RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 HUS1BQ8NHY5 278 aa12.62□□□□□ -0.39
COL1A1-201ENST00000225964 BMFQ96LC9 184 aa12.62□□□□□ -0.39
COL1A1-201ENST00000225964 RANBP3Q9H6Z4 567 aaPredicted RBP12.62□□□□□ -0.39
COL1A1-201ENST00000225964 PCDHB10Q9UN67 800 aa12.62□□□□□ -0.39
COL1A1-201ENST00000225964 ANHXE9PGG2 379 aa12.62□□□□□ -0.39
COL1A1-201ENST00000225964 NPC1O15118 1278 aa12.62□□□□□ -0.39
COL1A1-201ENST00000225964 SOX30O94993 753 aa12.62□□□□□ -0.39
COL1A1-201ENST00000225964 ZNF888P0CJ79 500 aaPredicted RBP12.62□□□□□ -0.39
COL1A1-201ENST00000225964 MAP2K4P45985 399 aa12.62□□□□□ -0.39
COL1A1-201ENST00000225964 PXNP49023 591 aaPredicted RBP12.62□□□□□ -0.39
COL1A1-201ENST00000225964 NIPAL4Q0D2K0 466 aa12.62□□□□□ -0.39
COL1A1-201ENST00000225964 MELKQ14680 651 aa12.62□□□□□ -0.39
COL1A1-201ENST00000225964 ARHGAP11AQ6P4F7 1023 aa12.62□□□□□ -0.39
COL1A1-201ENST00000225964 SGCZQ96LD1 299 aa12.62□□□□□ -0.39
COL1A1-201ENST00000225964 PAAF1Q9BRP4 392 aa12.62□□□□□ -0.39
COL1A1-201ENST00000225964 EIF5A2Q9GZV4 153 aaKnown RBP12.62□□□□□ -0.39
COL1A1-201ENST00000225964 STARD5Q9NSY2 213 aa12.62□□□□□ -0.39
COL1A1-201ENST00000225964 MYEF2Q9P2K5 600 aaKnown RBP12.62□□□□□ -0.39
COL1A1-201ENST00000225964 PTRH2Q9Y3E5 179 aaKnown RBP12.62□□□□□ -0.39
COL1A1-201ENST00000225964 LRRC42Q9Y546 428 aa12.62□□□□□ -0.39
COL1A1-201ENST00000225964 DLGAP1O14490 977 aa12.62□□□□□ -0.39
COL1A1-201ENST00000225964 DRD2P14416 443 aa12.62□□□□□ -0.39
COL1A1-201ENST00000225964 AKR1C4P17516 323 aa12.62□□□□□ -0.39
COL1A1-201ENST00000225964 CELP19835 753 aa12.62□□□□□ -0.39
COL1A1-201ENST00000225964 HNRNPA2B1P22626 353 aaKnown RBP12.62□□□□□ -0.39
COL1A1-201ENST00000225964 TAS2R38P59533 333 aa12.62□□□□□ -0.39
COL1A1-201ENST00000225964 C3orf38Q5JPI3 329 aa12.62□□□□□ -0.39
COL1A1-201ENST00000225964 PSAPL1Q6NUJ1 521 aa12.62□□□□□ -0.39
COL1A1-201ENST00000225964 MAMDC2Q7Z304 686 aaPredicted RBP12.62□□□□□ -0.39
COL1A1-201ENST00000225964 SERINC5Q86VE9 423 aa12.62□□□□□ -0.39
COL1A1-201ENST00000225964 TMEM25Q86YD3 366 aa12.62□□□□□ -0.39
COL1A1-201ENST00000225964 CNIH3Q8TBE1 160 aa12.62□□□□□ -0.39
COL1A1-201ENST00000225964 C7orf34Q96L11 122 aa12.62□□□□□ -0.39
COL1A1-201ENST00000225964 PTGDR2Q9Y5Y4 395 aa12.62□□□□□ -0.39
COL1A1-201ENST00000225964 SNED1Q8TER0 1413 aa12.62□□□□□ -0.39
COL1A1-201ENST00000225964 AGAP5A6NIR3 686 aa12.62□□□□□ -0.39
COL1A1-201ENST00000225964 HTR3BO95264 441 aa12.62□□□□□ -0.39
COL1A1-201ENST00000225964 GCGRP47871 477 aa12.62□□□□□ -0.39
COL1A1-201ENST00000225964 CDKN2DP55273 166 aa12.62□□□□□ -0.39
COL1A1-201ENST00000225964 NTHL1P78549 312 aa12.62□□□□□ -0.39
COL1A1-201ENST00000225964 MTFR2Q6P444 385 aa12.62□□□□□ -0.39
COL1A1-201ENST00000225964 TIFABQ6ZNK6 161 aa12.62□□□□□ -0.39
COL1A1-201ENST00000225964 SLC16A9Q7RTY1 509 aa12.62□□□□□ -0.39
COL1A1-201ENST00000225964 LHFPL3Q86UP9 236 aa12.62□□□□□ -0.39
COL1A1-201ENST00000225964 ARL14Q8N4G2 192 aa12.62□□□□□ -0.39
COL1A1-201ENST00000225964 LPAR4Q99677 370 aa12.62□□□□□ -0.39
COL1A1-201ENST00000225964 FBRSQ9HAH7 460 aa12.62□□□□□ -0.39
COL1A1-201ENST00000225964 NAALAD2Q9Y3Q0 740 aa12.62□□□□□ -0.39
COL1A1-201ENST00000225964 FMN2Q9NZ56 1722 aa12.62□□□□□ -0.39
COL1A1-201ENST00000225964 A8MV72 311 aaPredicted RBP12.62□□□□□ -0.39
COL1A1-201ENST00000225964 PNMTP11086 282 aa12.62□□□□□ -0.39
COL1A1-201ENST00000225964 SLC18A1P54219 525 aa12.62□□□□□ -0.39
COL1A1-201ENST00000225964 SF3B4Q15427 424 aaKnown RBP eCLIP12.62□□□□□ -0.39
COL1A1-201ENST00000225964 CCDC58Q4VC31 144 aa12.62□□□□□ -0.39
COL1A1-201ENST00000225964 NANOGP8Q6NSW7 305 aa12.62□□□□□ -0.39
COL1A1-201ENST00000225964 TMEM53Q6P2H8 277 aa12.62□□□□□ -0.39
COL1A1-201ENST00000225964 LRRN1Q6UXK5 716 aa12.62□□□□□ -0.39
COL1A1-201ENST00000225964 KLBQ86Z14 1044 aa12.62□□□□□ -0.39
COL1A1-201ENST00000225964 KLHDC8AQ8IYD2 350 aa12.62□□□□□ -0.39
COL1A1-201ENST00000225964 SPTSSAQ969W0 71 aa12.62□□□□□ -0.39
COL1A1-201ENST00000225964 C16orf70Q9BSU1 422 aa12.62□□□□□ -0.39
COL1A1-201ENST00000225964 CRB3Q9BUF7 120 aa12.62□□□□□ -0.39
COL1A1-201ENST00000225964 NANOGQ9H9S0 305 aa12.62□□□□□ -0.39
COL1A1-201ENST00000225964 KCMF1Q9P0J7 381 aa12.62□□□□□ -0.39
COL1A1-201ENST00000225964 NENFQ9UMX5 172 aa12.62□□□□□ -0.39
COL1A1-201ENST00000225964 CAMK2AQ9UQM7 478 aa12.62□□□□□ -0.39
COL1A1-201ENST00000225964 A0A0G2JMP0 313 aa12.61□□□□□ -0.39
COL1A1-201ENST00000225964 H3BQ06 376 aaPredicted RBP12.61□□□□□ -0.39
COL1A1-201ENST00000225964 NPR2P20594 1047 aa12.61□□□□□ -0.39
COL1A1-201ENST00000225964 GRB7Q14451 532 aa12.61□□□□□ -0.39
COL1A1-201ENST00000225964 SPATS1Q496A3 300 aa12.61□□□□□ -0.39
COL1A1-201ENST00000225964 FCRLBQ6BAA4 426 aa12.61□□□□□ -0.39
COL1A1-201ENST00000225964 SHISA6Q6ZSJ9 500 aa12.61□□□□□ -0.39
COL1A1-201ENST00000225964 ZNF572Q7Z3I7 529 aaPredicted RBP12.61□□□□□ -0.39
COL1A1-201ENST00000225964 ANKK1Q8NFD2 765 aa12.61□□□□□ -0.39
COL1A1-201ENST00000225964 OR4M2Q8NGB6 313 aa12.61□□□□□ -0.39
COL1A1-201ENST00000225964 DPH2Q9BQC3 489 aaPredicted RBP12.61□□□□□ -0.39
COL1A1-201ENST00000225964 WDR6Q9NNW5 1121 aaKnown RBP12.61□□□□□ -0.39
COL1A1-201ENST00000225964 TMEM14AQ9Y6G1 99 aa12.61□□□□□ -0.39
COL1A1-201ENST00000225964 FAM155AB1AL88 458 aaPredicted RBP12.61□□□□□ -0.39
COL1A1-201ENST00000225964 ARSAP15289 507 aa12.61□□□□□ -0.39
COL1A1-201ENST00000225964 EPHA1P21709 976 aa12.61□□□□□ -0.39
COL1A1-201ENST00000225964 DOC2AQ14183 400 aa12.61□□□□□ -0.39
COL1A1-201ENST00000225964 C10orf62Q5T681 223 aaPredicted RBP12.61□□□□□ -0.39
COL1A1-201ENST00000225964 ATG9BQ674R7 924 aa12.61□□□□□ -0.39
COL1A1-201ENST00000225964 Q6ZSR6 202 aa12.61□□□□□ -0.39
COL1A1-201ENST00000225964 IGDCC3Q8IVU1 814 aa12.61□□□□□ -0.39
COL1A1-201ENST00000225964 MAFKO60675 156 aa12.61□□□□□ -0.39
COL1A1-201ENST00000225964 AK1P00568 194 aa12.61□□□□□ -0.39
COL1A1-201ENST00000225964 MT-ND2P03891 347 aa12.61□□□□□ -0.39
COL1A1-201ENST00000225964 TMEM225BP0DP42 221 aa12.61□□□□□ -0.39
COL1A1-201ENST00000225964 TNFSF4P23510 183 aa12.61□□□□□ -0.39
COL1A1-201ENST00000225964 ACY1Q03154 408 aa12.61□□□□□ -0.39
COL1A1-201ENST00000225964 RING1Q06587 406 aa12.61□□□□□ -0.39
COL1A1-201ENST00000225964 RAB11BQ15907 218 aa12.61□□□□□ -0.39
COL1A1-201ENST00000225964 C18orf21Q32NC0 220 aaPredicted RBP12.61□□□□□ -0.39
COL1A1-201ENST00000225964 RTP2Q5QGT7 225 aa12.61□□□□□ -0.39
COL1A1-201ENST00000225964 TSPAN33Q86UF1 283 aa12.61□□□□□ -0.39
COL1A1-201ENST00000225964 GLIS1Q8NBF1 620 aa12.61□□□□□ -0.39
COL1A1-201ENST00000225964 EPOP01588 193 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms