RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 M0R233 179 aa4.11□□□□□ -1.75
SCN3A-209ENST00000639244 SPRP35270 261 aaPredicted RBP4.11□□□□□ -1.75
SCN3A-209ENST00000639244 TGM4P49221 684 aa4.11□□□□□ -1.75
SCN3A-209ENST00000639244 ZNF628Q5EBL2 1059 aa4.11□□□□□ -1.75
SCN3A-209ENST00000639244 WBP2NLQ6ICG8 309 aa4.11□□□□□ -1.75
SCN3A-209ENST00000639244 KLHL17Q6TDP4 642 aa4.11□□□□□ -1.75
SCN3A-209ENST00000639244 BAIAP2L2Q6UXY1 529 aa4.11□□□□□ -1.75
SCN3A-209ENST00000639244 RTN4RL2Q86UN3 420 aa4.11□□□□□ -1.75
SCN3A-209ENST00000639244 RANBP3LQ86VV4 465 aaPredicted RBP4.11□□□□□ -1.75
SCN3A-209ENST00000639244 ZNF383Q8NA42 475 aa4.11□□□□□ -1.75
SCN3A-209ENST00000639244 OR13F1Q8NGS4 319 aa4.11□□□□□ -1.75
SCN3A-209ENST00000639244 C1orf54Q8WWF1 131 aa4.11□□□□□ -1.75
SCN3A-209ENST00000639244 PSMG2Q969U7 264 aa4.11□□□□□ -1.75
SCN3A-209ENST00000639244 AKR1E2Q96JD6 320 aa4.11□□□□□ -1.75
SCN3A-209ENST00000639244 CLSTN3Q9BQT9 956 aa4.11□□□□□ -1.75
SCN3A-209ENST00000639244 FICDQ9BVA6 458 aa4.11□□□□□ -1.75
SCN3A-209ENST00000639244 CD244Q9BZW8 370 aa4.11□□□□□ -1.75
SCN3A-209ENST00000639244 SRRQ9GZT4 340 aa4.11□□□□□ -1.75
SCN3A-209ENST00000639244 IL21RQ9HBE5 538 aa4.11□□□□□ -1.75
SCN3A-209ENST00000639244 ZFYVE1Q9HBF4 777 aa4.11□□□□□ -1.75
SCN3A-209ENST00000639244 AKIP1Q9NQ31 210 aa4.11□□□□□ -1.75
SCN3A-209ENST00000639244 NECTIN3Q9NQS3 549 aa4.11□□□□□ -1.75
SCN3A-209ENST00000639244 YAE1D1Q9NRH1 226 aa4.11□□□□□ -1.75
SCN3A-209ENST00000639244 SLC2A9Q9NRM0 540 aa4.11□□□□□ -1.75
SCN3A-209ENST00000639244 ZNF639Q9UID6 485 aa4.11□□□□□ -1.75
SCN3A-209ENST00000639244 FARSAQ9Y285 508 aaKnown RBP4.11□□□□□ -1.75
SCN3A-209ENST00000639244 PDCD11Q14690 1871 aaKnown RBP4.11□□□□□ -1.75
SCN3A-209ENST00000639244 MEX3AA1L020 520 aaKnown RBP4.11□□□□□ -1.75
SCN3A-209ENST00000639244 GOSR2O14653 212 aa4.11□□□□□ -1.75
SCN3A-209ENST00000639244 ATXN7O15265 892 aaPredicted RBP4.11□□□□□ -1.75
SCN3A-209ENST00000639244 SUSD5O60279 629 aa4.11□□□□□ -1.75
SCN3A-209ENST00000639244 ZIC2O95409 532 aaPredicted RBP4.11□□□□□ -1.75
SCN3A-209ENST00000639244 PPBPP02775 128 aa4.11□□□□□ -1.75
SCN3A-209ENST00000639244 ITGA3P26006 1051 aa4.11□□□□□ -1.75
SCN3A-209ENST00000639244 CD82P27701 267 aa4.11□□□□□ -1.75
SCN3A-209ENST00000639244 SERPINA4P29622 427 aa4.11□□□□□ -1.75
SCN3A-209ENST00000639244 BAG6P46379 1132 aa4.11□□□□□ -1.75
SCN3A-209ENST00000639244 FASLGP48023 281 aa4.11□□□□□ -1.75
SCN3A-209ENST00000639244 PPP3CAQ08209 521 aa4.11□□□□□ -1.75
SCN3A-209ENST00000639244 RSU1Q15404 277 aa4.11□□□□□ -1.75
SCN3A-209ENST00000639244 FAM153CQ494X1 144 aa4.11□□□□□ -1.75
SCN3A-209ENST00000639244 NCR3LG1Q68D85 454 aa4.11□□□□□ -1.75
SCN3A-209ENST00000639244 ZC3H14Q6PJT7 736 aaKnown RBP4.11□□□□□ -1.75
SCN3A-209ENST00000639244 GCNT7Q6ZNI0 430 aa4.11□□□□□ -1.75
SCN3A-209ENST00000639244 NANOGP1Q8N7R0 232 aa4.11□□□□□ -1.75
SCN3A-209ENST00000639244 TMEM161BQ8NDZ6 487 aa4.11□□□□□ -1.75
SCN3A-209ENST00000639244 BRI3BPQ8WY22 251 aa4.11□□□□□ -1.75
SCN3A-209ENST00000639244 CMBLQ96DG6 245 aa4.11□□□□□ -1.75
SCN3A-209ENST00000639244 CMTM5Q96DZ9 223 aa4.11□□□□□ -1.75
SCN3A-209ENST00000639244 GAR1Q9NY12 217 aaKnown RBP4.11□□□□□ -1.75
SCN3A-209ENST00000639244 AHSPQ9NZD4 102 aa4.11□□□□□ -1.75
SCN3A-209ENST00000639244 SLC17A7Q9P2U7 560 aa4.11□□□□□ -1.75
SCN3A-209ENST00000639244 SEC14L3Q9UDX4 400 aa4.11□□□□□ -1.75
SCN3A-209ENST00000639244 DKKL1Q9UK85 242 aa4.11□□□□□ -1.75
SCN3A-209ENST00000639244 BNIP3LO60238 219 aa4.11□□□□□ -1.75
SCN3A-209ENST00000639244 UBCP0CG48 685 aaKnown RBP4.11□□□□□ -1.75
SCN3A-209ENST00000639244 C21orf33P30042 268 aaPredicted RBP4.11□□□□□ -1.75
SCN3A-209ENST00000639244 EPHX2P34913 555 aa4.11□□□□□ -1.75
SCN3A-209ENST00000639244 EMP2P54851 167 aa4.11□□□□□ -1.75
SCN3A-209ENST00000639244 B4GALNT1Q00973 533 aa4.11□□□□□ -1.75
SCN3A-209ENST00000639244 GPR17Q13304 367 aa4.11□□□□□ -1.75
SCN3A-209ENST00000639244 MEP1BQ16820 701 aa4.11□□□□□ -1.75
SCN3A-209ENST00000639244 GAB4Q2WGN9 574 aa4.11□□□□□ -1.75
SCN3A-209ENST00000639244 WDR88Q6ZMY6 472 aa4.11□□□□□ -1.75
SCN3A-209ENST00000639244 LRTOMTQ8WZ04 291 aa4.11□□□□□ -1.75
SCN3A-209ENST00000639244 PABPC5Q96DU9 382 aaKnown RBP4.11□□□□□ -1.75
SCN3A-209ENST00000639244 TBC1D24Q9ULP9 559 aa4.11□□□□□ -1.75
SCN3A-209ENST00000639244 NENFQ9UMX5 172 aa4.11□□□□□ -1.75
SCN3A-209ENST00000639244 ADCY10Q96PN6 1610 aa4.11□□□□□ -1.75
SCN3A-209ENST00000639244 A0A1B0GTH6 734 aa4.11□□□□□ -1.75
SCN3A-209ENST00000639244 E7ENX8 843 aa4.11□□□□□ -1.75
SCN3A-209ENST00000639244 K7EQM0 130 aa4.11□□□□□ -1.75
SCN3A-209ENST00000639244 AKAP3O75969 853 aa4.11□□□□□ -1.75
SCN3A-209ENST00000639244 A1BGP04217 495 aa4.11□□□□□ -1.75
SCN3A-209ENST00000639244 NME1P15531 152 aaKnown RBP4.11□□□□□ -1.75
SCN3A-209ENST00000639244 GPR12P47775 334 aa4.11□□□□□ -1.75
SCN3A-209ENST00000639244 RAB11AP62491 216 aa4.11□□□□□ -1.75
SCN3A-209ENST00000639244 N4BP2L1Q5TBK1 243 aaPredicted RBP4.11□□□□□ -1.75
SCN3A-209ENST00000639244 OGFRL1Q5TC84 451 aaPredicted RBP4.11□□□□□ -1.75
SCN3A-209ENST00000639244 C9orf135Q5VTT2 229 aa4.11□□□□□ -1.75
SCN3A-209ENST00000639244 BTNL3Q6UXE8 466 aa4.11□□□□□ -1.75
SCN3A-209ENST00000639244 FUNDC1Q8IVP5 155 aa4.11□□□□□ -1.75
SCN3A-209ENST00000639244 MCFD2Q8NI22 146 aa4.11□□□□□ -1.75
SCN3A-209ENST00000639244 ZFP90Q8TF47 636 aa4.11□□□□□ -1.75
SCN3A-209ENST00000639244 PHF10Q8WUB8 498 aaKnown RBP4.11□□□□□ -1.75
SCN3A-209ENST00000639244 MRGPRFQ96AM1 343 aa4.11□□□□□ -1.75
SCN3A-209ENST00000639244 MARS2Q96GW9 593 aaKnown RBP4.11□□□□□ -1.75
SCN3A-209ENST00000639244 ZNF607Q96SK3 696 aa4.11□□□□□ -1.75
SCN3A-209ENST00000639244 TLR10Q9BXR5 811 aa4.11□□□□□ -1.75
SCN3A-209ENST00000639244 NHEJ1Q9H9Q4 299 aaPredicted RBP4.11□□□□□ -1.75
SCN3A-209ENST00000639244 IMP3Q9NV31 184 aaKnown RBP4.11□□□□□ -1.75
SCN3A-209ENST00000639244 FAM118AQ9NWS6 357 aa4.11□□□□□ -1.75
SCN3A-209ENST00000639244 TAS2R13Q9NYV9 303 aa4.11□□□□□ -1.75
SCN3A-209ENST00000639244 PHF11Q9UIL8 331 aa4.11□□□□□ -1.75
SCN3A-209ENST00000639244 KCNG2Q9UJ96 466 aa4.11□□□□□ -1.75
SCN3A-209ENST00000639244 NIP7Q9Y221 180 aaKnown RBP eCLIP4.11□□□□□ -1.75
SCN3A-209ENST00000639244 CORINQ9Y5Q5 1042 aa4.11□□□□□ -1.75
SCN3A-209ENST00000639244 ZC3H13Q5T200 1668 aaKnown RBP4.11□□□□□ -1.75
SCN3A-209ENST00000639244 SNAPC4Q5SXM2 1469 aa4.11□□□□□ -1.75
SCN3A-209ENST00000639244 A0A096LPI6 279 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms