RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 UNQ6494/PRO21346Q6UXR6 183 aa6.28□□□□□ -1.4
UPF3B-205ENST00000636792 CPEB2Q7Z5Q1 589 aaKnown RBP6.28□□□□□ -1.4
UPF3B-205ENST00000636792 ARPINQ7Z6K5 226 aa6.28□□□□□ -1.4
UPF3B-205ENST00000636792 PROSER1Q86XN7 944 aa6.28□□□□□ -1.4
UPF3B-205ENST00000636792 TICAM1Q8IUC6 712 aa6.28□□□□□ -1.4
UPF3B-205ENST00000636792 GALNT12Q8IXK2 581 aa6.28□□□□□ -1.4
UPF3B-205ENST00000636792 LGI4Q8N135 537 aa6.28□□□□□ -1.4
UPF3B-205ENST00000636792 DPP10Q8N608 796 aa6.28□□□□□ -1.4
UPF3B-205ENST00000636792 METTL27Q8N6F8 245 aaPredicted RBP6.28□□□□□ -1.4
UPF3B-205ENST00000636792 TMEM102Q8N9M5 508 aaPredicted RBP6.28□□□□□ -1.4
UPF3B-205ENST00000636792 PCYOX1LQ8NBM8 494 aa6.28□□□□□ -1.4
UPF3B-205ENST00000636792 C17orf47Q8NEP4 570 aa6.28□□□□□ -1.4
UPF3B-205ENST00000636792 OR7G1Q8NGA0 311 aa6.28□□□□□ -1.4
UPF3B-205ENST00000636792 GOT1L1Q8NHS2 421 aaPredicted RBP6.28□□□□□ -1.4
UPF3B-205ENST00000636792 M1APQ8TC57 530 aa6.28□□□□□ -1.4
UPF3B-205ENST00000636792 SFXN5Q8TD22 340 aa6.28□□□□□ -1.4
UPF3B-205ENST00000636792 ADAMTS17Q8TE56 1095 aa6.28□□□□□ -1.4
UPF3B-205ENST00000636792 SNRNP27Q8WVK2 155 aaKnown RBP6.28□□□□□ -1.4
UPF3B-205ENST00000636792 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.28□□□□□ -1.4
UPF3B-205ENST00000636792 ANKRD9Q96BM1 317 aaPredicted RBP6.28□□□□□ -1.4
UPF3B-205ENST00000636792 CTHRC1Q96CG8 243 aa6.28□□□□□ -1.4
UPF3B-205ENST00000636792 CMTM5Q96DZ9 223 aa6.28□□□□□ -1.4
UPF3B-205ENST00000636792 CNRIP1Q96F85 164 aaPredicted RBP6.28□□□□□ -1.4
UPF3B-205ENST00000636792 RBM18Q96H35 190 aaKnown RBP6.28□□□□□ -1.4
UPF3B-205ENST00000636792 FBXL20Q96IG2 436 aa6.28□□□□□ -1.4
UPF3B-205ENST00000636792 EGLN2Q96KS0 407 aa6.28□□□□□ -1.4
UPF3B-205ENST00000636792 ZNF681Q96N22 645 aa6.28□□□□□ -1.4
UPF3B-205ENST00000636792 PTCHD1Q96NR3 888 aa6.28□□□□□ -1.4
UPF3B-205ENST00000636792 CCDC115Q96NT0 180 aa6.28□□□□□ -1.4
UPF3B-205ENST00000636792 BBS4Q96RK4 519 aa6.28□□□□□ -1.4
UPF3B-205ENST00000636792 YIPF2Q9BWQ6 316 aa6.28□□□□□ -1.4
UPF3B-205ENST00000636792 SORBS1Q9BX66 1292 aaKnown RBP6.28□□□□□ -1.4
UPF3B-205ENST00000636792 NMUR2Q9GZQ4 415 aa6.28□□□□□ -1.4
UPF3B-205ENST00000636792 ZNF700Q9H0M5 742 aa6.28□□□□□ -1.4
UPF3B-205ENST00000636792 MYLK2Q9H1R3 596 aa6.28□□□□□ -1.4
UPF3B-205ENST00000636792 C3orf14Q9HBI5 128 aa6.28□□□□□ -1.4
UPF3B-205ENST00000636792 NDE1Q9NXR1 346 aa6.28□□□□□ -1.4
UPF3B-205ENST00000636792 TAS2R9Q9NYW1 312 aa6.28□□□□□ -1.4
UPF3B-205ENST00000636792 NTMQ9P121 344 aa6.28□□□□□ -1.4
UPF3B-205ENST00000636792 HEY2Q9UBP5 337 aa6.28□□□□□ -1.4
UPF3B-205ENST00000636792 COPS7AQ9UBW8 275 aa6.28□□□□□ -1.4
UPF3B-205ENST00000636792 GIMAP2Q9UG22 337 aa6.28□□□□□ -1.4
UPF3B-205ENST00000636792 CORO2BQ9UQ03 480 aa6.28□□□□□ -1.4
UPF3B-205ENST00000636792 EXO1Q9UQ84 846 aaKnown RBP6.28□□□□□ -1.4
UPF3B-205ENST00000636792 POLHQ9Y253 713 aa6.28□□□□□ -1.4
UPF3B-205ENST00000636792 MAN2B2Q9Y2E5 1009 aa6.28□□□□□ -1.4
UPF3B-205ENST00000636792 AP3M1Q9Y2T2 418 aa6.28□□□□□ -1.4
UPF3B-205ENST00000636792 CLDN16Q9Y5I7 305 aa6.28□□□□□ -1.4
UPF3B-205ENST00000636792 CPAMD8Q8IZJ3 1885 aa6.28□□□□□ -1.4
UPF3B-205ENST00000636792 ACACAQ13085 2346 aa6.27□□□□□ -1.41
UPF3B-205ENST00000636792 IGHV1-45A0A0A0MS14 117 aa6.27□□□□□ -1.41
UPF3B-205ENST00000636792 NSG1A0A0A6YYJ2 146 aa6.27□□□□□ -1.41
UPF3B-205ENST00000636792 TEX51A0A1B0GUA7 166 aa6.27□□□□□ -1.41
UPF3B-205ENST00000636792 A0A1W2PRB8 838 aa6.27□□□□□ -1.41
UPF3B-205ENST00000636792 CCDC154A6NI56 674 aa6.27□□□□□ -1.41
UPF3B-205ENST00000636792 GABRR3A8MPY1 467 aa6.27□□□□□ -1.41
UPF3B-205ENST00000636792 FCHO1O14526 889 aa6.27□□□□□ -1.41
UPF3B-205ENST00000636792 ANGPT2O15123 496 aa6.27□□□□□ -1.41
UPF3B-205ENST00000636792 PGRMC2O15173 223 aa6.27□□□□□ -1.41
UPF3B-205ENST00000636792 TLX3O43711 291 aaPredicted RBP6.27□□□□□ -1.41
UPF3B-205ENST00000636792 OR10H2O60403 315 aa6.27□□□□□ -1.41
UPF3B-205ENST00000636792 PRAMEF2O60811 474 aa6.27□□□□□ -1.41
UPF3B-205ENST00000636792 SCN2BO60939 215 aa6.27□□□□□ -1.41
UPF3B-205ENST00000636792 CNOT3O75175 753 aaKnown RBP6.27□□□□□ -1.41
UPF3B-205ENST00000636792 DEAF1O75398 565 aaPredicted RBP6.27□□□□□ -1.41
UPF3B-205ENST00000636792 ERN1O75460 977 aaKnown RBP6.27□□□□□ -1.41
UPF3B-205ENST00000636792 ERAL1O75616 437 aaKnown RBP6.27□□□□□ -1.41
UPF3B-205ENST00000636792 AGR2O95994 175 aa6.27□□□□□ -1.41
UPF3B-205ENST00000636792 B3GALT4O96024 378 aa6.27□□□□□ -1.41
UPF3B-205ENST00000636792 IGLV1-40P01703 118 aa6.27□□□□□ -1.41
UPF3B-205ENST00000636792 SNRPB2P08579 225 aaKnown RBP6.27□□□□□ -1.41
UPF3B-205ENST00000636792 LIFP15018 202 aa6.27□□□□□ -1.41
UPF3B-205ENST00000636792 MAOAP21397 527 aa6.27□□□□□ -1.41
UPF3B-205ENST00000636792 XKP51811 444 aa6.27□□□□□ -1.41
UPF3B-205ENST00000636792 SOX8P57073 446 aa6.27□□□□□ -1.41
UPF3B-205ENST00000636792 TMPRSS3P57727 454 aa6.27□□□□□ -1.41
UPF3B-205ENST00000636792 OR4D2P58180 307 aa6.27□□□□□ -1.41
UPF3B-205ENST00000636792 UFM1P61960 85 aa6.27□□□□□ -1.41
UPF3B-205ENST00000636792 DCAF7P61962 342 aa6.27□□□□□ -1.41
UPF3B-205ENST00000636792 GABPB1Q06547 395 aaPredicted RBP6.27□□□□□ -1.41
UPF3B-205ENST00000636792 FUT7Q11130 342 aa6.27□□□□□ -1.41
UPF3B-205ENST00000636792 CDC20Q12834 499 aa6.27□□□□□ -1.41
UPF3B-205ENST00000636792 KLF10Q13118 480 aa6.27□□□□□ -1.41
UPF3B-205ENST00000636792 MAPKAPK3Q16644 382 aa6.27□□□□□ -1.41
UPF3B-205ENST00000636792 PRICKLE4Q2TBC4 344 aa6.27□□□□□ -1.41
UPF3B-205ENST00000636792 VPS26BQ4G0F5 336 aa6.27□□□□□ -1.41
UPF3B-205ENST00000636792 SPANXN4Q5MJ08 99 aa6.27□□□□□ -1.41
UPF3B-205ENST00000636792 LRIF1Q5T3J3 769 aa6.27□□□□□ -1.41
UPF3B-205ENST00000636792 PLAG1Q6DJT9 500 aa6.27□□□□□ -1.41
UPF3B-205ENST00000636792 LCN10Q6JVE6 187 aa6.27□□□□□ -1.41
UPF3B-205ENST00000636792 JMJD6Q6NYC1 403 aaPredicted RBP6.27□□□□□ -1.41
UPF3B-205ENST00000636792 FAM199XQ6PEV8 388 aaPredicted RBP6.27□□□□□ -1.41
UPF3B-205ENST00000636792 HACD2Q6Y1H2 254 aa6.27□□□□□ -1.41
UPF3B-205ENST00000636792 ANKRD37Q7Z713 158 aa6.27□□□□□ -1.41
UPF3B-205ENST00000636792 MRGPREQ86SM8 312 aa6.27□□□□□ -1.41
UPF3B-205ENST00000636792 HPS6Q86YV9 775 aa6.27□□□□□ -1.41
UPF3B-205ENST00000636792 KBTBD2Q8IY47 623 aa6.27□□□□□ -1.41
UPF3B-205ENST00000636792 DND1Q8IYX4 353 aaKnown RBP6.27□□□□□ -1.41
UPF3B-205ENST00000636792 DEPDC4Q8N2C3 294 aa6.27□□□□□ -1.41
UPF3B-205ENST00000636792 ARMC10Q8N2F6 343 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms