RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Sox4Q06831 440 aa12.76□□□□□ -0.37
Nup88-201ENSMUST00000035283 Gpr165Q3V3A3 455 aa12.76□□□□□ -0.37
Nup88-201ENSMUST00000035283 Gm11992Q5SS90 291 aa12.76□□□□□ -0.37
Nup88-201ENSMUST00000035283 Cdkn2dQ60773 166 aa12.76□□□□□ -0.37
Nup88-201ENSMUST00000035283 Ostf1Q62422 215 aa12.76□□□□□ -0.37
Nup88-201ENSMUST00000035283 Ffar1Q76JU9 300 aa12.76□□□□□ -0.37
Nup88-201ENSMUST00000035283 Rims3Q80U57 307 aa12.76□□□□□ -0.37
Nup88-201ENSMUST00000035283 Trmt61aQ80XC2 290 aa12.76□□□□□ -0.37
Nup88-201ENSMUST00000035283 Supv3l1Q80YD1 779 aaKnown RBP12.76□□□□□ -0.37
Nup88-201ENSMUST00000035283 Cst13Q80ZN5 141 aa12.76□□□□□ -0.37
Nup88-201ENSMUST00000035283 Slc39a9Q8BFU1 308 aa12.76□□□□□ -0.37
Nup88-201ENSMUST00000035283 Glis1Q8K1M4 789 aa12.76□□□□□ -0.37
Nup88-201ENSMUST00000035283 Cops8Q8VBV7 209 aa12.76□□□□□ -0.37
Nup88-201ENSMUST00000035283 Paip1Q8VE62 400 aa12.76□□□□□ -0.37
Nup88-201ENSMUST00000035283 Olfr1278Q8VF39 313 aa12.76□□□□□ -0.37
Nup88-201ENSMUST00000035283 Olfr315Q8VFG7 309 aa12.76□□□□□ -0.37
Nup88-201ENSMUST00000035283 Olfr815Q8VFU0 316 aa12.76□□□□□ -0.37
Nup88-201ENSMUST00000035283 Ash2lQ91X20 623 aa12.76□□□□□ -0.37
Nup88-201ENSMUST00000035283 Lgals2Q9CQW5 130 aa12.76□□□□□ -0.37
Nup88-201ENSMUST00000035283 Gm26657Q9CVR1 127 aa12.76□□□□□ -0.37
Nup88-201ENSMUST00000035283 Pla2g12aQ9EPR2 192 aa12.76□□□□□ -0.37
Nup88-201ENSMUST00000035283 Nusap1Q9ERH4 427 aaKnown RBP12.76□□□□□ -0.37
Nup88-201ENSMUST00000035283 Obsl1D3YYU8 1804 aaKnown RBP12.75□□□□□ -0.37
Nup88-201ENSMUST00000035283 Ankrd12G5E893 2041 aa12.75□□□□□ -0.37
Nup88-201ENSMUST00000035283 Adamts9E9PUN6 1931 aa12.75□□□□□ -0.37
Nup88-201ENSMUST00000035283 Igkv17-121A0A0G2JFA8 117 aa12.75□□□□□ -0.37
Nup88-201ENSMUST00000035283 Gm5141A0A0J9YUW3 581 aa12.75□□□□□ -0.37
Nup88-201ENSMUST00000035283 Cd163l1A0A1B0GSB0 991 aa12.75□□□□□ -0.37
Nup88-201ENSMUST00000035283 Ddi2A2ADY9 399 aa12.75□□□□□ -0.37
Nup88-201ENSMUST00000035283 Gm5938A2AEN9 163 aa12.75□□□□□ -0.37
Nup88-201ENSMUST00000035283 Gm14295A2BG91 834 aa12.75□□□□□ -0.37
Nup88-201ENSMUST00000035283 Olfr1249L7MU51 318 aa12.75□□□□□ -0.37
Nup88-201ENSMUST00000035283 CyctP00015 105 aa12.75□□□□□ -0.37
Nup88-201ENSMUST00000035283 Slc6a12P31651 614 aa12.75□□□□□ -0.37
Nup88-201ENSMUST00000035283 Serpind1P49182 478 aa12.75□□□□□ -0.37
Nup88-201ENSMUST00000035283 PtnP63089 168 aa12.75□□□□□ -0.37
Nup88-201ENSMUST00000035283 JupQ02257 745 aaKnown RBP12.75□□□□□ -0.37
Nup88-201ENSMUST00000035283 Mfsd2bQ3T9M1 494 aa12.75□□□□□ -0.37
Nup88-201ENSMUST00000035283 Ube2fbQ3UWQ3 185 aa12.75□□□□□ -0.37
Nup88-201ENSMUST00000035283 H2-Q2Q4KN81 360 aa12.75□□□□□ -0.37
Nup88-201ENSMUST00000035283 Orm1Q60590 207 aa12.75□□□□□ -0.37
Nup88-201ENSMUST00000035283 Cd6Q61003 665 aa12.75□□□□□ -0.37
Nup88-201ENSMUST00000035283 Meig1Q61845 88 aa12.75□□□□□ -0.37
Nup88-201ENSMUST00000035283 Tas2r3Q7TQA7 316 aa12.75□□□□□ -0.37
Nup88-201ENSMUST00000035283 Otub1Q7TQI3 271 aa12.75□□□□□ -0.37
Nup88-201ENSMUST00000035283 Npas4Q8BGD7 802 aa12.75□□□□□ -0.37
Nup88-201ENSMUST00000035283 Slc25a24Q8BMD8 475 aa12.75□□□□□ -0.37
Nup88-201ENSMUST00000035283 Cox10Q8CFY5 443 aa12.75□□□□□ -0.37
Nup88-201ENSMUST00000035283 Piwil4Q8CGT6 848 aa12.75□□□□□ -0.37
Nup88-201ENSMUST00000035283 Olfr586Q8VH13 317 aa12.75□□□□□ -0.37
Nup88-201ENSMUST00000035283 Slco2a1Q9EPT5 643 aa12.75□□□□□ -0.37
Nup88-201ENSMUST00000035283 Pard6gQ9JK84 382 aa12.75□□□□□ -0.37
Nup88-201ENSMUST00000035283 Maged1Q9QYH6 775 aaKnown RBP12.75□□□□□ -0.37
Nup88-201ENSMUST00000035283 Adam26aQ9R158 697 aa12.75□□□□□ -0.37
Nup88-201ENSMUST00000035283 AgtrapQ9WVK0 161 aa12.75□□□□□ -0.37
Nup88-201ENSMUST00000035283 Znf318Q99PP2 2237 aa12.75□□□□□ -0.37
Nup88-201ENSMUST00000035283 Gm21319F6YNI8 144 aa12.74□□□□□ -0.37
Nup88-201ENSMUST00000035283 Rnpepl1G5E872 720 aa12.74□□□□□ -0.37
Nup88-201ENSMUST00000035283 NlkO54949 527 aa12.74□□□□□ -0.37
Nup88-201ENSMUST00000035283 P01631 113 aa12.74□□□□□ -0.37
Nup88-201ENSMUST00000035283 Gja1P23242 382 aa12.74□□□□□ -0.37
Nup88-201ENSMUST00000035283 Wdr5P61965 334 aa12.74□□□□□ -0.37
Nup88-201ENSMUST00000035283 VegfcP97953 415 aa12.74□□□□□ -0.37
Nup88-201ENSMUST00000035283 Hif3aQ0VBL6 662 aa12.74□□□□□ -0.37
Nup88-201ENSMUST00000035283 Dcp1bQ3U564 578 aa12.74□□□□□ -0.37
Nup88-201ENSMUST00000035283 Coq8aQ60936 645 aa12.74□□□□□ -0.37
Nup88-201ENSMUST00000035283 Rbm38Q62176 237 aaKnown RBP12.74□□□□□ -0.37
Nup88-201ENSMUST00000035283 VclQ64727 1066 aaKnown RBP12.74□□□□□ -0.37
Nup88-201ENSMUST00000035283 Olfr1101Q7TR59 310 aa12.74□□□□□ -0.37
Nup88-201ENSMUST00000035283 Mief1Q8BGV8 463 aa12.74□□□□□ -0.37
Nup88-201ENSMUST00000035283 Trim23Q8BGX0 574 aa12.74□□□□□ -0.37
Nup88-201ENSMUST00000035283 Slc25a12Q8BH59 677 aa12.74□□□□□ -0.37
Nup88-201ENSMUST00000035283 Gjc2Q8BQU6 440 aa12.74□□□□□ -0.37
Nup88-201ENSMUST00000035283 Polr1eQ8K202 482 aaKnown RBP12.74□□□□□ -0.37
Nup88-201ENSMUST00000035283 Hus1bQ8K572 276 aa12.74□□□□□ -0.37
Nup88-201ENSMUST00000035283 Q8R3C1 574 aa12.74□□□□□ -0.37
Nup88-201ENSMUST00000035283 Olfr693Q8VF89 316 aa12.74□□□□□ -0.37
Nup88-201ENSMUST00000035283 Spz1Q99MY0 378 aa12.74□□□□□ -0.37
Nup88-201ENSMUST00000035283 Trmt5Q9D0C4 501 aa12.74□□□□□ -0.37
Nup88-201ENSMUST00000035283 Phf6Q9D4J7 364 aa12.74□□□□□ -0.37
Nup88-201ENSMUST00000035283 ItpaQ9D892 198 aa12.74□□□□□ -0.37
Nup88-201ENSMUST00000035283 Fam45aQ9D8N2 357 aa12.74□□□□□ -0.37
Nup88-201ENSMUST00000035283 Zswim2Q9D9X6 631 aa12.74□□□□□ -0.37
Nup88-201ENSMUST00000035283 Glipr1l1Q9DAG6 236 aa12.74□□□□□ -0.37
Nup88-201ENSMUST00000035283 Pbld1Q9DCG6 288 aa12.74□□□□□ -0.37
Nup88-201ENSMUST00000035283 Slc38a3Q9DCP2 505 aa12.74□□□□□ -0.37
Nup88-201ENSMUST00000035283 Praf2Q9JIG8 178 aa12.74□□□□□ -0.37
Nup88-201ENSMUST00000035283 PcntP48725 2898 aa12.74□□□□□ -0.37
Nup88-201ENSMUST00000035283 Tcte1A6H639 498 aa12.74□□□□□ -0.37
Nup88-201ENSMUST00000035283 Gm14139F6ZS36 494 aa12.74□□□□□ -0.37
Nup88-201ENSMUST00000035283 Gm8229K7N749 213 aa12.74□□□□□ -0.37
Nup88-201ENSMUST00000035283 Cyp17a1P27786 507 aa12.74□□□□□ -0.37
Nup88-201ENSMUST00000035283 Ppm1bP36993 390 aa12.74□□□□□ -0.37
Nup88-201ENSMUST00000035283 Adamts19P59509 1210 aa12.74□□□□□ -0.37
Nup88-201ENSMUST00000035283 Usp30Q3UN04 517 aa12.74□□□□□ -0.37
Nup88-201ENSMUST00000035283 Spag8Q3V0Q6 470 aa12.74□□□□□ -0.37
Nup88-201ENSMUST00000035283 Olfr598Q7TRR2 319 aa12.74□□□□□ -0.37
Nup88-201ENSMUST00000035283 Zc3hc1Q80YV2 501 aa12.74□□□□□ -0.37
Nup88-201ENSMUST00000035283 BspryQ80YW5 473 aa12.74□□□□□ -0.37
Nup88-201ENSMUST00000035283 Sumf2Q8BPG6 308 aa12.74□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 43.3 ms