RNA–Protein interactions for RNA: ENST00000639895.1

SPIN3-231, Transcript of spindlin family member 3, human

TSL 5

Gene SPIN3, Length 4,234 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIN3-231	ENST00000639895	KIAA1324	Q6UXG2	1013 aa	Known RBP	10.82	□□□□□ -0.68
SPIN3-231	ENST00000639895	UBE2R2	Q712K3	238 aa	Predicted RBP	10.82	□□□□□ -0.68
SPIN3-231	ENST00000639895	OR7G2	Q8NG99	324 aa		10.82	□□□□□ -0.68
SPIN3-231	ENST00000639895	OR4K1	Q8NGD4	311 aa		10.82	□□□□□ -0.68
SPIN3-231	ENST00000639895	OR5T3	Q8NGG3	340 aa		10.82	□□□□□ -0.68
SPIN3-231	ENST00000639895	RELT	Q969Z4	430 aa		10.82	□□□□□ -0.68
SPIN3-231	ENST00000639895	HMCES	Q96FZ2	354 aa		10.82	□□□□□ -0.68
SPIN3-231	ENST00000639895	FAM193B	Q96PV7	902 aa	Predicted RBP	10.82	□□□□□ -0.68
SPIN3-231	ENST00000639895	CD244	Q9BZW8	370 aa		10.82	□□□□□ -0.68
SPIN3-231	ENST00000639895	BRINP2	Q9C0B6	783 aa		10.82	□□□□□ -0.68
SPIN3-231	ENST00000639895	IKZF5	Q9H5V7	419 aa		10.82	□□□□□ -0.68
SPIN3-231	ENST00000639895	ATP13A1	Q9HD20	1204 aa		10.82	□□□□□ -0.68
SPIN3-231	ENST00000639895	KIF25	Q9UIL4	384 aa		10.82	□□□□□ -0.68
SPIN3-231	ENST00000639895	COL2A1	P02458	1487 aa	Predicted RBP	10.82	□□□□□ -0.68
SPIN3-231	ENST00000639895	TARM1	B6A8C7	271 aa		10.82	□□□□□ -0.68
SPIN3-231	ENST00000639895		E7EQ34	232 aa		10.82	□□□□□ -0.68
SPIN3-231	ENST00000639895	TSTD3	H0UI37	97 aa		10.82	□□□□□ -0.68
SPIN3-231	ENST00000639895		H3BRB1	525 aa		10.82	□□□□□ -0.68
SPIN3-231	ENST00000639895	GOSR2	O14653	212 aa		10.82	□□□□□ -0.68
SPIN3-231	ENST00000639895	SIGLEC6	O43699	453 aa		10.82	□□□□□ -0.68
SPIN3-231	ENST00000639895	HMGCL	P35914	325 aa		10.82	□□□□□ -0.68
SPIN3-231	ENST00000639895	MTAP	Q13126	283 aa		10.82	□□□□□ -0.68
SPIN3-231	ENST00000639895	METAP1D	Q6UB28	335 aa	Predicted RBP	10.82	□□□□□ -0.68
SPIN3-231	ENST00000639895	BCDIN3D	Q7Z5W3	292 aa	Known RBP	10.82	□□□□□ -0.68
SPIN3-231	ENST00000639895	CELF5	Q8N6W0	485 aa	Known RBP	10.82	□□□□□ -0.68
SPIN3-231	ENST00000639895	UPF1	Q92900	1129 aa	Known RBP eCLIP	10.82	□□□□□ -0.68
SPIN3-231	ENST00000639895	NT5C3B	Q969T7	300 aa		10.82	□□□□□ -0.68
SPIN3-231	ENST00000639895	NTAN1	Q96AB6	310 aa		10.82	□□□□□ -0.68
SPIN3-231	ENST00000639895	BBS4	Q96RK4	519 aa		10.82	□□□□□ -0.68
SPIN3-231	ENST00000639895	BTBD1	Q9H0C5	482 aa		10.82	□□□□□ -0.68
SPIN3-231	ENST00000639895	LDAH	Q9H6V9	325 aa		10.82	□□□□□ -0.68
SPIN3-231	ENST00000639895	WDR26	Q9H7D7	661 aa		10.82	□□□□□ -0.68
SPIN3-231	ENST00000639895	MYEF2	Q9P2K5	600 aa	Known RBP	10.82	□□□□□ -0.68
SPIN3-231	ENST00000639895	EXOSC1	Q9Y3B2	195 aa	Known RBP	10.82	□□□□□ -0.68
SPIN3-231	ENST00000639895		J3QLW9	94 aa		10.82	□□□□□ -0.68
SPIN3-231	ENST00000639895	STK25	O00506	426 aa		10.82	□□□□□ -0.68
SPIN3-231	ENST00000639895	ONECUT3	O60422	494 aa	Predicted RBP	10.82	□□□□□ -0.68
SPIN3-231	ENST00000639895	CS	O75390	466 aa	Known RBP	10.82	□□□□□ -0.68
SPIN3-231	ENST00000639895	ZNF19	P17023	458 aa		10.82	□□□□□ -0.68
SPIN3-231	ENST00000639895	ASMT	P46597	345 aa		10.82	□□□□□ -0.68
SPIN3-231	ENST00000639895	PREP	P48147	710 aa		10.82	□□□□□ -0.68
SPIN3-231	ENST00000639895	LHX1	P48742	406 aa		10.82	□□□□□ -0.68
SPIN3-231	ENST00000639895	DAOA	P59103	153 aa		10.82	□□□□□ -0.68
SPIN3-231	ENST00000639895	RHOA	P61586	193 aa		10.82	□□□□□ -0.68
SPIN3-231	ENST00000639895		Q6ZSR9	355 aa		10.82	□□□□□ -0.68
SPIN3-231	ENST00000639895	FAM124A	Q86V42	546 aa		10.82	□□□□□ -0.68
SPIN3-231	ENST00000639895	LRRC52	Q8N7C0	313 aa		10.82	□□□□□ -0.68
SPIN3-231	ENST00000639895	TOE1	Q96GM8	510 aa	Known RBP	10.82	□□□□□ -0.68
SPIN3-231	ENST00000639895	UBXN10	Q96LJ8	280 aa		10.82	□□□□□ -0.68
SPIN3-231	ENST00000639895	EPYC	Q99645	322 aa		10.82	□□□□□ -0.68
SPIN3-231	ENST00000639895	CMSS1	Q9BQ75	279 aa	Known RBP	10.82	□□□□□ -0.68
SPIN3-231	ENST00000639895	TTTY10	Q9BZA0	68 aa		10.82	□□□□□ -0.68
SPIN3-231	ENST00000639895	ZNF282	Q9UDV7	671 aa	Predicted RBP	10.82	□□□□□ -0.68
SPIN3-231	ENST00000639895	PCDHGC4	Q9Y5F7	938 aa		10.82	□□□□□ -0.68
SPIN3-231	ENST00000639895	ZNF559-ZNF177	A0A0A6YYI6	481 aa	Predicted RBP	10.81	□□□□□ -0.68
SPIN3-231	ENST00000639895	USP2	O75604	605 aa	Predicted RBP	10.81	□□□□□ -0.68
SPIN3-231	ENST00000639895	LY86	O95711	162 aa		10.81	□□□□□ -0.68
SPIN3-231	ENST00000639895	FDXR	P22570	491 aa		10.81	□□□□□ -0.68
SPIN3-231	ENST00000639895	VEGFC	P49767	419 aa		10.81	□□□□□ -0.68
SPIN3-231	ENST00000639895	MANF	P55145	182 aa	Known RBP	10.81	□□□□□ -0.68
SPIN3-231	ENST00000639895	ZNF177	Q13360	481 aa	Predicted RBP	10.81	□□□□□ -0.68
SPIN3-231	ENST00000639895	PAQR8	Q8TEZ7	354 aa		10.81	□□□□□ -0.68
SPIN3-231	ENST00000639895	ARL11	Q969Q4	196 aa		10.81	□□□□□ -0.68
SPIN3-231	ENST00000639895	NIPSNAP1	Q9BPW8	284 aa		10.81	□□□□□ -0.68
SPIN3-231	ENST00000639895	SYNDIG1	Q9H7V2	258 aa		10.81	□□□□□ -0.68
SPIN3-231	ENST00000639895	NMNAT1	Q9HAN9	279 aa	Predicted RBP	10.81	□□□□□ -0.68
SPIN3-231	ENST00000639895	POLM	Q9NP87	494 aa	Predicted RBP	10.81	□□□□□ -0.68
SPIN3-231	ENST00000639895	HEBP1	Q9NRV9	189 aa		10.81	□□□□□ -0.68
SPIN3-231	ENST00000639895	RPS6KB2	Q9UBS0	482 aa		10.81	□□□□□ -0.68
SPIN3-231	ENST00000639895	EXO1	Q9UQ84	846 aa	Known RBP	10.81	□□□□□ -0.68
SPIN3-231	ENST00000639895	PCDHB9	Q9Y5E1	797 aa		10.81	□□□□□ -0.68
SPIN3-231	ENST00000639895	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	10.81	□□□□□ -0.68
SPIN3-231	ENST00000639895	PTP4A3	O75365	173 aa		10.81	□□□□□ -0.68
SPIN3-231	ENST00000639895	KRT33A	O76009	404 aa		10.81	□□□□□ -0.68
SPIN3-231	ENST00000639895	ALDH1A1	P00352	501 aa		10.81	□□□□□ -0.68
SPIN3-231	ENST00000639895	IFNA4	P05014	189 aa		10.81	□□□□□ -0.68
SPIN3-231	ENST00000639895	PBLD	P30039	288 aa	Predicted RBP	10.81	□□□□□ -0.68
SPIN3-231	ENST00000639895	RBM34	P42696	430 aa	Known RBP	10.81	□□□□□ -0.68
SPIN3-231	ENST00000639895	MTNR1A	P48039	350 aa		10.81	□□□□□ -0.68
SPIN3-231	ENST00000639895	SLC27A1	Q6PCB7	646 aa		10.81	□□□□□ -0.68
SPIN3-231	ENST00000639895	OR4Q3	Q8NH05	313 aa		10.81	□□□□□ -0.68
SPIN3-231	ENST00000639895	AKR7L	Q8NHP1	331 aa		10.81	□□□□□ -0.68
SPIN3-231	ENST00000639895	CXorf58	Q96LI9	332 aa		10.81	□□□□□ -0.68
SPIN3-231	ENST00000639895	SLC19A3	Q9BZV2	496 aa		10.81	□□□□□ -0.68
SPIN3-231	ENST00000639895	SGK2	Q9HBY8	427 aa		10.81	□□□□□ -0.68
SPIN3-231	ENST00000639895	TRIM36	Q9NQ86	728 aa		10.81	□□□□□ -0.68
SPIN3-231	ENST00000639895	IL20	Q9NYY1	176 aa		10.81	□□□□□ -0.68
SPIN3-231	ENST00000639895	ELF5	Q9UKW6	265 aa	Predicted RBP	10.81	□□□□□ -0.68
SPIN3-231	ENST00000639895	MAFF	Q9ULX9	164 aa		10.81	□□□□□ -0.68
SPIN3-231	ENST00000639895	CBY1	Q9Y3M2	126 aa		10.81	□□□□□ -0.68
SPIN3-231	ENST00000639895	CASTOR2	A6NHX0	329 aa		10.81	□□□□□ -0.68
SPIN3-231	ENST00000639895	LGALS2	P05162	132 aa		10.81	□□□□□ -0.68
SPIN3-231	ENST00000639895	G0S2	P27469	103 aa		10.81	□□□□□ -0.68
SPIN3-231	ENST00000639895	ANXA11	P50995	505 aa	Known RBP	10.81	□□□□□ -0.68
SPIN3-231	ENST00000639895	VGLL4	Q14135	290 aa		10.81	□□□□□ -0.68
SPIN3-231	ENST00000639895	PAQR6	Q6TCH4	344 aa		10.81	□□□□□ -0.68
SPIN3-231	ENST00000639895	NAA40	Q86UY6	237 aa		10.81	□□□□□ -0.68
SPIN3-231	ENST00000639895	SIAH3	Q8IW03	269 aa		10.81	□□□□□ -0.68
SPIN3-231	ENST00000639895	OR6S1	Q8NH40	331 aa		10.81	□□□□□ -0.68
SPIN3-231	ENST00000639895	MRPL48	Q96GC5	212 aa	Known RBP	10.81	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms