RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 CARM1Q86X55 608 aa17.05■□□□□ 0.32
CACNA1A-227ENST00000636549 SLC30A8Q8IWU4 369 aa17.05■□□□□ 0.32
CACNA1A-227ENST00000636549 DAZLQ92904 295 aaKnown RBP17.05■□□□□ 0.32
CACNA1A-227ENST00000636549 RPF2Q9H7B2 306 aaKnown RBP17.05■□□□□ 0.32
CACNA1A-227ENST00000636549 CAPN5O15484 640 aaPredicted RBP17.05■□□□□ 0.32
CACNA1A-227ENST00000636549 STOMP27105 288 aa17.05■□□□□ 0.32
CACNA1A-227ENST00000636549 HSD17B8Q92506 261 aa17.05■□□□□ 0.32
CACNA1A-227ENST00000636549 RPA2P15927 270 aa17.05■□□□□ 0.32
CACNA1A-227ENST00000636549 ZNF585AQ6P3V2 769 aa17.05■□□□□ 0.32
CACNA1A-227ENST00000636549 RXFP3Q9NSD7 469 aa17.05■□□□□ 0.32
CACNA1A-227ENST00000636549 THUMPD1Q9NXG2 353 aaKnown RBP17.05■□□□□ 0.32
CACNA1A-227ENST00000636549 LDB3O75112 727 aa17.04■□□□□ 0.32
CACNA1A-227ENST00000636549 ZNF254O75437 659 aa17.04■□□□□ 0.32
CACNA1A-227ENST00000636549 ERVK-16P61578 105 aa17.04■□□□□ 0.32
CACNA1A-227ENST00000636549 SF3A2Q15428 464 aaKnown RBP17.04■□□□□ 0.32
CACNA1A-227ENST00000636549 CST6Q15828 149 aa17.04■□□□□ 0.32
CACNA1A-227ENST00000636549 PRAMEF8Q5VWM4 474 aa17.04■□□□□ 0.32
CACNA1A-227ENST00000636549 PRAMEF7Q5VXH5 474 aa17.04■□□□□ 0.32
CACNA1A-227ENST00000636549 MYLIPQ8WY64 445 aa17.04■□□□□ 0.32
CACNA1A-227ENST00000636549 FAM46BQ96A09 425 aa17.04■□□□□ 0.32
CACNA1A-227ENST00000636549 OR52B2Q96RD2 323 aa17.04■□□□□ 0.32
CACNA1A-227ENST00000636549 NDUFAF4Q9P032 175 aa17.04■□□□□ 0.32
CACNA1A-227ENST00000636549 A8MT66 165 aa17.04■□□□□ 0.32
CACNA1A-227ENST00000636549 SOD2P04179 222 aa17.04■□□□□ 0.32
CACNA1A-227ENST00000636549 ZNF14P17017 642 aaPredicted RBP17.04■□□□□ 0.32
CACNA1A-227ENST00000636549 TNFSF4P23510 183 aa17.04■□□□□ 0.32
CACNA1A-227ENST00000636549 LIN37Q96GY3 246 aaPredicted RBP17.04■□□□□ 0.32
CACNA1A-227ENST00000636549 CADM1Q9BY67 442 aaKnown RBP17.04■□□□□ 0.32
CACNA1A-227ENST00000636549 ADAMTS10Q9H324 1103 aa17.04■□□□□ 0.32
CACNA1A-227ENST00000636549 SCML2Q9UQR0 700 aa17.04■□□□□ 0.32
CACNA1A-227ENST00000636549 PCDHGA1Q9Y5H4 931 aa17.04■□□□□ 0.32
CACNA1A-227ENST00000636549 HES5Q5TA89 166 aa17.04■□□□□ 0.32
CACNA1A-227ENST00000636549 Q6ZSR6 202 aa17.04■□□□□ 0.32
CACNA1A-227ENST00000636549 SERINC2Q96SA4 455 aa17.04■□□□□ 0.32
CACNA1A-227ENST00000636549 PAAF1Q9BRP4 392 aa17.04■□□□□ 0.32
CACNA1A-227ENST00000636549 TRBV2A0A0J9YWF9 115 aa17.04■□□□□ 0.32
CACNA1A-227ENST00000636549 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.04■□□□□ 0.32
CACNA1A-227ENST00000636549 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.04■□□□□ 0.32
CACNA1A-227ENST00000636549 EPCAMP16422 314 aa17.04■□□□□ 0.32
CACNA1A-227ENST00000636549 S100A12P80511 92 aa17.04■□□□□ 0.32
CACNA1A-227ENST00000636549 OR8B8Q15620 311 aa17.04■□□□□ 0.32
CACNA1A-227ENST00000636549 PLXDC1Q8IUK5 500 aa17.04■□□□□ 0.32
CACNA1A-227ENST00000636549 NPAS3Q8IXF0 933 aa17.04■□□□□ 0.32
CACNA1A-227ENST00000636549 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.04■□□□□ 0.32
CACNA1A-227ENST00000636549 COG8Q96MW5 612 aa17.04■□□□□ 0.32
CACNA1A-227ENST00000636549 CD244Q9BZW8 370 aa17.04■□□□□ 0.32
CACNA1A-227ENST00000636549 ZNF821O75541 412 aaPredicted RBP17.04■□□□□ 0.32
CACNA1A-227ENST00000636549 VEGFBP49765 207 aa17.04■□□□□ 0.32
CACNA1A-227ENST00000636549 TBPL1P62380 186 aa17.04■□□□□ 0.32
CACNA1A-227ENST00000636549 RNF4P78317 190 aa17.04■□□□□ 0.32
CACNA1A-227ENST00000636549 PLCXD3Q63HM9 321 aa17.04■□□□□ 0.32
CACNA1A-227ENST00000636549 TRAM1L1Q8N609 369 aa17.04■□□□□ 0.32
CACNA1A-227ENST00000636549 OSTF1Q92882 214 aa17.04■□□□□ 0.32
CACNA1A-227ENST00000636549 SENP5Q96HI0 755 aaPredicted RBP17.04■□□□□ 0.32
CACNA1A-227ENST00000636549 EFCAB11Q9BUY7 163 aa17.04■□□□□ 0.32
CACNA1A-227ENST00000636549 IMPDH1P20839 514 aa17.04■□□□□ 0.32
CACNA1A-227ENST00000636549 RORAP35398 523 aa17.04■□□□□ 0.32
CACNA1A-227ENST00000636549 EIF2B1Q14232 305 aaKnown RBP17.04■□□□□ 0.32
CACNA1A-227ENST00000636549 KLBQ86Z14 1044 aa17.04■□□□□ 0.32
CACNA1A-227ENST00000636549 MYADML2A6NDP7 307 aa17.03■□□□□ 0.32
CACNA1A-227ENST00000636549 HMX3A6NHT5 357 aa17.03■□□□□ 0.32
CACNA1A-227ENST00000636549 I3L521 148 aa17.03■□□□□ 0.32
CACNA1A-227ENST00000636549 DIRAS3O95661 229 aa17.03■□□□□ 0.32
CACNA1A-227ENST00000636549 FBXW12Q6X9E4 464 aa17.03■□□□□ 0.32
CACNA1A-227ENST00000636549 NSUN5Q96P11 429 aaKnown RBP17.03■□□□□ 0.32
CACNA1A-227ENST00000636549 C1QTNF6Q9BXI9 259 aa17.03■□□□□ 0.32
CACNA1A-227ENST00000636549 POLR1CO15160 346 aaPredicted RBP17.03■□□□□ 0.32
CACNA1A-227ENST00000636549 DOC2AQ14183 400 aa17.03■□□□□ 0.32
CACNA1A-227ENST00000636549 MPP7Q5T2T1 576 aa17.03■□□□□ 0.32
CACNA1A-227ENST00000636549 SLC43A2Q8N370 569 aa17.03■□□□□ 0.32
CACNA1A-227ENST00000636549 OR56A3Q8NH54 315 aa17.03■□□□□ 0.32
CACNA1A-227ENST00000636549 CIDECQ96AQ7 238 aaPredicted RBP17.03■□□□□ 0.32
CACNA1A-227ENST00000636549 H6PDO95479 791 aa17.03■□□□□ 0.32
CACNA1A-227ENST00000636549 GKN3PP0CG01 181 aa17.03■□□□□ 0.32
CACNA1A-227ENST00000636549 TSFMP43897 325 aaKnown RBP17.03■□□□□ 0.32
CACNA1A-227ENST00000636549 APOFQ13790 326 aa17.03■□□□□ 0.32
CACNA1A-227ENST00000636549 ZNF641Q96N77 438 aaPredicted RBP17.03■□□□□ 0.32
CACNA1A-227ENST00000636549 VRK1Q99986 396 aaPredicted RBP17.03■□□□□ 0.32
CACNA1A-227ENST00000636549 PRODH2Q9UF12 536 aa17.03■□□□□ 0.32
CACNA1A-227ENST00000636549 NPHS1O60500 1241 aa17.03■□□□□ 0.32
CACNA1A-227ENST00000636549 PRSS56P0CW18 603 aa17.03■□□□□ 0.32
CACNA1A-227ENST00000636549 HAPLN1P10915 354 aaPredicted RBP17.03■□□□□ 0.32
CACNA1A-227ENST00000636549 BMP6P22004 513 aa17.03■□□□□ 0.32
CACNA1A-227ENST00000636549 RUNX3Q13761 415 aa17.03■□□□□ 0.32
CACNA1A-227ENST00000636549 GLT8D1Q68CQ7 371 aa17.03■□□□□ 0.32
CACNA1A-227ENST00000636549 ADGRD1Q6QNK2 874 aa17.03■□□□□ 0.32
CACNA1A-227ENST00000636549 PPP1R3DO95685 299 aa17.03■□□□□ 0.32
CACNA1A-227ENST00000636549 TAP2Q03519 686 aa17.03■□□□□ 0.32
CACNA1A-227ENST00000636549 TLE3Q04726 772 aa17.03■□□□□ 0.32
CACNA1A-227ENST00000636549 IL20RBQ6UXL0 311 aa17.03■□□□□ 0.32
CACNA1A-227ENST00000636549 NANOS1Q8WY41 292 aaKnown RBP17.03■□□□□ 0.32
CACNA1A-227ENST00000636549 TWNKQ96RR1 684 aa17.03■□□□□ 0.32
CACNA1A-227ENST00000636549 MATN2O00339 956 aa17.02■□□□□ 0.32
CACNA1A-227ENST00000636549 SLC7A4O43246 635 aa17.02■□□□□ 0.32
CACNA1A-227ENST00000636549 TUSC2O75896 110 aa17.02■□□□□ 0.32
CACNA1A-227ENST00000636549 IL1AP01583 271 aa17.02■□□□□ 0.32
CACNA1A-227ENST00000636549 RRNAD1Q96FB5 475 aaKnown RBP17.02■□□□□ 0.32
CACNA1A-227ENST00000636549 GPR62Q9BZJ7 368 aa17.02■□□□□ 0.32
CACNA1A-227ENST00000636549 DHX33Q9H6R0 707 aaKnown RBP17.02■□□□□ 0.32
CACNA1A-227ENST00000636549 PCDHB16Q9NRJ7 776 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms