 MFSD13AQ14CX5 517 aa12.27□□□□□ -0.44
VAMP4-201ENST00000236192 SOWAHAQ2M3V2 549 aa12.27□□□□□ -0.44
VAMP4-201ENST00000236192 TSSK4Q6SA08 328 aa12.27□□□□□ -0.44
VAMP4-201ENST00000236192 IL17RCQ8NAC3 791 aa12.27□□□□□ -0.44
VAMP4-201ENST00000236192 WDR20Q8TBZ3 569 aa12.27□□□□□ -0.44
VAMP4-201ENST00000236192 CLEC4CQ8WTT0 213 aa12.27□□□□□ -0.44
VAMP4-201ENST00000236192 NECAB3Q96P71 396 aaPredicted RBP12.27□□□□□ -0.44
VAMP4-201ENST00000236192 PGLYRP2Q96PD5 576 aa12.27□□□□□ -0.44
VAMP4-201ENST00000236192 CDCA4Q9BXL8 241 aa12.27□□□□□ -0.44
VAMP4-201ENST00000236192 THSD1Q9NS62 852 aa12.27□□□□□ -0.44
VAMP4-201ENST00000236192 SGK494L7N484 410 aa12.27□□□□□ -0.44
VAMP4-201ENST00000236192 DSCR3O14972 297 aa12.27□□□□□ -0.44
VAMP4-201ENST00000236192 CHATP28329 748 aa12.27□□□□□ -0.44
VAMP4-201ENST00000236192 CCR6P51684 374 aa12.27□□□□□ -0.44
VAMP4-201ENST00000236192 CDKN2DP55273 166 aa12.27□□□□□ -0.44
VAMP4-201ENST00000236192 RPS25P62851 125 aaKnown RBP12.27□□□□□ -0.44
VAMP4-201ENST00000236192 RBBP4Q09028 425 aa12.27□□□□□ -0.44
VAMP4-201ENST00000236192 RAB40BQ12829 278 aa12.27□□□□□ -0.44
VAMP4-201ENST00000236192 ABRAXAS2Q15018 415 aa12.27□□□□□ -0.44
VAMP4-201ENST00000236192 OR4D1Q15615 310 aa12.27□□□□□ -0.44
VAMP4-201ENST00000236192 PRPF38BQ5VTL8 546 aaKnown RBP12.27□□□□□ -0.44
VAMP4-201ENST00000236192 ZNF627Q7L945 461 aa12.27□□□□□ -0.44
VAMP4-201ENST00000236192 GALNT10Q86SR1 603 aa12.27□□□□□ -0.44
VAMP4-201ENST00000236192 OR2L5Q8NG80 312 aa12.27□□□□□ -0.44
VAMP4-201ENST00000236192 STK35Q8TDR2 534 aa12.27□□□□□ -0.44
VAMP4-201ENST00000236192 SEPT5Q99719 369 aaPredicted RBP12.27□□□□□ -0.44
VAMP4-201ENST00000236192 MICU1Q9BPX6 476 aa12.27□□□□□ -0.44
VAMP4-201ENST00000236192 DPH2Q9BQC3 489 aaPredicted RBP12.27□□□□□ -0.44
VAMP4-201ENST00000236192 FBXL4Q9UKA2 621 aa12.27□□□□□ -0.44
VAMP4-201ENST00000236192 RASD1Q9Y272 281 aa12.27□□□□□ -0.44
VAMP4-201ENST00000236192 PQLC2LA1A4F0 135 aa12.27□□□□□ -0.45
VAMP4-201ENST00000236192 TRABD2BA6NFA1 517 aa12.27□□□□□ -0.45
VAMP4-201ENST00000236192 KHNYNO15037 678 aaKnown RBP12.27□□□□□ -0.45
VAMP4-201ENST00000236192 SCAMP1O15126 338 aa12.27□□□□□ -0.45
VAMP4-201ENST00000236192 FZD7O75084 574 aa12.27□□□□□ -0.45
VAMP4-201ENST00000236192 RHOCP08134 193 aa12.27□□□□□ -0.45
VAMP4-201ENST00000236192 MLLT1Q03111 559 aaPredicted RBP12.27□□□□□ -0.45
VAMP4-201ENST00000236192 EFEMP1Q12805 493 aa12.27□□□□□ -0.45
VAMP4-201ENST00000236192 VEZF1Q14119 521 aa12.27□□□□□ -0.45
VAMP4-201ENST00000236192 FAM26DQ5JW98 314 aa12.27□□□□□ -0.45
VAMP4-201ENST00000236192 SMARCD3Q6STE5 483 aa12.27□□□□□ -0.45
VAMP4-201ENST00000236192 KLHL24Q6TFL4 600 aa12.27□□□□□ -0.45
VAMP4-201ENST00000236192 GID4Q8IVV7 300 aa12.27□□□□□ -0.45
VAMP4-201ENST00000236192 NPAS3Q8IXF0 933 aa12.27□□□□□ -0.45
VAMP4-201ENST00000236192 MYLIPQ8WY64 445 aa12.27□□□□□ -0.45
VAMP4-201ENST00000236192 NDRG1Q92597 394 aaKnown RBP12.27□□□□□ -0.45
VAMP4-201ENST00000236192 TAAR8Q969N4 342 aa12.27□□□□□ -0.45
VAMP4-201ENST00000236192 TMEM159Q96B96 161 aa12.27□□□□□ -0.45
VAMP4-201ENST00000236192 OSMRQ99650 979 aa12.27□□□□□ -0.45
VAMP4-201ENST00000236192 GAR1Q9NY12 217 aaKnown RBP12.27□□□□□ -0.45
VAMP4-201ENST00000236192 CSN2P05814 226 aa12.27□□□□□ -0.45
VAMP4-201ENST00000236192 ITPKAP23677 461 aa12.27□□□□□ -0.45
VAMP4-201ENST00000236192 RPIAP49247 311 aa12.27□□□□□ -0.45
VAMP4-201ENST00000236192 SLC11A2P49281 568 aa12.27□□□□□ -0.45
VAMP4-201ENST00000236192 HBMQ6B0K9 141 aa12.27□□□□□ -0.45
VAMP4-201ENST00000236192 RAD51AP1Q96B01 352 aa12.27□□□□□ -0.45
VAMP4-201ENST00000236192 ZBED6CLQ96FA7 236 aaPredicted RBP12.27□□□□□ -0.45
VAMP4-201ENST00000236192 MARVELD1Q9BSK0 173 aa12.27□□□□□ -0.45
VAMP4-201ENST00000236192 ZCCHC2Q9C0B9 1178 aaKnown RBP12.27□□□□□ -0.45
VAMP4-201ENST00000236192 RIPK3Q9Y572 518 aa12.27□□□□□ -0.45
VAMP4-201ENST00000236192 NME7Q9Y5B8 376 aa12.27□□□□□ -0.45
VAMP4-201ENST00000236192 IGKV6D-41A0A0C4DH26 115 aa12.26□□□□□ -0.45
VAMP4-201ENST00000236192 M0R082 166 aa12.26□□□□□ -0.45
VAMP4-201ENST00000236192 AGPAT2O15120 278 aa12.26□□□□□ -0.45
VAMP4-201ENST00000236192 OR1I1O60431 355 aa12.26□□□□□ -0.45
VAMP4-201ENST00000236192 RAD1O60671 282 aa12.26□□□□□ -0.45
VAMP4-201ENST00000236192 ENDOD1O94919 500 aa12.26□□□□□ -0.45
VAMP4-201ENST00000236192 FDXRP22570 491 aa12.26□□□□□ -0.45
VAMP4-201ENST00000236192 AQP2P41181 271 aa12.26□□□□□ -0.45
VAMP4-201ENST00000236192 SLC19A1P41440 591 aa12.26□□□□□ -0.45
VAMP4-201ENST00000236192 CLDN8P56748 225 aa12.26□□□□□ -0.45
VAMP4-201ENST00000236192 FABP9Q0Z7S8 132 aa12.26□□□□□ -0.45
VAMP4-201ENST00000236192 GRHL2Q6ISB3 625 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms