RNA–Protein interactions for RNA: ENST00000221222.15

HOMER3-201, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,384 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-201ENST00000221222 NPAS2Q99743 824 aa21.93■■□□□ 1.1
HOMER3-201ENST00000221222 PTGFRNQ9P2B2 879 aa21.93■■□□□ 1.1
HOMER3-201ENST00000221222 PCDHGB7Q9Y5F8 929 aa21.93■■□□□ 1.1
HOMER3-201ENST00000221222 SPTA1P02549 2419 aa21.93■■□□□ 1.1
HOMER3-201ENST00000221222 TMEM200CA6NKL6 621 aa21.92■■□□□ 1.1
HOMER3-201ENST00000221222 A8MUI8 341 aa21.92■■□□□ 1.1
HOMER3-201ENST00000221222 C9JVG2 144 aa21.92■■□□□ 1.1
HOMER3-201ENST00000221222 ALPPP05187 535 aa21.92■■□□□ 1.1
HOMER3-201ENST00000221222 IL6P05231 212 aa21.92■■□□□ 1.1
HOMER3-201ENST00000221222 PGRP06401 933 aa21.92■■□□□ 1.1
HOMER3-201ENST00000221222 DUSP8Q13202 625 aa21.92■■□□□ 1.1
HOMER3-201ENST00000221222 EXOSC7Q15024 291 aaKnown RBP21.92■■□□□ 1.1
HOMER3-201ENST00000221222 B3GNTL1Q67FW5 361 aaPredicted RBP21.92■■□□□ 1.1
HOMER3-201ENST00000221222 TCTN3Q6NUS6 607 aa21.92■■□□□ 1.1
HOMER3-201ENST00000221222 TMEM107Q6UX40 140 aa21.92■■□□□ 1.1
HOMER3-201ENST00000221222 ISLR2Q6UXK2 745 aa21.92■■□□□ 1.1
HOMER3-201ENST00000221222 SPATA21Q7Z572 469 aa21.92■■□□□ 1.1
HOMER3-201ENST00000221222 RPS19BP1Q86WX3 136 aaKnown RBP21.92■■□□□ 1.1
HOMER3-201ENST00000221222 OR2L13Q8N349 312 aa21.92■■□□□ 1.1
HOMER3-201ENST00000221222 SIMC1Q8NDZ2 872 aa21.92■■□□□ 1.1
HOMER3-201ENST00000221222 OR5L2Q8NGL0 311 aa21.92■■□□□ 1.1
HOMER3-201ENST00000221222 ZNF354BQ96LW1 612 aa21.92■■□□□ 1.1
HOMER3-201ENST00000221222 ELAC2Q9BQ52 826 aaKnown RBP21.92■■□□□ 1.1
HOMER3-201ENST00000221222 RABEP2Q9H5N1 569 aa21.92■■□□□ 1.1
HOMER3-201ENST00000221222 FAM120CQ9NX05 1096 aaKnown RBP21.92■■□□□ 1.1
HOMER3-201ENST00000221222 TEKT2Q9UIF3 430 aa21.92■■□□□ 1.1
HOMER3-201ENST00000221222 ADAM21Q9UKJ8 722 aa21.92■■□□□ 1.1
HOMER3-201ENST00000221222 CFL2Q9Y281 166 aa21.92■■□□□ 1.1
HOMER3-201ENST00000221222 TLN1Q9Y490 2541 aaKnown RBP21.91■■□□□ 1.1
HOMER3-201ENST00000221222 PRSS51A0A1B0GVH4 220 aa21.91■■□□□ 1.1
HOMER3-201ENST00000221222 FAM234BA2RU67 622 aa21.91■■□□□ 1.1
HOMER3-201ENST00000221222 PRAMEF2O60811 474 aa21.91■■□□□ 1.1
HOMER3-201ENST00000221222 SHOX2O60902 331 aaPredicted RBP21.91■■□□□ 1.1
HOMER3-201ENST00000221222 EFNA1P20827 205 aaPredicted RBP21.91■■□□□ 1.1
HOMER3-201ENST00000221222 MC3RP41968 323 aa21.91■■□□□ 1.1
HOMER3-201ENST00000221222 CDK9P50750 372 aaKnown RBP21.91■■□□□ 1.1
HOMER3-201ENST00000221222 DGKQP52824 942 aa21.91■■□□□ 1.1
HOMER3-201ENST00000221222 EBPQ15125 230 aaKnown RBP21.91■■□□□ 1.1
HOMER3-201ENST00000221222 MEP1AQ16819 746 aa21.91■■□□□ 1.1
HOMER3-201ENST00000221222 IGFL2Q6UWQ7 119 aa21.91■■□□□ 1.1
HOMER3-201ENST00000221222 SLC29A4Q7RTT9 530 aa21.91■■□□□ 1.1
HOMER3-201ENST00000221222 VPS37AQ8NEZ2 397 aa21.91■■□□□ 1.1
HOMER3-201ENST00000221222 C16orf52Q8NHV5 167 aa21.91■■□□□ 1.1
HOMER3-201ENST00000221222 LMF1Q96S06 567 aa21.91■■□□□ 1.1
HOMER3-201ENST00000221222 FAM107BQ9H098 131 aa21.91■■□□□ 1.1
HOMER3-201ENST00000221222 NEUROD4Q9HD90 331 aa21.91■■□□□ 1.1
HOMER3-201ENST00000221222 SIRT3Q9NTG7 399 aaPredicted RBP21.91■■□□□ 1.1
HOMER3-201ENST00000221222 MRGBPQ9NV56 204 aa21.91■■□□□ 1.1
HOMER3-201ENST00000221222 NTMQ9P121 344 aa21.91■■□□□ 1.1
HOMER3-201ENST00000221222 BCAP29Q9UHQ4 241 aa21.91■■□□□ 1.1
HOMER3-201ENST00000221222 C19orf53Q9UNZ5 99 aaPredicted RBP21.91■■□□□ 1.1
HOMER3-201ENST00000221222 TNRC6AQ8NDV7 1962 aaKnown RBP21.91■■□□□ 1.1
HOMER3-201ENST00000221222 NUP214P35658 2090 aaPredicted RBP21.91■■□□□ 1.1
HOMER3-201ENST00000221222 UPK1AO00322 258 aa21.9■■□□□ 1.1
HOMER3-201ENST00000221222 SNX3O60493 162 aa21.9■■□□□ 1.1
HOMER3-201ENST00000221222 PSMG1O95456 288 aa21.9■■□□□ 1.1
HOMER3-201ENST00000221222 C6orf47O95873 294 aa21.9■■□□□ 1.1
HOMER3-201ENST00000221222 GPC1P35052 558 aa21.9■■□□□ 1.1
HOMER3-201ENST00000221222 EMDP50402 254 aa21.9■■□□□ 1.1
HOMER3-201ENST00000221222 POLR2JP52435 117 aaKnown RBP21.9■■□□□ 1.1
HOMER3-201ENST00000221222 MLF1P58340 268 aa21.9■■□□□ 1.1
HOMER3-201ENST00000221222 MFAP5Q13361 173 aa21.9■■□□□ 1.1
HOMER3-201ENST00000221222 ACER2Q5QJU3 275 aa21.9■■□□□ 1.1
HOMER3-201ENST00000221222 FUNDC1Q8IVP5 155 aa21.9■■□□□ 1.1
HOMER3-201ENST00000221222 CPSF7Q8N684 471 aaKnown RBP21.9■■□□□ 1.1
HOMER3-201ENST00000221222 OR52R1Q8NGF1 315 aa21.9■■□□□ 1.1
HOMER3-201ENST00000221222 EPN3Q9H201 632 aa21.9■■□□□ 1.1
HOMER3-201ENST00000221222 CDCP1Q9H5V8 836 aa21.9■■□□□ 1.1
HOMER3-201ENST00000221222 ANKRA2Q9H9E1 313 aa21.9■■□□□ 1.1
HOMER3-201ENST00000221222 MYOTQ9UBF9 498 aa21.9■■□□□ 1.1
HOMER3-201ENST00000221222 ZNF451Q9Y4E5 1061 aa21.9■■□□□ 1.1
HOMER3-201ENST00000221222 HBA1P69905 142 aa21.89■■□□□ 1.1
HOMER3-201ENST00000221222 LRRC74AQ0VAA2 488 aa21.89■■□□□ 1.1
HOMER3-201ENST00000221222 RCAN2Q14206 197 aa21.89■■□□□ 1.1
HOMER3-201ENST00000221222 ABHD17BQ5VST6 288 aa21.89■■□□□ 1.1
HOMER3-201ENST00000221222 FCRLBQ6BAA4 426 aa21.89■■□□□ 1.1
HOMER3-201ENST00000221222 BLOC1S3Q6QNY0 202 aa21.89■■□□□ 1.1
HOMER3-201ENST00000221222 MSANTD1Q6ZTZ1 278 aa21.89■■□□□ 1.1
HOMER3-201ENST00000221222 CLECL1Q8IZS7 167 aa21.89■■□□□ 1.1
HOMER3-201ENST00000221222 ZNF441Q8N8Z8 693 aa21.89■■□□□ 1.1
HOMER3-201ENST00000221222 C9orf43Q8TAL5 461 aaPredicted RBP21.89■■□□□ 1.1
HOMER3-201ENST00000221222 THAP3Q8WTV1 239 aaPredicted RBP21.89■■□□□ 1.1
HOMER3-201ENST00000221222 CCDC115Q96NT0 180 aa21.89■■□□□ 1.1
HOMER3-201ENST00000221222 OR52E6Q96RD3 313 aa21.89■■□□□ 1.1
HOMER3-201ENST00000221222 WWTR1Q9GZV5 400 aa21.89■■□□□ 1.1
HOMER3-201ENST00000221222 DDX18Q9NVP1 670 aaKnown RBP21.89■■□□□ 1.1
HOMER3-201ENST00000221222 TAS2R9Q9NYW1 312 aa21.89■■□□□ 1.1
HOMER3-201ENST00000221222 PRODH2Q9UF12 536 aa21.89■■□□□ 1.1
HOMER3-201ENST00000221222 BTNL2Q9UIR0 455 aa21.89■■□□□ 1.1
HOMER3-201ENST00000221222 HEMK1Q9Y5R4 338 aaPredicted RBP21.89■■□□□ 1.1
HOMER3-201ENST00000221222 BOD1L1Q8NFC6 3051 aa21.89■■□□□ 1.1
HOMER3-201ENST00000221222 CDK2AP1O14519 115 aa21.88■■□□□ 1.09
HOMER3-201ENST00000221222 MAN1A2O60476 641 aa21.88■■□□□ 1.09
HOMER3-201ENST00000221222 COQ9O75208 318 aa21.88■■□□□ 1.09
HOMER3-201ENST00000221222 PDGFAP04085 211 aa21.88■■□□□ 1.09
HOMER3-201ENST00000221222 SFTPCP11686 197 aa21.88■■□□□ 1.09
HOMER3-201ENST00000221222 IGFL3Q6UXB1 125 aa21.88■■□□□ 1.09
HOMER3-201ENST00000221222 TMEM64Q6YI46 380 aa21.88■■□□□ 1.09
HOMER3-201ENST00000221222 LINC00696Q6ZRV3 163 aa21.88■■□□□ 1.09
HOMER3-201ENST00000221222 HPS6Q86YV9 775 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms