RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 MMGT1Q8N4V1 131 aa14.53□□□□□ -0.08
ERCC1-201ENST00000013807 OR4F6Q8NGB9 312 aa14.53□□□□□ -0.08
ERCC1-201ENST00000013807 ZNF483Q8TF39 744 aaPredicted RBP14.53□□□□□ -0.08
ERCC1-201ENST00000013807 NINJ1Q92982 152 aa14.53□□□□□ -0.08
ERCC1-201ENST00000013807 NSUN5Q96P11 429 aaKnown RBP14.53□□□□□ -0.08
ERCC1-201ENST00000013807 PAFAH2Q99487 392 aa14.53□□□□□ -0.08
ERCC1-201ENST00000013807 SH3GL2Q99962 352 aa14.53□□□□□ -0.08
ERCC1-201ENST00000013807 MRPL46Q9H2W6 279 aaKnown RBP14.53□□□□□ -0.08
ERCC1-201ENST00000013807 ALKBH4Q9NXW9 302 aa14.53□□□□□ -0.08
ERCC1-201ENST00000013807 XPR1Q9UBH6 696 aa14.53□□□□□ -0.08
ERCC1-201ENST00000013807 FOXD3Q9UJU5 478 aaPredicted RBP14.53□□□□□ -0.08
ERCC1-201ENST00000013807 ZNF225Q9UK10 706 aa14.53□□□□□ -0.08
ERCC1-201ENST00000013807 CFL2Q9Y281 166 aa14.53□□□□□ -0.08
ERCC1-201ENST00000013807 C15orf41Q9Y2V0 281 aa14.53□□□□□ -0.08
ERCC1-201ENST00000013807 PCNX3Q9H6A9 2034 aa14.53□□□□□ -0.08
ERCC1-201ENST00000013807 A0A1B0GTL3 188 aa14.52□□□□□ -0.09
ERCC1-201ENST00000013807 SMIM24O75264 130 aa14.52□□□□□ -0.09
ERCC1-201ENST00000013807 PPM1BO75688 479 aa14.52□□□□□ -0.09
ERCC1-201ENST00000013807 KRT38O76015 456 aa14.52□□□□□ -0.09
ERCC1-201ENST00000013807 OTCP00480 354 aa14.52□□□□□ -0.09
ERCC1-201ENST00000013807 CSNK2A2P19784 350 aaPredicted RBP14.52□□□□□ -0.09
ERCC1-201ENST00000013807 GDF1P27539 372 aa14.52□□□□□ -0.09
ERCC1-201ENST00000013807 MAPK12P53778 367 aa14.52□□□□□ -0.09
ERCC1-201ENST00000013807 MYBPHQ13203 477 aa14.52□□□□□ -0.09
ERCC1-201ENST00000013807 NSUN5P2Q63ZY6 315 aa14.52□□□□□ -0.09
ERCC1-201ENST00000013807 TIGD3Q6B0B8 471 aa14.52□□□□□ -0.09
ERCC1-201ENST00000013807 TMEM64Q6YI46 380 aa14.52□□□□□ -0.09
ERCC1-201ENST00000013807 NUP54Q7Z3B4 507 aa14.52□□□□□ -0.09
ERCC1-201ENST00000013807 COMMD6Q7Z4G1 85 aa14.52□□□□□ -0.09
ERCC1-201ENST00000013807 VWA5B2Q8N398 1253 aa14.52□□□□□ -0.09
ERCC1-201ENST00000013807 RELL2Q8NC24 303 aaPredicted RBP14.52□□□□□ -0.09
ERCC1-201ENST00000013807 DCAKDQ8WVC6 231 aa14.52□□□□□ -0.09
ERCC1-201ENST00000013807 TM4SF18Q96CE8 201 aa14.52□□□□□ -0.09
ERCC1-201ENST00000013807 HSPBAP1Q96EW2 488 aa14.52□□□□□ -0.09
ERCC1-201ENST00000013807 JSRP1Q96MG2 331 aaPredicted RBP14.52□□□□□ -0.09
ERCC1-201ENST00000013807 ZNF681Q96N22 645 aa14.52□□□□□ -0.09
ERCC1-201ENST00000013807 GNRHR2Q96P88 292 aa14.52□□□□□ -0.09
ERCC1-201ENST00000013807 NXF5Q9H1B4 397 aaKnown RBP14.52□□□□□ -0.09
ERCC1-201ENST00000013807 CXXC4Q9H2H0 198 aa14.52□□□□□ -0.09
ERCC1-201ENST00000013807 ELOVL6Q9H5J4 265 aa14.52□□□□□ -0.09
ERCC1-201ENST00000013807 MAT2BQ9NZL9 334 aa14.52□□□□□ -0.09
ERCC1-201ENST00000013807 DMGDHQ9UI17 866 aaKnown RBP14.52□□□□□ -0.09
ERCC1-201ENST00000013807 GOLGA6L10A6NI86 522 aa14.51□□□□□ -0.09
ERCC1-201ENST00000013807 CD8B2A6NJW9 211 aa14.51□□□□□ -0.09
ERCC1-201ENST00000013807 PPP6CO00743 305 aa14.51□□□□□ -0.09
ERCC1-201ENST00000013807 DVL2O14641 736 aa14.51□□□□□ -0.09
ERCC1-201ENST00000013807 TO15178 435 aa14.51□□□□□ -0.09
ERCC1-201ENST00000013807 ACOX3O15254 700 aa14.51□□□□□ -0.09
ERCC1-201ENST00000013807 ZWINTO95229 277 aa14.51□□□□□ -0.09
ERCC1-201ENST00000013807 RHOXF2BP0C7M4 288 aa14.51□□□□□ -0.09
ERCC1-201ENST00000013807 PTPN6P29350 595 aa14.51□□□□□ -0.09
ERCC1-201ENST00000013807 ECHS1P30084 290 aa14.51□□□□□ -0.09
ERCC1-201ENST00000013807 TRPC1P48995 793 aa14.51□□□□□ -0.09
ERCC1-201ENST00000013807 DCAF7P61962 342 aa14.51□□□□□ -0.09
ERCC1-201ENST00000013807 WHAMMP3Q1A5X7 153 aa14.51□□□□□ -0.09
ERCC1-201ENST00000013807 BICRALQ6AI39 1079 aa14.51□□□□□ -0.09
ERCC1-201ENST00000013807 TTC19Q6DKK2 380 aaPredicted RBP14.51□□□□□ -0.09
ERCC1-201ENST00000013807 SLC30A6Q6NXT4 461 aa14.51□□□□□ -0.09
ERCC1-201ENST00000013807 LETMD1Q6P1Q0 360 aa14.51□□□□□ -0.09
ERCC1-201ENST00000013807 TAOK1Q7L7X3 1001 aa14.51□□□□□ -0.09
ERCC1-201ENST00000013807 TMEM200AQ86VY9 491 aa14.51□□□□□ -0.09
ERCC1-201ENST00000013807 NAXEQ8NCW5 288 aa14.51□□□□□ -0.09
ERCC1-201ENST00000013807 HGDQ93099 445 aa14.51□□□□□ -0.09
ERCC1-201ENST00000013807 CALHM2Q9HA72 323 aa14.51□□□□□ -0.09
ERCC1-201ENST00000013807 FARSBQ9NSD9 589 aaKnown RBP14.51□□□□□ -0.09
ERCC1-201ENST00000013807 NMRK1Q9NWW6 199 aa14.51□□□□□ -0.09
ERCC1-201ENST00000013807 TRPS1Q9UHF7 1281 aa14.51□□□□□ -0.09
ERCC1-201ENST00000013807 PSME2Q9UL46 239 aa14.51□□□□□ -0.09
ERCC1-201ENST00000013807 SNX6Q9UNH7 406 aa14.51□□□□□ -0.09
ERCC1-201ENST00000013807 DTX4Q9Y2E6 619 aa14.51□□□□□ -0.09
ERCC1-201ENST00000013807 ZNF469Q96JG9 3925 aaPredicted RBP14.51□□□□□ -0.09
ERCC1-201ENST00000013807 C15orf38-AP3S2A0A0A6YYH1 394 aa14.5□□□□□ -0.09
ERCC1-201ENST00000013807 MBD3L4A6NDZ8 208 aaPredicted RBP14.5□□□□□ -0.09
ERCC1-201ENST00000013807 MBD3L3A6NE82 208 aaPredicted RBP14.5□□□□□ -0.09
ERCC1-201ENST00000013807 MBD3L5A6NJ08 208 aaPredicted RBP14.5□□□□□ -0.09
ERCC1-201ENST00000013807 LRATO95237 230 aa14.5□□□□□ -0.09
ERCC1-201ENST00000013807 ACSL3O95573 720 aa14.5□□□□□ -0.09
ERCC1-201ENST00000013807 PDYNP01213 254 aa14.5□□□□□ -0.09
ERCC1-201ENST00000013807 HSD3B1P14060 373 aa14.5□□□□□ -0.09
ERCC1-201ENST00000013807 BMP7P18075 431 aa14.5□□□□□ -0.09
ERCC1-201ENST00000013807 NT5EP21589 574 aa14.5□□□□□ -0.09
ERCC1-201ENST00000013807 DRD5P21918 477 aa14.5□□□□□ -0.09
ERCC1-201ENST00000013807 HSD3B2P26439 372 aa14.5□□□□□ -0.09
ERCC1-201ENST00000013807 HSD17B3P37058 310 aa14.5□□□□□ -0.09
ERCC1-201ENST00000013807 PTGDSP41222 190 aa14.5□□□□□ -0.09
ERCC1-201ENST00000013807 KIR2DL3P43628 341 aa14.5□□□□□ -0.09
ERCC1-201ENST00000013807 PPICP45877 212 aa14.5□□□□□ -0.09
ERCC1-201ENST00000013807 ASCL1P50553 236 aa14.5□□□□□ -0.09
ERCC1-201ENST00000013807 DAZAP2Q15038 168 aaPredicted RBP14.5□□□□□ -0.09
ERCC1-201ENST00000013807 GLE1Q53GS7 698 aaKnown RBP14.5□□□□□ -0.09
ERCC1-201ENST00000013807 TIFABQ6ZNK6 161 aa14.5□□□□□ -0.09
ERCC1-201ENST00000013807 WDR53Q7Z5U6 358 aaPredicted RBP14.5□□□□□ -0.09
ERCC1-201ENST00000013807 LCA5Q86VQ0 697 aa14.5□□□□□ -0.09
ERCC1-201ENST00000013807 TNIP2Q8NFZ5 429 aa14.5□□□□□ -0.09
ERCC1-201ENST00000013807 MBD3L2Q8NHZ7 208 aaPredicted RBP14.5□□□□□ -0.09
ERCC1-201ENST00000013807 ZPLD1Q8TCW7 415 aa14.5□□□□□ -0.09
ERCC1-201ENST00000013807 RNASE6Q93091 150 aaKnown RBP14.5□□□□□ -0.09
ERCC1-201ENST00000013807 ERP27Q96DN0 273 aa14.5□□□□□ -0.09
ERCC1-201ENST00000013807 CNRIP1Q96F85 164 aaPredicted RBP14.5□□□□□ -0.09
ERCC1-201ENST00000013807 LRRC46Q96FV0 321 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms