RNA–Protein interactions for RNA: ENST00000641115.1

PHGDH-210, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,638 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-210ENST00000641115 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.55■□□□□ 0.56
PHGDH-210ENST00000641115 FAM199XQ6PEV8 388 aaPredicted RBP18.55■□□□□ 0.56
PHGDH-210ENST00000641115 FAM198BQ6UWH4 519 aa18.55■□□□□ 0.56
PHGDH-210ENST00000641115 TMPRSS7Q7RTY8 843 aa18.55■□□□□ 0.56
PHGDH-210ENST00000641115 SERPINA11Q86U17 422 aa18.55■□□□□ 0.56
PHGDH-210ENST00000641115 RNF130Q86XS8 419 aa18.55■□□□□ 0.56
PHGDH-210ENST00000641115 OR2L13Q8N349 312 aa18.55■□□□□ 0.56
PHGDH-210ENST00000641115 VWA5B2Q8N398 1253 aa18.55■□□□□ 0.56
PHGDH-210ENST00000641115 PLPP5Q8NEB5 264 aa18.55■□□□□ 0.56
PHGDH-210ENST00000641115 NUP43Q8NFH3 380 aa18.55■□□□□ 0.56
PHGDH-210ENST00000641115 OR2T12Q8NG77 320 aa18.55■□□□□ 0.56
PHGDH-210ENST00000641115 SLC35G5Q96KT7 338 aa18.55■□□□□ 0.56
PHGDH-210ENST00000641115 SPSB2Q99619 263 aa18.55■□□□□ 0.56
PHGDH-210ENST00000641115 PIF1Q9H611 641 aa18.55■□□□□ 0.56
PHGDH-210ENST00000641115 EPS8L2Q9H6S3 715 aa18.55■□□□□ 0.56
PHGDH-210ENST00000641115 CXorf21Q9HAI6 301 aa18.55■□□□□ 0.56
PHGDH-210ENST00000641115 DLL3Q9NYJ7 618 aa18.55■□□□□ 0.56
PHGDH-210ENST00000641115 FOXJ2Q9P0K8 574 aa18.55■□□□□ 0.56
PHGDH-210ENST00000641115 A0A087WV62 115 aa18.54■□□□□ 0.56
PHGDH-210ENST00000641115 TCRBV16S1A1N1A0A5B0 115 aa18.54■□□□□ 0.56
PHGDH-210ENST00000641115 IDSB3KWA1 339 aa18.54■□□□□ 0.56
PHGDH-210ENST00000641115 UPK1AO00322 258 aa18.54■□□□□ 0.56
PHGDH-210ENST00000641115 DYRK3O43781 588 aa18.54■□□□□ 0.56
PHGDH-210ENST00000641115 PLOD3O60568 738 aa18.54■□□□□ 0.56
PHGDH-210ENST00000641115 RECKO95980 971 aa18.54■□□□□ 0.56
PHGDH-210ENST00000641115 CYC1P08574 325 aa18.54■□□□□ 0.56
PHGDH-210ENST00000641115 CD63P08962 238 aa18.54■□□□□ 0.56
PHGDH-210ENST00000641115 TNNI3P19429 210 aa18.54■□□□□ 0.56
PHGDH-210ENST00000641115 BNIP2Q12982 314 aa18.54■□□□□ 0.56
PHGDH-210ENST00000641115 NCF4Q15080 339 aa18.54■□□□□ 0.56
PHGDH-210ENST00000641115 C1orf146Q5VVC0 180 aa18.54■□□□□ 0.56
PHGDH-210ENST00000641115 FAM111BQ6SJ93 734 aa18.54■□□□□ 0.56
PHGDH-210ENST00000641115 FAM13CQ8NE31 585 aa18.54■□□□□ 0.56
PHGDH-210ENST00000641115 TNIP2Q8NFZ5 429 aa18.54■□□□□ 0.56
PHGDH-210ENST00000641115 METTL21AQ8WXB1 218 aa18.54■□□□□ 0.56
PHGDH-210ENST00000641115 ASB9Q96DX5 294 aa18.54■□□□□ 0.56
PHGDH-210ENST00000641115 ZNF578Q96N58 590 aaPredicted RBP18.54■□□□□ 0.56
PHGDH-210ENST00000641115 ZNF583Q96ND8 569 aa18.54■□□□□ 0.56
PHGDH-210ENST00000641115 MS4A4EQ96PG1 132 aa18.54■□□□□ 0.56
PHGDH-210ENST00000641115 SPATA9Q9BWV2 254 aa18.54■□□□□ 0.56
PHGDH-210ENST00000641115 PNO1Q9NRX1 252 aaKnown RBP18.54■□□□□ 0.56
PHGDH-210ENST00000641115 CCDC88CQ9P219 2028 aa18.54■□□□□ 0.56
PHGDH-210ENST00000641115 FAM220BPB1ANY3 271 aa18.53■□□□□ 0.56
PHGDH-210ENST00000641115 STAMBPO95630 424 aa18.53■□□□□ 0.56
PHGDH-210ENST00000641115 SLC5A2P31639 672 aa18.53■□□□□ 0.56
PHGDH-210ENST00000641115 MSX2P35548 267 aaPredicted RBP18.53■□□□□ 0.56
PHGDH-210ENST00000641115 ANXA11P50995 505 aaKnown RBP18.53■□□□□ 0.56
PHGDH-210ENST00000641115 MVDP53602 400 aa18.53■□□□□ 0.56
PHGDH-210ENST00000641115 MAP4K2Q12851 820 aa18.53■□□□□ 0.56
PHGDH-210ENST00000641115 TRIM25Q14258 630 aaKnown RBP18.53■□□□□ 0.56
PHGDH-210ENST00000641115 TRMT12Q53H54 448 aaKnown RBP18.53■□□□□ 0.56
PHGDH-210ENST00000641115 DGAT2L6Q6ZPD8 337 aa18.53■□□□□ 0.56
PHGDH-210ENST00000641115 CTHRC1Q96CG8 243 aa18.53■□□□□ 0.56
PHGDH-210ENST00000641115 REXO5Q96IC2 774 aaKnown RBP18.53■□□□□ 0.56
PHGDH-210ENST00000641115 CRB3Q9BUF7 120 aa18.53■□□□□ 0.56
PHGDH-210ENST00000641115 ANKRA2Q9H9E1 313 aa18.53■□□□□ 0.56
PHGDH-210ENST00000641115 ADAP2Q9NPF8 381 aa18.53■□□□□ 0.56
PHGDH-210ENST00000641115 GPATCH2Q9NW75 528 aa18.53■□□□□ 0.56
PHGDH-210ENST00000641115 NTMQ9P121 344 aa18.53■□□□□ 0.56
PHGDH-210ENST00000641115 C3orf18Q9UK00 162 aa18.53■□□□□ 0.56
PHGDH-210ENST00000641115 POMPQ9Y244 141 aa18.53■□□□□ 0.56
PHGDH-210ENST00000641115 SDK2Q58EX2 2172 aa18.53■□□□□ 0.56
PHGDH-210ENST00000641115 C17orf105B2RV13 164 aa18.52■□□□□ 0.56
PHGDH-210ENST00000641115 CNOT3O75175 753 aaKnown RBP18.52■□□□□ 0.56
PHGDH-210ENST00000641115 CT62P0C5K7 136 aa18.52■□□□□ 0.56
PHGDH-210ENST00000641115 HTR1EP28566 365 aa18.52■□□□□ 0.56
PHGDH-210ENST00000641115 RBMS1P29558 406 aaKnown RBP18.52■□□□□ 0.56
PHGDH-210ENST00000641115 MAGEA8P43361 318 aa18.52■□□□□ 0.56
PHGDH-210ENST00000641115 PGDP52209 483 aa18.52■□□□□ 0.56
PHGDH-210ENST00000641115 EFNA3P52797 238 aa18.52■□□□□ 0.56
PHGDH-210ENST00000641115 EMP2P54851 167 aa18.52■□□□□ 0.56
PHGDH-210ENST00000641115 CASP9P55211 416 aa18.52■□□□□ 0.56
PHGDH-210ENST00000641115 ELAVL1Q15717 326 aaKnown RBP18.52■□□□□ 0.56
PHGDH-210ENST00000641115 COX20Q5RI15 118 aa18.52■□□□□ 0.56
PHGDH-210ENST00000641115 NET1Q7Z628 596 aaPredicted RBP18.52■□□□□ 0.56
PHGDH-210ENST00000641115 CALHM3Q86XJ0 350 aa18.52■□□□□ 0.56
PHGDH-210ENST00000641115 MARCH9Q86YJ5 346 aa18.52■□□□□ 0.56
PHGDH-210ENST00000641115 C10orf111Q8N326 155 aa18.52■□□□□ 0.56
PHGDH-210ENST00000641115 ESX1Q8N693 406 aa18.52■□□□□ 0.56
PHGDH-210ENST00000641115 SPRY4Q9C004 299 aa18.52■□□□□ 0.56
PHGDH-210ENST00000641115 GMPR2Q9P2T1 348 aaKnown RBP18.52■□□□□ 0.56
PHGDH-210ENST00000641115 C19orf53Q9UNZ5 99 aaPredicted RBP18.52■□□□□ 0.56
PHGDH-210ENST00000641115 PADI2Q9Y2J8 665 aa18.52■□□□□ 0.56
PHGDH-210ENST00000641115 CLCA3PQ9Y6N3 262 aa18.52■□□□□ 0.56
PHGDH-210ENST00000641115 DMXL1Q9Y485 3027 aa18.52■□□□□ 0.56
PHGDH-210ENST00000641115 ELOVL7A1L3X0 281 aa18.52■□□□□ 0.55
PHGDH-210ENST00000641115 COQ9O75208 318 aa18.52■□□□□ 0.55
PHGDH-210ENST00000641115 ALOX12BO75342 701 aa18.52■□□□□ 0.55
PHGDH-210ENST00000641115 HMGN2P05204 90 aaKnown RBP18.52■□□□□ 0.55
PHGDH-210ENST00000641115 ETFAP13804 333 aa18.52■□□□□ 0.55
PHGDH-210ENST00000641115 KHKP50053 298 aa18.52■□□□□ 0.55
PHGDH-210ENST00000641115 FOXL2P58012 376 aa18.52■□□□□ 0.55
PHGDH-210ENST00000641115 RPS26P62854 115 aaKnown RBP18.52■□□□□ 0.55
PHGDH-210ENST00000641115 MGAT2Q10469 447 aa18.52■□□□□ 0.55
PHGDH-210ENST00000641115 MAP7Q14244 749 aa18.52■□□□□ 0.55
PHGDH-210ENST00000641115 LASP1Q14847 261 aaKnown RBP18.52■□□□□ 0.55
PHGDH-210ENST00000641115 FHL5Q5TD97 284 aa18.52■□□□□ 0.55
PHGDH-210ENST00000641115 FAAH2Q6GMR7 532 aa18.52■□□□□ 0.55
PHGDH-210ENST00000641115 ERICH5Q6P6B1 374 aa18.52■□□□□ 0.55
PHGDH-210ENST00000641115 TIPARPQ7Z3E1 657 aaKnown RBP18.52■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms