RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Uckl1Q91YL3 548 aa9.26□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Med27Q9DB40 311 aa9.26□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Coro1bQ9WUM3 484 aaKnown RBP9.26□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Gm14295A2BG91 834 aa9.26□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Vmn2r91E9Q2U5 856 aa9.26□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 ChadlE9Q7T7 748 aa9.26□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Smim18J3QNP2 93 aa9.26□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Gm10338K7N692 204 aa9.26□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Gm17026K7N6Z0 213 aa9.26□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Man2b2O54782 1018 aa9.26□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 P01878 344 aa9.26□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 TtkP35761 856 aa9.26□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Cldn34b4Q3V0X2 211 aa9.26□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Dvl3Q61062 716 aa9.26□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 B4gat1Q8BWP8 415 aa9.26□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Lrrtm3Q8BZ81 582 aa9.26□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Med19Q8C1S0 244 aa9.26□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Rbm34Q8C5L7 375 aaKnown RBP9.26□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Ttc23Q8CHY7 488 aa9.26□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Slc31a1Q8K211 196 aa9.26□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Nmral1Q8K2T1 309 aa9.26□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Clrn1Q8K445 232 aa9.26□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Sirt4Q8R216 333 aa9.26□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Ntmt1Q8R2U4 223 aa9.26□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Olfr1387Q8VFA9 311 aa9.26□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Olfr700Q8VFM5 316 aa9.26□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Pcdhb16Q91Y03 802 aa9.26□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Spred2Q924S7 410 aa9.26□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Fbxl12Q9EPX5 326 aa9.26□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 TescQ9JKL5 214 aa9.26□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Dnaja4Q9JMC3 397 aa9.26□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Rhox2dW4VSN9 191 aa9.26□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Olfr1366A0A1W2P740 328 aa9.25□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Rhox2bA2A447 191 aa9.25□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Rhox2cA2AWL9 191 aa9.25□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Olfr59B1ARL3 323 aa9.25□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Zfp40B1B1D3 796 aa9.25□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Lrrc31F6VYM1 502 aa9.25□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Zfp934K7N6H3 473 aa9.25□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Prl7a1O54830 266 aa9.25□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Lire1P11260 357 aa9.25□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 H2-Q7P14429 334 aa9.25□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 H2-Q9P14431 200 aa9.25□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Stard6P59096 233 aa9.25□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Slc26a10Q5EBI0 492 aa9.25□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Havcr1Q5QNS5 305 aa9.25□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Derl2Q8BNI4 239 aaKnown RBP9.25□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Hcar1Q8C131 343 aa9.25□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Med17Q8VCD5 649 aaKnown RBP9.25□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Olfr447Q8VGP6 310 aa9.25□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Olfr643Q8VGY1 314 aa9.25□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Slc26a5Q99NH7 744 aa9.25□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Phf6Q9D4J7 364 aa9.25□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Tlr4Q9QUK6 835 aa9.25□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Olfr1188A2AV10 312 aa9.25□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Zfp738B8JJX8 793 aa9.25□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Olfr209L7N1X3 305 aa9.25□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Cyr61P18406 379 aa9.25□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Acod1P54987 488 aa9.25□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Ctu2Q3U308 514 aa9.25□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Chsy3Q5DTK1 884 aa9.25□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Prkg2Q61410 762 aa9.25□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Fam189a1Q6A044 515 aa9.25□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Znf513Q6PD29 541 aa9.25□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Olfr765Q7TRI6 309 aa9.25□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Creb5Q8K1L0 357 aa9.25□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Dlgap5Q8K4R9 808 aa9.25□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Ugt2b37Q8VCN3 530 aa9.25□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Pla2g15Q8VEB4 412 aa9.25□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Ccdc71Q8VEG0 433 aa9.25□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Olfr767Q8VG33 309 aa9.25□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Abcg4Q91WA9 646 aa9.25□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 4931417E11RikQ9CR05 305 aa9.25□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Ap3s1Q9DCR2 193 aa9.25□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Inpp5eQ9JII1 647 aa9.25□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Plag1Q9QYE0 499 aa9.25□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 SrrQ9QZX7 339 aa9.25□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Myo16Q5DU14 1919 aa9.25□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 1700028J19RikA0A0U1RP08 172 aa9.25□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 CerklA2AQH1 525 aa9.25□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Tmem215A7E1Z1 235 aa9.25□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Tex28B1AYN9 409 aa9.25□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Vmn2r52L7N2B2 852 aa9.25□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 NlkO54949 527 aa9.25□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 OsmrO70458 971 aa9.25□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Trappc13Q3TIR1 417 aa9.25□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Secisbp2Q3U1C4 858 aaKnown RBP9.25□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Wdr75Q3U821 830 aaKnown RBP9.25□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Ugt2b36Q3UEP4 530 aa9.25□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Nr0b1Q61066 472 aa9.25□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Tas2r110Q7M712 333 aa9.25□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Lamp3Q7TST5 411 aa9.25□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Slitrk2Q810C0 846 aa9.25□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Gen1Q8BMI4 908 aa9.25□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Neu4Q8BZL1 478 aa9.25□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Bpifb2Q8C1E1 462 aa9.25□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Trmt10aQ8C1Z8 328 aaKnown RBP9.25□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Dcaf12l1Q8CBW4 501 aa9.25□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Fbxl8Q8CIG9 374 aa9.25□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Crlf2Q8CII9 359 aa9.25□□□□□ -0.93
Retrieved 100 of 22,080 RNA–protein pairs in 37.2 ms