RNA–Protein interactions for RNA: ENST00000225519.3

SHPK-201, Transcript of sedoheptulokinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHPK, Length 3,838 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPK-201ENST00000225519 ERVMER34-1Q9H9K5 563 aa13.47□□□□□ -0.25
SHPK-201ENST00000225519 IMP3Q9NV31 184 aaKnown RBP13.47□□□□□ -0.25
SHPK-201ENST00000225519 HCN3Q9P1Z3 774 aa13.47□□□□□ -0.25
SHPK-201ENST00000225519 ASB4Q9Y574 426 aa13.47□□□□□ -0.25
SHPK-201ENST00000225519 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.47□□□□□ -0.25
SHPK-201ENST00000225519 TRDV1A0A1B0GX56 115 aa13.47□□□□□ -0.25
SHPK-201ENST00000225519 TP53P04637 393 aaPredicted RBP13.47□□□□□ -0.25
SHPK-201ENST00000225519 FAM157BP0CG42 384 aa13.47□□□□□ -0.25
SHPK-201ENST00000225519 SERPINA4P29622 427 aa13.47□□□□□ -0.25
SHPK-201ENST00000225519 CD79BP40259 229 aa13.47□□□□□ -0.25
SHPK-201ENST00000225519 SRP9P49458 86 aaKnown RBP13.47□□□□□ -0.25
SHPK-201ENST00000225519 CCL14Q16627 93 aa13.47□□□□□ -0.25
SHPK-201ENST00000225519 CLLU1Q5K131 121 aa13.47□□□□□ -0.25
SHPK-201ENST00000225519 GPR139Q6DWJ6 353 aa13.47□□□□□ -0.25
SHPK-201ENST00000225519 GRHL2Q6ISB3 625 aa13.47□□□□□ -0.25
SHPK-201ENST00000225519 TCTN3Q6NUS6 607 aa13.47□□□□□ -0.25
SHPK-201ENST00000225519 FTMTQ8N4E7 242 aa13.47□□□□□ -0.25
SHPK-201ENST00000225519 TRPV1Q8NER1 839 aa13.47□□□□□ -0.25
SHPK-201ENST00000225519 OR4K5Q8NGD3 323 aa13.47□□□□□ -0.25
SHPK-201ENST00000225519 FOXJ1Q92949 421 aa13.47□□□□□ -0.25
SHPK-201ENST00000225519 COQ10AQ96MF6 247 aa13.47□□□□□ -0.25
SHPK-201ENST00000225519 OR4K3Q96R72 315 aa13.47□□□□□ -0.25
SHPK-201ENST00000225519 ZFP64Q9NPA5 681 aa13.47□□□□□ -0.25
SHPK-201ENST00000225519 A0A1W2PPL8 197 aa13.47□□□□□ -0.25
SHPK-201ENST00000225519 NPIPB15A6NHN6 443 aaPredicted RBP13.47□□□□□ -0.25
SHPK-201ENST00000225519 QSOX1O00391 747 aa13.47□□□□□ -0.25
SHPK-201ENST00000225519 LANCL1O43813 399 aa13.47□□□□□ -0.25
SHPK-201ENST00000225519 SOD1P00441 154 aa13.47□□□□□ -0.25
SHPK-201ENST00000225519 C1SP09871 688 aa13.47□□□□□ -0.25
SHPK-201ENST00000225519 ACP2P11117 423 aa13.47□□□□□ -0.25
SHPK-201ENST00000225519 PBLDP30039 288 aaPredicted RBP13.47□□□□□ -0.25
SHPK-201ENST00000225519 SLC6A1P30531 599 aa13.47□□□□□ -0.25
SHPK-201ENST00000225519 ACSL1P33121 698 aa13.47□□□□□ -0.25
SHPK-201ENST00000225519 SLC36A4Q6YBV0 504 aa13.47□□□□□ -0.25
SHPK-201ENST00000225519 RASSF6Q6ZTQ3 369 aa13.47□□□□□ -0.25
SHPK-201ENST00000225519 DBF4BQ8NFT6 615 aa13.47□□□□□ -0.25
SHPK-201ENST00000225519 ASZ1Q8WWH4 475 aa13.47□□□□□ -0.25
SHPK-201ENST00000225519 SENP5Q96HI0 755 aaPredicted RBP13.47□□□□□ -0.25
SHPK-201ENST00000225519 ERMAPQ96PL5 475 aaPredicted RBP13.47□□□□□ -0.25
SHPK-201ENST00000225519 C1QTNF6Q9BXI9 259 aa13.47□□□□□ -0.25
SHPK-201ENST00000225519 KCNN2Q9H2S1 579 aa13.47□□□□□ -0.25
SHPK-201ENST00000225519 H2AFY2Q9P0M6 372 aaPredicted RBP13.47□□□□□ -0.25
SHPK-201ENST00000225519 TRPC4Q9UBN4 977 aa13.47□□□□□ -0.25
SHPK-201ENST00000225519 DSPPQ9NZW4 1301 aa13.47□□□□□ -0.25
SHPK-201ENST00000225519 UGDHO60701 494 aa13.46□□□□□ -0.25
SHPK-201ENST00000225519 CATP04040 527 aaKnown RBP13.46□□□□□ -0.25
SHPK-201ENST00000225519 RPL3P39023 403 aaKnown RBP13.46□□□□□ -0.25
SHPK-201ENST00000225519 CDH11P55287 796 aa13.46□□□□□ -0.25
SHPK-201ENST00000225519 RAB40BQ12829 278 aa13.46□□□□□ -0.25
SHPK-201ENST00000225519 MPPE1Q53F39 396 aa13.46□□□□□ -0.25
SHPK-201ENST00000225519 PODNL1Q6PEZ8 512 aa13.46□□□□□ -0.25
SHPK-201ENST00000225519 CFAP77Q6ZQR2 320 aa13.46□□□□□ -0.25
SHPK-201ENST00000225519 GPALPP1Q8IXQ4 340 aa13.46□□□□□ -0.25
SHPK-201ENST00000225519 TOMM5Q8N4H5 51 aa13.46□□□□□ -0.25
SHPK-201ENST00000225519 OR8K5Q8NH50 307 aa13.46□□□□□ -0.25
SHPK-201ENST00000225519 TMEM159Q96B96 161 aa13.46□□□□□ -0.25
SHPK-201ENST00000225519 CACNG6Q9BXT2 260 aa13.46□□□□□ -0.25
SHPK-201ENST00000225519 MVB12BQ9H7P6 319 aa13.46□□□□□ -0.25
SHPK-201ENST00000225519 MBD1Q9UIS9 605 aaPredicted RBP13.46□□□□□ -0.25
SHPK-201ENST00000225519 PRRC2BQ5JSZ5 2229 aaKnown RBP13.46□□□□□ -0.25
SHPK-201ENST00000225519 TMEM129A0AVI4 362 aa13.46□□□□□ -0.25
SHPK-201ENST00000225519 PRODHO43272 600 aa13.46□□□□□ -0.25
SHPK-201ENST00000225519 SGTAO43765 313 aa13.46□□□□□ -0.25
SHPK-201ENST00000225519 STC2O76061 302 aa13.46□□□□□ -0.25
SHPK-201ENST00000225519 PTBP1P26599 531 aaKnown RBP eCLIP13.46□□□□□ -0.257e-6■■■■□ 20.2
SHPK-201ENST00000225519 GIFP27352 417 aa13.46□□□□□ -0.25
SHPK-201ENST00000225519 IRS1P35568 1242 aa13.46□□□□□ -0.25
SHPK-201ENST00000225519 NUP62P37198 522 aaPredicted RBP13.46□□□□□ -0.25
SHPK-201ENST00000225519 SP140Q13342 867 aa13.46□□□□□ -0.25
SHPK-201ENST00000225519 OR4F15Q8NGB8 312 aa13.46□□□□□ -0.25
SHPK-201ENST00000225519 WDR48Q8TAF3 677 aa13.46□□□□□ -0.25
SHPK-201ENST00000225519 ZNF607Q96SK3 696 aa13.46□□□□□ -0.25
SHPK-201ENST00000225519 BRF2Q9HAW0 419 aa13.46□□□□□ -0.25
SHPK-201ENST00000225519 SCML1Q9UN30 329 aa13.46□□□□□ -0.25
SHPK-201ENST00000225519 DNAH12Q6ZR08 3092 aa13.46□□□□□ -0.25
SHPK-201ENST00000225519 M0R3H8 397 aa13.46□□□□□ -0.26
SHPK-201ENST00000225519 COCHO43405 550 aa13.46□□□□□ -0.26
SHPK-201ENST00000225519 MPC1LP0DKB6 136 aa13.46□□□□□ -0.26
SHPK-201ENST00000225519 MANFP55145 182 aaKnown RBP13.46□□□□□ -0.26
SHPK-201ENST00000225519 B4GALNT1Q00973 533 aa13.46□□□□□ -0.26
SHPK-201ENST00000225519 KLBQ86Z14 1044 aa13.46□□□□□ -0.26
SHPK-201ENST00000225519 KLHL36Q8N4N3 616 aa13.46□□□□□ -0.26
SHPK-201ENST00000225519 SECISBP2Q96T21 854 aaKnown RBP13.46□□□□□ -0.26
SHPK-201ENST00000225519 KCNJ15Q99712 375 aa13.46□□□□□ -0.26
SHPK-201ENST00000225519 GSX2Q9BZM3 304 aa13.46□□□□□ -0.26
SHPK-201ENST00000225519 PRR23D1E9PI22 279 aaPredicted RBP13.45□□□□□ -0.26
SHPK-201ENST00000225519 H0YIV9 168 aa13.45□□□□□ -0.26
SHPK-201ENST00000225519 CHST10O43529 356 aa13.45□□□□□ -0.26
SHPK-201ENST00000225519 IGSF6O95976 241 aa13.45□□□□□ -0.26
SHPK-201ENST00000225519 SRPRAP08240 638 aaKnown RBP13.45□□□□□ -0.26
SHPK-201ENST00000225519 PRR23D2P0DMB1 279 aaPredicted RBP13.45□□□□□ -0.26
SHPK-201ENST00000225519 ATP1B2P14415 290 aaPredicted RBP13.45□□□□□ -0.26
SHPK-201ENST00000225519 LCN1P31025 176 aa13.45□□□□□ -0.26
SHPK-201ENST00000225519 FGF9P31371 208 aaPredicted RBP13.45□□□□□ -0.26
SHPK-201ENST00000225519 MAP2K6P52564 334 aa13.45□□□□□ -0.26
SHPK-201ENST00000225519 TSPAN5P62079 268 aa13.45□□□□□ -0.26
SHPK-201ENST00000225519 ZNF33BQ06732 778 aa13.45□□□□□ -0.26
SHPK-201ENST00000225519 HSPB3Q12988 150 aa13.45□□□□□ -0.26
SHPK-201ENST00000225519 HIST2H2AA3Q6FI13 130 aa13.45□□□□□ -0.26
SHPK-201ENST00000225519 PLA2G15Q8NCC3 412 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms