RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 FOXD2O60548 495 aaPredicted RBP7.78□□□□□ -1.16
VAMP3-201ENST00000054666 CNOT3O75175 753 aaKnown RBP7.78□□□□□ -1.16
VAMP3-201ENST00000054666 SOX14O95416 240 aa7.78□□□□□ -1.16
VAMP3-201ENST00000054666 AGR2O95994 175 aa7.78□□□□□ -1.16
VAMP3-201ENST00000054666 GABRG2P18507 467 aa7.78□□□□□ -1.16
VAMP3-201ENST00000054666 CNR2P34972 360 aa7.78□□□□□ -1.16
VAMP3-201ENST00000054666 CLK1P49759 484 aaKnown RBP7.78□□□□□ -1.16
VAMP3-201ENST00000054666 XKP51811 444 aa7.78□□□□□ -1.16
VAMP3-201ENST00000054666 LSM3P62310 102 aaKnown RBP7.78□□□□□ -1.16
VAMP3-201ENST00000054666 FUT5Q11128 374 aa7.78□□□□□ -1.16
VAMP3-201ENST00000054666 TARDBPQ13148 414 aaKnown RBP eCLIP7.78□□□□□ -1.16
VAMP3-201ENST00000054666 TMED1Q13445 227 aa7.78□□□□□ -1.16
VAMP3-201ENST00000054666 GPR18Q14330 331 aa7.78□□□□□ -1.16
VAMP3-201ENST00000054666 TIGD6Q17RP2 521 aa7.78□□□□□ -1.16
VAMP3-201ENST00000054666 FIGLAQ6QHK4 219 aa7.78□□□□□ -1.16
VAMP3-201ENST00000054666 SLCO6A1Q86UG4 719 aa7.78□□□□□ -1.16
VAMP3-201ENST00000054666 RBM45Q8IUH3 476 aaKnown RBP7.78□□□□□ -1.16
VAMP3-201ENST00000054666 ADAMTS15Q8TE58 950 aa7.78□□□□□ -1.16
VAMP3-201ENST00000054666 ZFPM2Q8WW38 1151 aa7.78□□□□□ -1.16
VAMP3-201ENST00000054666 GGHQ92820 318 aa7.78□□□□□ -1.16
VAMP3-201ENST00000054666 SLC38A4Q969I6 547 aa7.78□□□□□ -1.16
VAMP3-201ENST00000054666 ELP4Q96EB1 424 aa7.78□□□□□ -1.16
VAMP3-201ENST00000054666 MSANTD3Q96H12 275 aa7.78□□□□□ -1.16
VAMP3-201ENST00000054666 Q96MT0 163 aa7.78□□□□□ -1.16
VAMP3-201ENST00000054666 OR2A14Q96R47 310 aa7.78□□□□□ -1.16
VAMP3-201ENST00000054666 ZFYVE21Q9BQ24 234 aa7.78□□□□□ -1.16
VAMP3-201ENST00000054666 ACTRT3Q9BYD9 372 aa7.78□□□□□ -1.16
VAMP3-201ENST00000054666 POLR2J3Q9H1A7 115 aaKnown RBP7.78□□□□□ -1.16
VAMP3-201ENST00000054666 POLMQ9NP87 494 aaPredicted RBP7.78□□□□□ -1.16
VAMP3-201ENST00000054666 FKBP14Q9NWM8 211 aa7.78□□□□□ -1.16
VAMP3-201ENST00000054666 MS4A12Q9NXJ0 267 aa7.78□□□□□ -1.16
VAMP3-201ENST00000054666 KLHL28Q9NXS3 571 aa7.78□□□□□ -1.16
VAMP3-201ENST00000054666 GPR83Q9NYM4 423 aa7.78□□□□□ -1.16
VAMP3-201ENST00000054666 CNOT2Q9NZN8 540 aaKnown RBP7.78□□□□□ -1.16
VAMP3-201ENST00000054666 A4GNTQ9UNA3 340 aa7.78□□□□□ -1.16
VAMP3-201ENST00000054666 ENTPD2Q9Y5L3 495 aa7.78□□□□□ -1.16
VAMP3-201ENST00000054666 FANCMQ8IYD8 2048 aa7.78□□□□□ -1.16
VAMP3-201ENST00000054666 DSPPQ9NZW4 1301 aa7.77□□□□□ -1.16
VAMP3-201ENST00000054666 SH3PXD2BA1X283 911 aa7.77□□□□□ -1.17
VAMP3-201ENST00000054666 OR5K4A6NMS3 321 aa7.77□□□□□ -1.17
VAMP3-201ENST00000054666 C2CD4DB7Z1M9 353 aa7.77□□□□□ -1.17
VAMP3-201ENST00000054666 M0R129 80 aa7.77□□□□□ -1.17
VAMP3-201ENST00000054666 SYT5O00445 386 aa7.77□□□□□ -1.17
VAMP3-201ENST00000054666 LGI1O95970 557 aa7.77□□□□□ -1.17
VAMP3-201ENST00000054666 ADORA3P0DMS8 318 aa7.77□□□□□ -1.17
VAMP3-201ENST00000054666 GABRB1P18505 474 aa7.77□□□□□ -1.17
VAMP3-201ENST00000054666 ALDH4A1P30038 563 aa7.77□□□□□ -1.17
VAMP3-201ENST00000054666 C21orf33P30042 268 aaPredicted RBP7.77□□□□□ -1.17
VAMP3-201ENST00000054666 LTBRP36941 435 aa7.77□□□□□ -1.17
VAMP3-201ENST00000054666 TAS2R41P59536 307 aa7.77□□□□□ -1.17
VAMP3-201ENST00000054666 VBP1P61758 197 aa7.77□□□□□ -1.17
VAMP3-201ENST00000054666 DUSP2Q05923 314 aa7.77□□□□□ -1.17
VAMP3-201ENST00000054666 ILKQ13418 452 aa7.77□□□□□ -1.17
VAMP3-201ENST00000054666 PIN1Q13526 163 aaPredicted RBP7.77□□□□□ -1.17
VAMP3-201ENST00000054666 SEC23BQ15437 767 aa7.77□□□□□ -1.17
VAMP3-201ENST00000054666 DEFB134Q4QY38 66 aa7.77□□□□□ -1.17
VAMP3-201ENST00000054666 ZNF311Q5JNZ3 666 aa7.77□□□□□ -1.17
VAMP3-201ENST00000054666 TMEM236Q5W0B7 351 aa7.77□□□□□ -1.17
VAMP3-201ENST00000054666 PGBD2Q6P3X8 592 aa7.77□□□□□ -1.17
VAMP3-201ENST00000054666 OOSP2Q86WS3 158 aa7.77□□□□□ -1.17
VAMP3-201ENST00000054666 LACC1Q8IV20 430 aa7.77□□□□□ -1.17
VAMP3-201ENST00000054666 OR13H1Q8NG92 308 aa7.77□□□□□ -1.17
VAMP3-201ENST00000054666 OR4K14Q8NGD5 310 aa7.77□□□□□ -1.17
VAMP3-201ENST00000054666 OR4D11Q8NGI4 311 aa7.77□□□□□ -1.17
VAMP3-201ENST00000054666 FNDC8Q8TC99 324 aa7.77□□□□□ -1.17
VAMP3-201ENST00000054666 SLC7A13Q8TCU3 470 aa7.77□□□□□ -1.17
VAMP3-201ENST00000054666 ZNF675Q8TD23 568 aa7.77□□□□□ -1.17
VAMP3-201ENST00000054666 FAM3CQ92520 227 aa7.77□□□□□ -1.17
VAMP3-201ENST00000054666 TANKQ92844 425 aa7.77□□□□□ -1.17
VAMP3-201ENST00000054666 COL26A1Q96A83 441 aa7.77□□□□□ -1.17
VAMP3-201ENST00000054666 CRELD1Q96HD1 420 aa7.77□□□□□ -1.17
VAMP3-201ENST00000054666 ZNF681Q96N22 645 aa7.77□□□□□ -1.17
VAMP3-201ENST00000054666 TRNT1Q96Q11 434 aaKnown RBP7.77□□□□□ -1.17
VAMP3-201ENST00000054666 GDF15Q99988 308 aa7.77□□□□□ -1.17
VAMP3-201ENST00000054666 WDR12Q9GZL7 423 aaKnown RBP7.77□□□□□ -1.17
VAMP3-201ENST00000054666 SYNPO2LQ9H987 977 aa7.77□□□□□ -1.17
VAMP3-201ENST00000054666 HMG20AQ9NP66 347 aa7.77□□□□□ -1.17
VAMP3-201ENST00000054666 PRDM9Q9NQV7 894 aa7.77□□□□□ -1.17
VAMP3-201ENST00000054666 DNAAF2Q9NVR5 837 aaKnown RBP7.77□□□□□ -1.17
VAMP3-201ENST00000054666 SELENONQ9NZV5 590 aa7.77□□□□□ -1.17
VAMP3-201ENST00000054666 CPNE7Q9UBL6 633 aa7.77□□□□□ -1.17
VAMP3-201ENST00000054666 KIR2DS5A0A0G2JLQ3 304 aa7.76□□□□□ -1.17
VAMP3-201ENST00000054666 A0A0G2JNG1 304 aa7.76□□□□□ -1.17
VAMP3-201ENST00000054666 EFCAB9A8MZ26 197 aa7.76□□□□□ -1.17
VAMP3-201ENST00000054666 KIR2DS3K7RE56 304 aa7.76□□□□□ -1.17
VAMP3-201ENST00000054666 ZSCAN9O15535 394 aaPredicted RBP7.76□□□□□ -1.17
VAMP3-201ENST00000054666 TNFSF14O43557 240 aa7.76□□□□□ -1.17
VAMP3-201ENST00000054666 SLITRK5O94991 958 aa7.76□□□□□ -1.17
VAMP3-201ENST00000054666 STSP08842 583 aa7.76□□□□□ -1.17
VAMP3-201ENST00000054666 GLULP15104 373 aa7.76□□□□□ -1.17
VAMP3-201ENST00000054666 ACVR2AP27037 513 aa7.76□□□□□ -1.17
VAMP3-201ENST00000054666 IFNGR2P38484 337 aa7.76□□□□□ -1.17
VAMP3-201ENST00000054666 ST3GAL4Q11206 333 aa7.76□□□□□ -1.17
VAMP3-201ENST00000054666 COX10Q12887 443 aa7.76□□□□□ -1.17
VAMP3-201ENST00000054666 KIR2DS5Q14953 304 aa7.76□□□□□ -1.17
VAMP3-201ENST00000054666 LTB4RQ15722 352 aa7.76□□□□□ -1.17
VAMP3-201ENST00000054666 SYT16Q17RD7 645 aa7.76□□□□□ -1.17
VAMP3-201ENST00000054666 FAM214AQ32MH5 1076 aa7.76□□□□□ -1.17
VAMP3-201ENST00000054666 LEXMQ3ZCV2 418 aa7.76□□□□□ -1.17
VAMP3-201ENST00000054666 SLX4IPQ5VYV7 408 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms