RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 SARNPP82979 210 aaKnown RBP16.4■□□□□ 0.22
CLN6-212ENST00000636020 CCNG2Q16589 344 aa16.4■□□□□ 0.22
CLN6-212ENST00000636020 KCTD19Q17RG1 926 aaPredicted RBP16.4■□□□□ 0.22
CLN6-212ENST00000636020 SPRED3Q2MJR0 410 aa16.4■□□□□ 0.22
CLN6-212ENST00000636020 SEL1L2Q5TEA6 688 aa16.4■□□□□ 0.22
CLN6-212ENST00000636020 DRICH1Q6PGQ1 229 aaPredicted RBP16.4■□□□□ 0.22
CLN6-212ENST00000636020 P4HA3Q7Z4N8 544 aa16.4■□□□□ 0.22
CLN6-212ENST00000636020 ST13P4Q8IZP2 240 aaPredicted RBP16.4■□□□□ 0.22
CLN6-212ENST00000636020 C2CD4AQ8NCU7 369 aaPredicted RBP16.4■□□□□ 0.22
CLN6-212ENST00000636020 AKAP1Q92667 903 aaKnown RBP eCLIP16.4■□□□□ 0.22
CLN6-212ENST00000636020 KCNK17Q96T54 332 aa16.4■□□□□ 0.22
CLN6-212ENST00000636020 TBCDQ9BTW9 1192 aa16.4■□□□□ 0.22
CLN6-212ENST00000636020 HEY2Q9UBP5 337 aa16.4■□□□□ 0.22
CLN6-212ENST00000636020 LPAR3Q9UBY5 353 aa16.4■□□□□ 0.22
CLN6-212ENST00000636020 MAGEA6P43360 314 aa16.39■□□□□ 0.21
CLN6-212ENST00000636020 CLDN18P56856 261 aa16.39■□□□□ 0.21
CLN6-212ENST00000636020 SETDB1Q15047 1291 aa16.39■□□□□ 0.21
CLN6-212ENST00000636020 KBTBD12Q3ZCT8 623 aa16.39■□□□□ 0.21
CLN6-212ENST00000636020 ZNF610Q8N9Z0 462 aa16.39■□□□□ 0.21
CLN6-212ENST00000636020 OR14L1PQ8NHC6 308 aa16.39■□□□□ 0.21
CLN6-212ENST00000636020 PLPPR2Q96GM1 343 aa16.39■□□□□ 0.21
CLN6-212ENST00000636020 ZNF845Q96IR2 970 aaPredicted RBP16.39■□□□□ 0.21
CLN6-212ENST00000636020 SERPINB12Q96P63 405 aa16.39■□□□□ 0.21
CLN6-212ENST00000636020 FAM167BQ9BTA0 163 aa16.39■□□□□ 0.21
CLN6-212ENST00000636020 KLHL4Q9C0H6 718 aa16.39■□□□□ 0.21
CLN6-212ENST00000636020 SERHLQ9NQF3 203 aa16.39■□□□□ 0.21
CLN6-212ENST00000636020 IARS2Q9NSE4 1012 aaKnown RBP16.39■□□□□ 0.21
CLN6-212ENST00000636020 PTBP2Q9UKA9 531 aaKnown RBP16.39■□□□□ 0.21
CLN6-212ENST00000636020 ZNF490Q9ULM2 529 aaPredicted RBP16.39■□□□□ 0.21
CLN6-212ENST00000636020 RTCAO00442 366 aaKnown RBP16.38■□□□□ 0.21
CLN6-212ENST00000636020 EMC8O43402 210 aa16.38■□□□□ 0.21
CLN6-212ENST00000636020 SCELO95171 688 aa16.38■□□□□ 0.21
CLN6-212ENST00000636020 IGHV4-39P01824 125 aa16.38■□□□□ 0.21
CLN6-212ENST00000636020 SOD3P08294 240 aa16.38■□□□□ 0.21
CLN6-212ENST00000636020 CD8BP10966 210 aa16.38■□□□□ 0.21
CLN6-212ENST00000636020 ZNF708P17019 499 aa16.38■□□□□ 0.21
CLN6-212ENST00000636020 GDF5P43026 501 aa16.38■□□□□ 0.21
CLN6-212ENST00000636020 TERF1P54274 439 aa16.38■□□□□ 0.21
CLN6-212ENST00000636020 SIRPAP78324 504 aa16.38■□□□□ 0.21
CLN6-212ENST00000636020 PDAP1Q13442 181 aaKnown RBP16.38■□□□□ 0.21
CLN6-212ENST00000636020 ANKRD22Q5VYY1 191 aa16.38■□□□□ 0.21
CLN6-212ENST00000636020 GSTA5Q7RTV2 222 aa16.38■□□□□ 0.21
CLN6-212ENST00000636020 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.38■□□□□ 0.21
CLN6-212ENST00000636020 SRFBP1Q8NEF9 429 aaKnown RBP16.38■□□□□ 0.21
CLN6-212ENST00000636020 ANKRD7Q92527 254 aa16.38■□□□□ 0.21
CLN6-212ENST00000636020 REPS1Q96D71 796 aa16.38■□□□□ 0.21
CLN6-212ENST00000636020 PDLIM5Q96HC4 596 aaKnown RBP16.38■□□□□ 0.21
CLN6-212ENST00000636020 RPF2Q9H7B2 306 aaKnown RBP16.38■□□□□ 0.21
CLN6-212ENST00000636020 METTL7AQ9H8H3 244 aa16.38■□□□□ 0.21
CLN6-212ENST00000636020 ACTR8Q9H981 624 aa16.38■□□□□ 0.21
CLN6-212ENST00000636020 EXO1Q9UQ84 846 aaKnown RBP16.38■□□□□ 0.21
CLN6-212ENST00000636020 ALPK2Q86TB3 2170 aa16.38■□□□□ 0.21
CLN6-212ENST00000636020 YLPM1P49750 1951 aaKnown RBP16.38■□□□□ 0.21
CLN6-212ENST00000636020 EXPH5Q8NEV8 1989 aa16.38■□□□□ 0.21
CLN6-212ENST00000636020 A0A096LNT2 108 aa16.37■□□□□ 0.21
CLN6-212ENST00000636020 C2orf72A6NCS6 295 aa16.37■□□□□ 0.21
CLN6-212ENST00000636020 PRAMEF4O60810 478 aa16.37■□□□□ 0.21
CLN6-212ENST00000636020 CBR3O75828 277 aa16.37■□□□□ 0.21
CLN6-212ENST00000636020 WDR47O94967 919 aa16.37■□□□□ 0.21
CLN6-212ENST00000636020 DANCRP0C864 163 aa16.37■□□□□ 0.21
CLN6-212ENST00000636020 PPP3CBP16298 524 aa16.37■□□□□ 0.21
CLN6-212ENST00000636020 HIST1H1TP22492 207 aaPredicted RBP16.37■□□□□ 0.21
CLN6-212ENST00000636020 CDKN1AP38936 164 aa16.37■□□□□ 0.21
CLN6-212ENST00000636020 PTGDSP41222 190 aa16.37■□□□□ 0.21
CLN6-212ENST00000636020 TMEM249Q2WGJ8 235 aa16.37■□□□□ 0.21
CLN6-212ENST00000636020 C18orf21Q32NC0 220 aaPredicted RBP16.37■□□□□ 0.21
CLN6-212ENST00000636020 PRAMEF9Q5VWM5 478 aa16.37■□□□□ 0.21
CLN6-212ENST00000636020 ADAM5Q6NVV9 412 aa16.37■□□□□ 0.21
CLN6-212ENST00000636020 TMEM81Q6P7N7 255 aa16.37■□□□□ 0.21
CLN6-212ENST00000636020 IFNEQ86WN2 208 aa16.37■□□□□ 0.21
CLN6-212ENST00000636020 AGGF1Q8N302 714 aaeCLIP16.37■□□□□ 0.21
CLN6-212ENST00000636020 RDH11Q8TC12 318 aa16.37■□□□□ 0.21
CLN6-212ENST00000636020 TANKQ92844 425 aa16.37■□□□□ 0.21
CLN6-212ENST00000636020 RIT1Q92963 219 aa16.37■□□□□ 0.21
CLN6-212ENST00000636020 GTPBP3Q969Y2 492 aaKnown RBP16.37■□□□□ 0.21
CLN6-212ENST00000636020 PELOQ9BRX2 385 aaKnown RBP16.37■□□□□ 0.21
CLN6-212ENST00000636020 SHARPINQ9H0F6 387 aa16.37■□□□□ 0.21
CLN6-212ENST00000636020 FREM1Q5H8C1 2179 aa16.36■□□□□ 0.21
CLN6-212ENST00000636020 SLC22A20A6NK97 555 aa16.36■□□□□ 0.21
CLN6-212ENST00000636020 ICOSLGO75144 302 aa16.36■□□□□ 0.21
CLN6-212ENST00000636020 NDUFS7O75251 213 aa16.36■□□□□ 0.21
CLN6-212ENST00000636020 ABCB1P08183 1280 aaPredicted RBP16.36■□□□□ 0.21
CLN6-212ENST00000636020 RHOXF2BP0C7M4 288 aa16.36■□□□□ 0.21
CLN6-212ENST00000636020 MLNP12872 115 aa16.36■□□□□ 0.21
CLN6-212ENST00000636020 SSTR4P31391 388 aa16.36■□□□□ 0.21
CLN6-212ENST00000636020 KCNJ1P48048 391 aa16.36■□□□□ 0.21
CLN6-212ENST00000636020 NRG3P56975 720 aa16.36■□□□□ 0.21
CLN6-212ENST00000636020 CDKL1Q00532 357 aa16.36■□□□□ 0.21
CLN6-212ENST00000636020 SLC30A6Q6NXT4 461 aa16.36■□□□□ 0.21
CLN6-212ENST00000636020 AAGABQ6PD74 315 aa16.36■□□□□ 0.21
CLN6-212ENST00000636020 PRR22Q8IZ63 422 aa16.36■□□□□ 0.21
CLN6-212ENST00000636020 WDSUB1Q8N9V3 476 aa16.36■□□□□ 0.21
CLN6-212ENST00000636020 LILRB1Q8NHL6 650 aaPredicted RBP16.36■□□□□ 0.21
CLN6-212ENST00000636020 ADIPOR1Q96A54 375 aa16.36■□□□□ 0.21
CLN6-212ENST00000636020 VPS39Q96JC1 886 aa16.36■□□□□ 0.21
CLN6-212ENST00000636020 EHD1Q9H4M9 534 aa16.36■□□□□ 0.21
CLN6-212ENST00000636020 TAS2R10Q9NYW0 307 aa16.36■□□□□ 0.21
CLN6-212ENST00000636020 LIPT1Q9Y234 373 aa16.36■□□□□ 0.21
CLN6-212ENST00000636020 TGP01266 2768 aa16.36■□□□□ 0.21
CLN6-212ENST00000636020 OR10H2O60403 315 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms