RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 OR2T11Q8NH01 316 aa16.7■□□□□ 0.26
SCARB2-223ENST00000640640 DMRTB1Q96MA1 342 aa16.7■□□□□ 0.26
SCARB2-223ENST00000640640 GTPBP2Q9BX10 602 aaKnown RBP16.7■□□□□ 0.26
SCARB2-223ENST00000640640 SAGE1Q9NXZ1 904 aa16.7■□□□□ 0.26
SCARB2-223ENST00000640640 GRHPRQ9UBQ7 328 aa16.7■□□□□ 0.26
SCARB2-223ENST00000640640 RBM7Q9Y580 266 aaKnown RBP16.7■□□□□ 0.26
SCARB2-223ENST00000640640 ST14Q9Y5Y6 855 aa16.7■□□□□ 0.26
SCARB2-223ENST00000640640 MTHFD2P13995 350 aa16.7■□□□□ 0.26
SCARB2-223ENST00000640640 CERS1P27544 350 aa16.7■□□□□ 0.26
SCARB2-223ENST00000640640 SELPLGQ14242 412 aa16.7■□□□□ 0.26
SCARB2-223ENST00000640640 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.7■□□□□ 0.26
SCARB2-223ENST00000640640 GPR149Q86SP6 731 aa16.7■□□□□ 0.26
SCARB2-223ENST00000640640 TMEM156Q8N614 296 aa16.7■□□□□ 0.26
SCARB2-223ENST00000640640 TTTY10Q9BZA0 68 aa16.7■□□□□ 0.26
SCARB2-223ENST00000640640 SLC35F4A4IF30 521 aa16.7■□□□□ 0.26
SCARB2-223ENST00000640640 MRPL3P09001 348 aaKnown RBP16.7■□□□□ 0.26
SCARB2-223ENST00000640640 NDUFV2P19404 249 aa16.7■□□□□ 0.26
SCARB2-223ENST00000640640 STT3AP46977 705 aa16.7■□□□□ 0.26
SCARB2-223ENST00000640640 CDK5R2Q13319 367 aa16.7■□□□□ 0.26
SCARB2-223ENST00000640640 DNASE1L3Q13609 305 aa16.7■□□□□ 0.26
SCARB2-223ENST00000640640 CAMK1Q14012 370 aa16.7■□□□□ 0.26
SCARB2-223ENST00000640640 PRSS48Q7RTY5 328 aa16.7■□□□□ 0.26
SCARB2-223ENST00000640640 LINC01599Q8WXQ3 324 aa16.7■□□□□ 0.26
SCARB2-223ENST00000640640 UBR3Q6ZT12 1888 aa16.7■□□□□ 0.26
SCARB2-223ENST00000640640 A0A1B0GVT2 93 aa16.69■□□□□ 0.26
SCARB2-223ENST00000640640 FAM221BA6H8Z2 402 aa16.69■□□□□ 0.26
SCARB2-223ENST00000640640 GPR89AB7ZAQ6 455 aa16.69■□□□□ 0.26
SCARB2-223ENST00000640640 CLEC3AO75596 197 aa16.69■□□□□ 0.26
SCARB2-223ENST00000640640 OR2B3O76000 313 aa16.69■□□□□ 0.26
SCARB2-223ENST00000640640 ZDHHC11BP0C7U3 371 aa16.69■□□□□ 0.26
SCARB2-223ENST00000640640 GPR89BP0CG08 455 aa16.69■□□□□ 0.26
SCARB2-223ENST00000640640 DRD1P21728 446 aa16.69■□□□□ 0.26
SCARB2-223ENST00000640640 RABIFP47224 123 aa16.69■□□□□ 0.26
SCARB2-223ENST00000640640 NFATC3Q12968 1075 aa16.69■□□□□ 0.26
SCARB2-223ENST00000640640 HNRNPA0Q13151 305 aaKnown RBP16.69■□□□□ 0.26
SCARB2-223ENST00000640640 LRRC26Q2I0M4 334 aa16.69■□□□□ 0.26
SCARB2-223ENST00000640640 WSCD2Q2TBF2 565 aa16.69■□□□□ 0.26
SCARB2-223ENST00000640640 GTF2IRD2BQ6EKJ0 949 aa16.69■□□□□ 0.26
SCARB2-223ENST00000640640 SLC25A24Q6NUK1 477 aa16.69■□□□□ 0.26
SCARB2-223ENST00000640640 GTF2IRD2Q86UP8 949 aa16.69■□□□□ 0.26
SCARB2-223ENST00000640640 FUNDC1Q8IVP5 155 aa16.69■□□□□ 0.26
SCARB2-223ENST00000640640 ACOT4Q8N9L9 421 aa16.69■□□□□ 0.26
SCARB2-223ENST00000640640 OR2L5Q8NG80 312 aa16.69■□□□□ 0.26
SCARB2-223ENST00000640640 OR4K17Q8NGC6 315 aa16.69■□□□□ 0.26
SCARB2-223ENST00000640640 OR52E1Q8NGJ3 308 aa16.69■□□□□ 0.26
SCARB2-223ENST00000640640 ACTRT3Q9BYD9 372 aa16.69■□□□□ 0.26
SCARB2-223ENST00000640640 GMPR2Q9P2T1 348 aaKnown RBP16.69■□□□□ 0.26
SCARB2-223ENST00000640640 PMF1-BGLAPU3KQ54 211 aa16.69■□□□□ 0.26
SCARB2-223ENST00000640640 ARID1BQ8NFD5 2236 aaPredicted RBP16.69■□□□□ 0.26
SCARB2-223ENST00000640640 HYKKA2RU49 373 aa16.69■□□□□ 0.26
SCARB2-223ENST00000640640 M0R3H8 397 aa16.69■□□□□ 0.26
SCARB2-223ENST00000640640 IMPA1P29218 277 aa16.69■□□□□ 0.26
SCARB2-223ENST00000640640 DCDC1P59894 354 aa16.69■□□□□ 0.26
SCARB2-223ENST00000640640 ADAM8P78325 824 aa16.69■□□□□ 0.26
SCARB2-223ENST00000640640 MICAQ29983 383 aa16.69■□□□□ 0.26
SCARB2-223ENST00000640640 LMNTD1Q8N9Z9 388 aa16.69■□□□□ 0.26
SCARB2-223ENST00000640640 MTHFD2LQ9H903 347 aaPredicted RBP16.69■□□□□ 0.26
SCARB2-223ENST00000640640 A0A1W2PQ72 361 aa16.69■□□□□ 0.26
SCARB2-223ENST00000640640 HMGN2P05204 90 aaKnown RBP16.69■□□□□ 0.26
SCARB2-223ENST00000640640 GPR4P46093 362 aa16.69■□□□□ 0.26
SCARB2-223ENST00000640640 DEFB110Q30KQ9 67 aa16.69■□□□□ 0.26
SCARB2-223ENST00000640640 RPL13AP3Q6NVV1 102 aa16.69■□□□□ 0.26
SCARB2-223ENST00000640640 USP53Q70EK8 1073 aa16.69■□□□□ 0.26
SCARB2-223ENST00000640640 CENPSQ8N2Z9 138 aa16.69■□□□□ 0.26
SCARB2-223ENST00000640640 MACROD1Q9BQ69 325 aa16.69■□□□□ 0.26
SCARB2-223ENST00000640640 SEC61A2Q9H9S3 476 aa16.69■□□□□ 0.26
SCARB2-223ENST00000640640 TIGARQ9NQ88 270 aa16.69■□□□□ 0.26
SCARB2-223ENST00000640640 C17orf113A0A1B0GUU1 675 aa16.69■□□□□ 0.26
SCARB2-223ENST00000640640 ACVR1Q04771 509 aa16.69■□□□□ 0.26
SCARB2-223ENST00000640640 GGTA1PQ4G0N0 100 aa16.69■□□□□ 0.26
SCARB2-223ENST00000640640 FAM3CQ92520 227 aa16.69■□□□□ 0.26
SCARB2-223ENST00000640640 POLDIP3Q9BY77 421 aaKnown RBP16.69■□□□□ 0.26
SCARB2-223ENST00000640640 NMNAT1Q9HAN9 279 aaPredicted RBP16.69■□□□□ 0.26
SCARB2-223ENST00000640640 H3BQ06 376 aaPredicted RBP16.68■□□□□ 0.26
SCARB2-223ENST00000640640 DBIP07108 87 aaKnown RBP16.68■□□□□ 0.26
SCARB2-223ENST00000640640 GSTT2BP0CG30 244 aa16.68■□□□□ 0.26
SCARB2-223ENST00000640640 OSMP13725 252 aa16.68■□□□□ 0.26
SCARB2-223ENST00000640640 AK4P27144 223 aaPredicted RBP16.68■□□□□ 0.26
SCARB2-223ENST00000640640 P2RY2P41231 377 aa16.68■□□□□ 0.26
SCARB2-223ENST00000640640 ZNF45Q02386 682 aa16.68■□□□□ 0.26
SCARB2-223ENST00000640640 IRF4Q15306 451 aa16.68■□□□□ 0.26
SCARB2-223ENST00000640640 LRIT3Q3SXY7 679 aa16.68■□□□□ 0.26
SCARB2-223ENST00000640640 NEIL3Q8TAT5 605 aa16.68■□□□□ 0.26
SCARB2-223ENST00000640640 PELOQ9BRX2 385 aaKnown RBP16.68■□□□□ 0.26
SCARB2-223ENST00000640640 LHPPQ9H008 270 aa16.68■□□□□ 0.26
SCARB2-223ENST00000640640 ABI3Q9P2A4 366 aa16.68■□□□□ 0.26
SCARB2-223ENST00000640640 PCDHGA8Q9Y5G5 932 aa16.68■□□□□ 0.26
SCARB2-223ENST00000640640 UNC119BA6NIH7 251 aa16.68■□□□□ 0.26
SCARB2-223ENST00000640640 CLCA1A8K7I4 914 aa16.68■□□□□ 0.26
SCARB2-223ENST00000640640 H0YIV9 168 aa16.68■□□□□ 0.26
SCARB2-223ENST00000640640 HK3P52790 923 aa16.68■□□□□ 0.26
SCARB2-223ENST00000640640 COQ8BQ96D53 544 aa16.68■□□□□ 0.26
SCARB2-223ENST00000640640 PEX11GQ96HA9 241 aa16.68■□□□□ 0.26
SCARB2-223ENST00000640640 USP22Q9UPT9 525 aa16.68■□□□□ 0.26
SCARB2-223ENST00000640640 PCDHA9Q9Y5H5 950 aa16.68■□□□□ 0.26
SCARB2-223ENST00000640640 COL24A1Q17RW2 1714 aa16.68■□□□□ 0.26
SCARB2-223ENST00000640640 NPIPA5E9PKD4 350 aa16.68■□□□□ 0.26
SCARB2-223ENST00000640640 SOX1O00570 391 aaPredicted RBP16.68■□□□□ 0.26
SCARB2-223ENST00000640640 ITIH1P19827 911 aa16.68■□□□□ 0.26
SCARB2-223ENST00000640640 MC3RP41968 323 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms