RNA–Protein interactions for RNA: ENST00000216085.11

RHBDD3-201, Transcript of rhomboid domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHBDD3, Length 1,794 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-201ENST00000216085 RNF4P78317 190 aa18.76■□□□□ 0.59
RHBDD3-201ENST00000216085 UBAP2LQ14157 1087 aaKnown RBP18.76■□□□□ 0.59
RHBDD3-201ENST00000216085 EXOSC7Q15024 291 aaKnown RBP18.76■□□□□ 0.59
RHBDD3-201ENST00000216085 COL28A1Q2UY09 1125 aa18.76■□□□□ 0.59
RHBDD3-201ENST00000216085 MTDHQ86UE4 582 aaKnown RBP18.76■□□□□ 0.59
RHBDD3-201ENST00000216085 CLECL1Q8IZS7 167 aa18.76■□□□□ 0.59
RHBDD3-201ENST00000216085 LGI4Q8N135 537 aa18.76■□□□□ 0.59
RHBDD3-201ENST00000216085 OR2L13Q8N349 312 aa18.76■□□□□ 0.59
RHBDD3-201ENST00000216085 KIF2BQ8N4N8 673 aa18.76■□□□□ 0.59
RHBDD3-201ENST00000216085 OR56A1Q8NGH5 318 aa18.76■□□□□ 0.59
RHBDD3-201ENST00000216085 PSMA8Q8TAA3 256 aa18.76■□□□□ 0.59
RHBDD3-201ENST00000216085 NUBPLQ8TB37 319 aa18.76■□□□□ 0.59
RHBDD3-201ENST00000216085 SFXN5Q8TD22 340 aa18.76■□□□□ 0.59
RHBDD3-201ENST00000216085 BCAS4Q8TDM0 211 aa18.76■□□□□ 0.59
RHBDD3-201ENST00000216085 EXTL1Q92935 676 aa18.76■□□□□ 0.59
RHBDD3-201ENST00000216085 MAGED4Q96JG8 741 aa18.76■□□□□ 0.59
RHBDD3-201ENST00000216085 ZNF354BQ96LW1 612 aa18.76■□□□□ 0.59
RHBDD3-201ENST00000216085 GAL3ST4Q96RP7 486 aa18.76■□□□□ 0.59
RHBDD3-201ENST00000216085 RYDENQ9NUL5 291 aaKnown RBP18.76■□□□□ 0.59
RHBDD3-201ENST00000216085 RFXANKO14593 260 aa18.76■□□□□ 0.59
RHBDD3-201ENST00000216085 DNAJB5O75953 348 aa18.76■□□□□ 0.59
RHBDD3-201ENST00000216085 ANP32DO95626 131 aa18.76■□□□□ 0.59
RHBDD3-201ENST00000216085 CPSF4O95639 269 aaKnown RBP18.76■□□□□ 0.59
RHBDD3-201ENST00000216085 CBX7O95931 251 aa18.76■□□□□ 0.59
RHBDD3-201ENST00000216085 SNRPB2P08579 225 aaKnown RBP18.76■□□□□ 0.59
RHBDD3-201ENST00000216085 POLE2P56282 527 aa18.76■□□□□ 0.59
RHBDD3-201ENST00000216085 HBA1P69905 142 aa18.76■□□□□ 0.59
RHBDD3-201ENST00000216085 C6orf10Q5SRN2 563 aa18.76■□□□□ 0.59
RHBDD3-201ENST00000216085 FUNDC1Q8IVP5 155 aa18.76■□□□□ 0.59
RHBDD3-201ENST00000216085 SIRT6Q8N6T7 355 aa18.76■□□□□ 0.59
RHBDD3-201ENST00000216085 ZNF321PQ8N8H1 164 aa18.76■□□□□ 0.59
RHBDD3-201ENST00000216085 VPS33AQ96AX1 596 aa18.76■□□□□ 0.59
RHBDD3-201ENST00000216085 MS4A4EQ96PG1 132 aa18.76■□□□□ 0.59
RHBDD3-201ENST00000216085 SLC25A23Q9BV35 468 aa18.76■□□□□ 0.59
RHBDD3-201ENST00000216085 ZCCHC3Q9NUD5 404 aaKnown RBP18.76■□□□□ 0.59
RHBDD3-201ENST00000216085 VPS4AQ9UN37 437 aa18.76■□□□□ 0.59
RHBDD3-201ENST00000216085 EPG5Q9HCE0 2579 aa18.75■□□□□ 0.59
RHBDD3-201ENST00000216085 C2orf92A0A1B0GVN3 265 aa18.75■□□□□ 0.59
RHBDD3-201ENST00000216085 A0A1W2PP18 115 aa18.75■□□□□ 0.59
RHBDD3-201ENST00000216085 S1PR1P21453 382 aa18.75■□□□□ 0.59
RHBDD3-201ENST00000216085 ZFP36L2P47974 494 aaKnown RBP18.75■□□□□ 0.59
RHBDD3-201ENST00000216085 DCAF7P61962 342 aa18.75■□□□□ 0.59
RHBDD3-201ENST00000216085 PHC1P78364 1004 aa18.75■□□□□ 0.59
RHBDD3-201ENST00000216085 KLF10Q13118 480 aa18.75■□□□□ 0.59
RHBDD3-201ENST00000216085 ZNHIT3Q15649 155 aaPredicted RBP18.75■□□□□ 0.59
RHBDD3-201ENST00000216085 MEP1AQ16819 746 aa18.75■□□□□ 0.59
RHBDD3-201ENST00000216085 VPS26BQ4G0F5 336 aa18.75■□□□□ 0.59
RHBDD3-201ENST00000216085 ABHD17BQ5VST6 288 aa18.75■□□□□ 0.59
RHBDD3-201ENST00000216085 GK5Q6ZS86 529 aa18.75■□□□□ 0.59
RHBDD3-201ENST00000216085 RPS19BP1Q86WX3 136 aaKnown RBP18.75■□□□□ 0.59
RHBDD3-201ENST00000216085 ZNF615Q8N8J6 731 aa18.75■□□□□ 0.59
RHBDD3-201ENST00000216085 C16orf52Q8NHV5 167 aa18.75■□□□□ 0.59
RHBDD3-201ENST00000216085 CRELD1Q96HD1 420 aa18.75■□□□□ 0.59
RHBDD3-201ENST00000216085 ZNF223Q9UK11 482 aaPredicted RBP18.75■□□□□ 0.59
RHBDD3-201ENST00000216085 NDUFAF1Q9Y375 327 aa18.75■□□□□ 0.59
RHBDD3-201ENST00000216085 PCDHGA9Q9Y5G4 932 aaKnown RBP18.75■□□□□ 0.59
RHBDD3-201ENST00000216085 UPK1AO00322 258 aa18.74■□□□□ 0.59
RHBDD3-201ENST00000216085 SCN2BO60939 215 aa18.74■□□□□ 0.59
RHBDD3-201ENST00000216085 CEACAM4O75871 244 aa18.74■□□□□ 0.59
RHBDD3-201ENST00000216085 CCT3P49368 545 aaKnown RBP18.74■□□□□ 0.59
RHBDD3-201ENST00000216085 ZNF155Q12901 538 aaPredicted RBP18.74■□□□□ 0.59
RHBDD3-201ENST00000216085 RAPSNQ13702 412 aa18.74■□□□□ 0.59
RHBDD3-201ENST00000216085 FHL5Q5TD97 284 aa18.74■□□□□ 0.59
RHBDD3-201ENST00000216085 C9orf40Q8IXQ3 194 aa18.74■□□□□ 0.59
RHBDD3-201ENST00000216085 NUP43Q8NFH3 380 aa18.74■□□□□ 0.59
RHBDD3-201ENST00000216085 FDCSPQ8NFU4 85 aa18.74■□□□□ 0.59
RHBDD3-201ENST00000216085 TM9SF4Q92544 642 aa18.74■□□□□ 0.59
RHBDD3-201ENST00000216085 FAM120BQ96EK7 910 aaKnown RBP18.74■□□□□ 0.59
RHBDD3-201ENST00000216085 LRRC37BQ96QE4 947 aa18.74■□□□□ 0.59
RHBDD3-201ENST00000216085 WWTR1Q9GZV5 400 aa18.74■□□□□ 0.59
RHBDD3-201ENST00000216085 EPS8L2Q9H6S3 715 aa18.74■□□□□ 0.59
RHBDD3-201ENST00000216085 CXorf36Q9H7Y0 433 aa18.74■□□□□ 0.59
RHBDD3-201ENST00000216085 LEF1Q9UJU2 399 aaPredicted RBP18.74■□□□□ 0.59
RHBDD3-201ENST00000216085 HEMK1Q9Y5R4 338 aaPredicted RBP18.74■□□□□ 0.59
RHBDD3-201ENST00000216085 TTC36A6NLP5 189 aa18.73■□□□□ 0.59
RHBDD3-201ENST00000216085 KRT16P08779 473 aa18.73■□□□□ 0.59
RHBDD3-201ENST00000216085 TRPC1P48995 793 aa18.73■□□□□ 0.59
RHBDD3-201ENST00000216085 PRKAG1P54619 331 aa18.73■□□□□ 0.59
RHBDD3-201ENST00000216085 PSPHP78330 225 aa18.73■□□□□ 0.59
RHBDD3-201ENST00000216085 TP53BP2Q13625 1128 aa18.73■□□□□ 0.59
RHBDD3-201ENST00000216085 EBPQ15125 230 aaKnown RBP18.73■□□□□ 0.59
RHBDD3-201ENST00000216085 H3F3CQ6NXT2 135 aa18.73■□□□□ 0.59
RHBDD3-201ENST00000216085 ISLR2Q6UXK2 745 aa18.73■□□□□ 0.59
RHBDD3-201ENST00000216085 C17orf47Q8NEP4 570 aa18.73■□□□□ 0.59
RHBDD3-201ENST00000216085 DNAJB8Q8NHS0 232 aa18.73■□□□□ 0.59
RHBDD3-201ENST00000216085 GOT1L1Q8NHS2 421 aaPredicted RBP18.73■□□□□ 0.59
RHBDD3-201ENST00000216085 THAP3Q8WTV1 239 aaPredicted RBP18.73■□□□□ 0.59
RHBDD3-201ENST00000216085 SIRT3Q9NTG7 399 aaPredicted RBP18.73■□□□□ 0.59
RHBDD3-201ENST00000216085 NTMQ9P121 344 aa18.73■□□□□ 0.59
RHBDD3-201ENST00000216085 ARMCX1Q9P291 453 aa18.73■□□□□ 0.59
RHBDD3-201ENST00000216085 PCDHGB7Q9Y5F8 929 aa18.73■□□□□ 0.59
RHBDD3-201ENST00000216085 MGAQ8IWI9 3026 aa18.73■□□□□ 0.59
RHBDD3-201ENST00000216085 RNF103-CHMP3A0A140T963 221 aa18.73■□□□□ 0.59
RHBDD3-201ENST00000216085 BBIP1A8MTZ0 92 aa18.73■□□□□ 0.59
RHBDD3-201ENST00000216085 CLPSP04118 112 aa18.73■□□□□ 0.59
RHBDD3-201ENST00000216085 CAPN3P20807 821 aa18.73■□□□□ 0.59
RHBDD3-201ENST00000216085 UQCRC2P22695 453 aa18.73■□□□□ 0.59
RHBDD3-201ENST00000216085 PRIM2P49643 509 aa18.73■□□□□ 0.59
RHBDD3-201ENST00000216085 NRG3P56975 720 aa18.73■□□□□ 0.59
RHBDD3-201ENST00000216085 GABPB1Q06547 395 aaPredicted RBP18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms