RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 TMEM236Q5W0B7 351 aa10.96□□□□□ -0.66
NOD1-201ENST00000222823 THOC7Q6I9Y2 204 aaKnown RBP10.96□□□□□ -0.66
NOD1-201ENST00000222823 HTR3DQ70Z44 454 aa10.96□□□□□ -0.66
NOD1-201ENST00000222823 UBE2Q1Q7Z7E8 422 aa10.96□□□□□ -0.66
NOD1-201ENST00000222823 SLC5A8Q8N695 610 aa10.96□□□□□ -0.66
NOD1-201ENST00000222823 INO80EQ8NBZ0 244 aaPredicted RBP10.96□□□□□ -0.66
NOD1-201ENST00000222823 ZNF784Q8NCA9 323 aaPredicted RBP10.96□□□□□ -0.66
NOD1-201ENST00000222823 ISG20Q96AZ6 181 aaKnown RBP10.96□□□□□ -0.66
NOD1-201ENST00000222823 RNF38Q9H0F5 515 aa10.96□□□□□ -0.66
NOD1-201ENST00000222823 SRA1Q9HD15 236 aaKnown RBP10.96□□□□□ -0.66
NOD1-201ENST00000222823 VAPAQ9P0L0 249 aa10.96□□□□□ -0.66
NOD1-201ENST00000222823 EXTL2Q9UBQ6 330 aa10.96□□□□□ -0.66
NOD1-201ENST00000222823 HSPE1-MOB4S4R3N1 261 aa10.96□□□□□ -0.66
NOD1-201ENST00000222823 DOCK5Q9H7D0 1870 aa10.95□□□□□ -0.66
NOD1-201ENST00000222823 GXYLT2A0PJZ3 443 aa10.95□□□□□ -0.66
NOD1-201ENST00000222823 UNC119BA6NIH7 251 aa10.95□□□□□ -0.66
NOD1-201ENST00000222823 GPR37L1O60883 481 aa10.95□□□□□ -0.66
NOD1-201ENST00000222823 SEMA3DO95025 777 aa10.95□□□□□ -0.66
NOD1-201ENST00000222823 HOXC13P31276 330 aa10.95□□□□□ -0.66
NOD1-201ENST00000222823 HNRNPKP61978 463 aaKnown RBP eCLIP10.95□□□□□ -0.66
NOD1-201ENST00000222823 ACTC1P68032 377 aa10.95□□□□□ -0.66
NOD1-201ENST00000222823 ACTA1P68133 377 aa10.95□□□□□ -0.66
NOD1-201ENST00000222823 GRIN2CQ14957 1233 aa10.95□□□□□ -0.66
NOD1-201ENST00000222823 GTF2IRD2BQ6EKJ0 949 aa10.95□□□□□ -0.66
NOD1-201ENST00000222823 TTLL10Q6ZVT0 673 aa10.95□□□□□ -0.66
NOD1-201ENST00000222823 GTF2IRD2Q86UP8 949 aa10.95□□□□□ -0.66
NOD1-201ENST00000222823 OR8H3Q8N146 312 aa10.95□□□□□ -0.66
NOD1-201ENST00000222823 NETO1Q8TDF5 533 aa10.95□□□□□ -0.66
NOD1-201ENST00000222823 PHOX2BQ99453 314 aa10.95□□□□□ -0.66
NOD1-201ENST00000222823 RIMS3Q9UJD0 308 aa10.95□□□□□ -0.66
NOD1-201ENST00000222823 TMEM14AQ9Y6G1 99 aa10.95□□□□□ -0.66
NOD1-201ENST00000222823 SLC22A31A6NKX4 558 aa10.95□□□□□ -0.66
NOD1-201ENST00000222823 ADAM12O43184 909 aa10.95□□□□□ -0.66
NOD1-201ENST00000222823 ATP6V1G1O75348 118 aa10.95□□□□□ -0.66
NOD1-201ENST00000222823 IFNA21P01568 189 aa10.95□□□□□ -0.66
NOD1-201ENST00000222823 DCTP40126 519 aa10.95□□□□□ -0.66
NOD1-201ENST00000222823 SHC2P98077 582 aa10.95□□□□□ -0.66
NOD1-201ENST00000222823 LRP8Q14114 963 aa10.95□□□□□ -0.66
NOD1-201ENST00000222823 LRIT3Q3SXY7 679 aa10.95□□□□□ -0.66
NOD1-201ENST00000222823 C1orf94Q6P1W5 598 aa10.95□□□□□ -0.66
NOD1-201ENST00000222823 LIPIQ6XZB0 460 aa10.95□□□□□ -0.66
NOD1-201ENST00000222823 HSD11B1LQ7Z5J1 315 aa10.95□□□□□ -0.66
NOD1-201ENST00000222823 OR56A3Q8NH54 315 aa10.95□□□□□ -0.66
NOD1-201ENST00000222823 INPP5KQ9BT40 448 aa10.95□□□□□ -0.66
NOD1-201ENST00000222823 MROQ9BYG7 248 aa10.95□□□□□ -0.66
NOD1-201ENST00000222823 SLC6A15Q9H2J7 730 aa10.95□□□□□ -0.66
NOD1-201ENST00000222823 C8orf33Q9H7E9 229 aaPredicted RBP10.95□□□□□ -0.66
NOD1-201ENST00000222823 RMI1Q9H9A7 625 aa10.95□□□□□ -0.66
NOD1-201ENST00000222823 FBRSQ9HAH7 460 aa10.95□□□□□ -0.66
NOD1-201ENST00000222823 RDH14Q9HBH5 336 aa10.95□□□□□ -0.66
NOD1-201ENST00000222823 NANSQ9NR45 359 aa10.95□□□□□ -0.66
NOD1-201ENST00000222823 ARMC1Q9NVT9 282 aa10.95□□□□□ -0.66
NOD1-201ENST00000222823 TMEM45AQ9NWC5 275 aa10.95□□□□□ -0.66
NOD1-201ENST00000222823 GPR39O43194 453 aa10.95□□□□□ -0.66
NOD1-201ENST00000222823 TPD52L2O43399 206 aaKnown RBP10.95□□□□□ -0.66
NOD1-201ENST00000222823 C1QAP02745 245 aa10.95□□□□□ -0.66
NOD1-201ENST00000222823 THEGLP0DJG4 465 aa10.95□□□□□ -0.66
NOD1-201ENST00000222823 AK4P27144 223 aaPredicted RBP10.95□□□□□ -0.66
NOD1-201ENST00000222823 PDHA2P29803 388 aa10.95□□□□□ -0.66
NOD1-201ENST00000222823 RGNQ15493 299 aa10.95□□□□□ -0.66
NOD1-201ENST00000222823 LARP4Q71RC2 724 aaKnown RBP eCLIP10.95□□□□□ -0.66
NOD1-201ENST00000222823 CENPSQ8N2Z9 138 aa10.95□□□□□ -0.66
NOD1-201ENST00000222823 SGTBQ96EQ0 304 aa10.95□□□□□ -0.66
NOD1-201ENST00000222823 DHRS1Q96LJ7 313 aa10.95□□□□□ -0.66
NOD1-201ENST00000222823 SMIM14Q96QK8 99 aa10.95□□□□□ -0.66
NOD1-201ENST00000222823 TMEM181Q9P2C4 612 aa10.95□□□□□ -0.66
NOD1-201ENST00000222823 MGAT4AQ9UM21 535 aa10.95□□□□□ -0.66
NOD1-201ENST00000222823 OR2AT4A6NND4 320 aa10.94□□□□□ -0.66
NOD1-201ENST00000222823 SOBPA7XYQ1 873 aa10.94□□□□□ -0.66
NOD1-201ENST00000222823 GSTT2P0CG29 244 aa10.94□□□□□ -0.66
NOD1-201ENST00000222823 SDC1P18827 310 aa10.94□□□□□ -0.66
NOD1-201ENST00000222823 TNFRSF1BP20333 461 aa10.94□□□□□ -0.66
NOD1-201ENST00000222823 DUSP3P51452 185 aaPredicted RBP10.94□□□□□ -0.66
NOD1-201ENST00000222823 CEBPGP53567 150 aa10.94□□□□□ -0.66
NOD1-201ENST00000222823 ZXDBP98169 803 aa10.94□□□□□ -0.66
NOD1-201ENST00000222823 GRM7Q14831 915 aa10.94□□□□□ -0.66
NOD1-201ENST00000222823 DNAJA3Q96EY1 480 aa10.94□□□□□ -0.66
NOD1-201ENST00000222823 TPSD1Q9BZJ3 242 aa10.94□□□□□ -0.66
NOD1-201ENST00000222823 MTHFD2LQ9H903 347 aaPredicted RBP10.94□□□□□ -0.66
NOD1-201ENST00000222823 SUSD2Q9UGT4 822 aa10.94□□□□□ -0.66
NOD1-201ENST00000222823 NUMBLQ9Y6R0 609 aa10.94□□□□□ -0.66
NOD1-201ENST00000222823 ANTXRLA6NF34 631 aa10.94□□□□□ -0.66
NOD1-201ENST00000222823 OR52A4PA6NMU1 304 aa10.94□□□□□ -0.66
NOD1-201ENST00000222823 INMT-MINDY4F8WBC2 141 aa10.94□□□□□ -0.66
NOD1-201ENST00000222823 NUAK1O60285 661 aa10.94□□□□□ -0.66
NOD1-201ENST00000222823 MITFO75030 526 aaPredicted RBP10.94□□□□□ -0.66
NOD1-201ENST00000222823 GPX3P22352 226 aa10.94□□□□□ -0.66
NOD1-201ENST00000222823 HNRNPA2B1P22626 353 aaKnown RBP10.94□□□□□ -0.66
NOD1-201ENST00000222823 CCNOP22674 350 aa10.94□□□□□ -0.66
NOD1-201ENST00000222823 GPR4P46093 362 aa10.94□□□□□ -0.66
NOD1-201ENST00000222823 LBX1P52954 281 aa10.94□□□□□ -0.66
NOD1-201ENST00000222823 WDR5P61964 334 aaKnown RBP10.94□□□□□ -0.66
NOD1-201ENST00000222823 TBC1D25Q3MII6 688 aa10.94□□□□□ -0.66
NOD1-201ENST00000222823 HSD17B12Q53GQ0 312 aa10.94□□□□□ -0.66
NOD1-201ENST00000222823 CEACAM19Q7Z692 300 aa10.94□□□□□ -0.66
NOD1-201ENST00000222823 PLCZ1Q86YW0 608 aa10.94□□□□□ -0.66
NOD1-201ENST00000222823 NEIL2Q969S2 332 aa10.94□□□□□ -0.66
NOD1-201ENST00000222823 NXPE2Q96DL1 559 aa10.94□□□□□ -0.66
NOD1-201ENST00000222823 PEX11GQ96HA9 241 aa10.94□□□□□ -0.66
NOD1-201ENST00000222823 UBXN10Q96LJ8 280 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms