RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 NPIPB8E9PQR5 432 aa11.75□□□□□ -0.53
SYNGAP1-207ENST00000628646 CHST10O43529 356 aa11.75□□□□□ -0.53
SYNGAP1-207ENST00000628646 CTSVO60911 334 aa11.75□□□□□ -0.53
SYNGAP1-207ENST00000628646 CCL4P13236 92 aa11.75□□□□□ -0.53
SYNGAP1-207ENST00000628646 TCN2P20062 427 aa11.75□□□□□ -0.53
SYNGAP1-207ENST00000628646 EMP2P54851 167 aa11.75□□□□□ -0.53
SYNGAP1-207ENST00000628646 DCDP81605 110 aaKnown RBP11.75□□□□□ -0.53
SYNGAP1-207ENST00000628646 ZNF155Q12901 538 aaPredicted RBP11.75□□□□□ -0.53
SYNGAP1-207ENST00000628646 SERINC2Q96SA4 455 aa11.75□□□□□ -0.53
SYNGAP1-207ENST00000628646 OSBPL10Q9BXB5 764 aa11.75□□□□□ -0.53
SYNGAP1-207ENST00000628646 BRF2Q9HAW0 419 aa11.75□□□□□ -0.53
SYNGAP1-207ENST00000628646 THSD1Q9NS62 852 aa11.75□□□□□ -0.53
SYNGAP1-207ENST00000628646 TUBA8Q9NY65 449 aaPredicted RBP11.75□□□□□ -0.53
SYNGAP1-207ENST00000628646 TMCC3Q9ULS5 477 aa11.75□□□□□ -0.53
SYNGAP1-207ENST00000628646 ERVK-11Q9UQG0 969 aa11.75□□□□□ -0.53
SYNGAP1-207ENST00000628646 ANGPT4Q9Y264 503 aa11.75□□□□□ -0.53
SYNGAP1-207ENST00000628646 MAGED1Q9Y5V3 778 aaPredicted RBP11.75□□□□□ -0.53
SYNGAP1-207ENST00000628646 ZNF267Q14586 743 aaPredicted RBP11.75□□□□□ -0.53
SYNGAP1-207ENST00000628646 C16orf72Q14CZ0 275 aa11.75□□□□□ -0.53
SYNGAP1-207ENST00000628646 NDUFAF5Q5TEU4 345 aa11.75□□□□□ -0.53
SYNGAP1-207ENST00000628646 B3GNT8Q7Z7M8 397 aa11.75□□□□□ -0.53
SYNGAP1-207ENST00000628646 FAM181AQ8N9Y4 354 aa11.75□□□□□ -0.53
SYNGAP1-207ENST00000628646 ABHD11Q8NFV4 315 aa11.75□□□□□ -0.53
SYNGAP1-207ENST00000628646 TEX12Q9BXU0 123 aa11.75□□□□□ -0.53
SYNGAP1-207ENST00000628646 MS4A8Q9BY19 250 aa11.75□□□□□ -0.53
SYNGAP1-207ENST00000628646 PAIP1Q9H074 479 aaKnown RBP11.75□□□□□ -0.53
SYNGAP1-207ENST00000628646 GPN2Q9H9Y4 310 aaPredicted RBP11.75□□□□□ -0.53
SYNGAP1-207ENST00000628646 PARD6AQ9NPB6 346 aa11.75□□□□□ -0.53
SYNGAP1-207ENST00000628646 SUV39H1O43463 412 aa11.75□□□□□ -0.53
SYNGAP1-207ENST00000628646 PRPH2P23942 346 aa11.75□□□□□ -0.53
SYNGAP1-207ENST00000628646 NUP107P57740 925 aa11.75□□□□□ -0.53
SYNGAP1-207ENST00000628646 PAQR7Q86WK9 346 aa11.75□□□□□ -0.53
SYNGAP1-207ENST00000628646 ZCCHC3Q9NUD5 404 aaKnown RBP11.75□□□□□ -0.53
SYNGAP1-207ENST00000628646 LRRK1Q38SD2 2015 aa11.75□□□□□ -0.53
SYNGAP1-207ENST00000628646 KIAA1549LQ6ZVL6 1849 aa11.75□□□□□ -0.53
SYNGAP1-207ENST00000628646 IGHV5-10-1A0A0J9YXX1 117 aa11.74□□□□□ -0.53
SYNGAP1-207ENST00000628646 CLIC1O00299 241 aa11.74□□□□□ -0.53
SYNGAP1-207ENST00000628646 ALPLP05186 524 aa11.74□□□□□ -0.53
SYNGAP1-207ENST00000628646 RRM2P31350 389 aa11.74□□□□□ -0.53
SYNGAP1-207ENST00000628646 CDK9P50750 372 aaKnown RBP11.74□□□□□ -0.53
SYNGAP1-207ENST00000628646 EMP3P54852 163 aa11.74□□□□□ -0.53
SYNGAP1-207ENST00000628646 CASP9P55211 416 aa11.74□□□□□ -0.53
SYNGAP1-207ENST00000628646 RAB15P59190 212 aa11.74□□□□□ -0.53
SYNGAP1-207ENST00000628646 TRA2AQ13595 282 aaKnown RBP eCLIP11.74□□□□□ -0.53
SYNGAP1-207ENST00000628646 RUNDC3AQ59EK9 446 aa11.74□□□□□ -0.53
SYNGAP1-207ENST00000628646 GPR155Q7Z3F1 870 aa11.74□□□□□ -0.53
SYNGAP1-207ENST00000628646 ZSCAN1Q8NBB4 408 aa11.74□□□□□ -0.53
SYNGAP1-207ENST00000628646 GALNT6Q8NCL4 622 aa11.74□□□□□ -0.53
SYNGAP1-207ENST00000628646 KLHL31Q9H511 634 aa11.74□□□□□ -0.53
SYNGAP1-207ENST00000628646 WDR87Q6ZQQ6 2873 aa11.74□□□□□ -0.53
SYNGAP1-207ENST00000628646 A0A1W2PQM1 296 aa11.74□□□□□ -0.53
SYNGAP1-207ENST00000628646 A6NCN8 305 aa11.74□□□□□ -0.53
SYNGAP1-207ENST00000628646 POLR2IP36954 125 aaKnown RBP11.74□□□□□ -0.53
SYNGAP1-207ENST00000628646 FOLR3P41439 243 aa11.74□□□□□ -0.53
SYNGAP1-207ENST00000628646 MYBPC3Q14896 1274 aa11.74□□□□□ -0.53
SYNGAP1-207ENST00000628646 GTDC1Q4AE62 458 aa11.74□□□□□ -0.53
SYNGAP1-207ENST00000628646 WDR74Q6RFH5 385 aaPredicted RBP11.74□□□□□ -0.53
SYNGAP1-207ENST00000628646 C16orf62Q7Z3J2 963 aa11.74□□□□□ -0.53
SYNGAP1-207ENST00000628646 ADAMTS15Q8TE58 950 aa11.74□□□□□ -0.53
SYNGAP1-207ENST00000628646 XAGE5Q8WWM1 108 aa11.74□□□□□ -0.53
SYNGAP1-207ENST00000628646 NPLQ9BXD5 320 aaPredicted RBP11.74□□□□□ -0.53
SYNGAP1-207ENST00000628646 OCIAD1Q9NX40 245 aa11.74□□□□□ -0.53
SYNGAP1-207ENST00000628646 TPRKBQ9Y3C4 175 aa11.74□□□□□ -0.53
SYNGAP1-207ENST00000628646 HEMK1Q9Y5R4 338 aaPredicted RBP11.74□□□□□ -0.53
SYNGAP1-207ENST00000628646 XIRP2A4UGR9 3374 aa11.74□□□□□ -0.53
SYNGAP1-207ENST00000628646 PDE9AO76083 593 aa11.74□□□□□ -0.53
SYNGAP1-207ENST00000628646 THRBP10828 461 aa11.74□□□□□ -0.53
SYNGAP1-207ENST00000628646 CAPGP40121 348 aa11.74□□□□□ -0.53
SYNGAP1-207ENST00000628646 NKAIN1Q4KMZ8 207 aa11.74□□□□□ -0.53
SYNGAP1-207ENST00000628646 LRIF1Q5T3J3 769 aa11.74□□□□□ -0.53
SYNGAP1-207ENST00000628646 LAIR2Q6ISS4 152 aa11.74□□□□□ -0.53
SYNGAP1-207ENST00000628646 ENPP6Q6UWR7 440 aa11.74□□□□□ -0.53
SYNGAP1-207ENST00000628646 RRM2BQ7LG56 351 aa11.74□□□□□ -0.53
SYNGAP1-207ENST00000628646 OR51Q1Q8NH59 317 aa11.74□□□□□ -0.53
SYNGAP1-207ENST00000628646 THAP3Q8WTV1 239 aaPredicted RBP11.74□□□□□ -0.53
SYNGAP1-207ENST00000628646 OTUB1Q96FW1 271 aaPredicted RBP11.74□□□□□ -0.53
SYNGAP1-207ENST00000628646 TPD52L3Q96J77 140 aa11.74□□□□□ -0.53
SYNGAP1-207ENST00000628646 FCRL1Q96LA6 429 aa11.74□□□□□ -0.53
SYNGAP1-207ENST00000628646 DOK1Q99704 481 aa11.74□□□□□ -0.53
SYNGAP1-207ENST00000628646 REEP4Q9H6H4 257 aa11.74□□□□□ -0.53
SYNGAP1-207ENST00000628646 PPT2Q9UMR5 302 aa11.74□□□□□ -0.53
SYNGAP1-207ENST00000628646 A0A1B0GX78 115 aa11.74□□□□□ -0.53
SYNGAP1-207ENST00000628646 C1orf226A1L170 272 aa11.74□□□□□ -0.53
SYNGAP1-207ENST00000628646 LDB3O75112 727 aa11.74□□□□□ -0.53
SYNGAP1-207ENST00000628646 NBL1P41271 181 aa11.74□□□□□ -0.53
SYNGAP1-207ENST00000628646 OC90Q02509 493 aaPredicted RBP11.74□□□□□ -0.53
SYNGAP1-207ENST00000628646 FBXO42Q6P3S6 717 aa11.74□□□□□ -0.53
SYNGAP1-207ENST00000628646 LRRC69Q6ZNQ3 347 aa11.74□□□□□ -0.53
SYNGAP1-207ENST00000628646 PATL1Q86TB9 770 aaKnown RBP11.74□□□□□ -0.53
SYNGAP1-207ENST00000628646 SLC30A8Q8IWU4 369 aa11.74□□□□□ -0.53
SYNGAP1-207ENST00000628646 OR5T3Q8NGG3 340 aa11.74□□□□□ -0.53
SYNGAP1-207ENST00000628646 C16orf78Q8WTQ4 265 aa11.74□□□□□ -0.53
SYNGAP1-207ENST00000628646 TBC1D20Q96BZ9 403 aa11.74□□□□□ -0.53
SYNGAP1-207ENST00000628646 RDH12Q96NR8 316 aa11.74□□□□□ -0.53
SYNGAP1-207ENST00000628646 SPATA9Q9BWV2 254 aa11.74□□□□□ -0.53
SYNGAP1-207ENST00000628646 KAT8Q9H7Z6 458 aaKnown RBP11.74□□□□□ -0.53
SYNGAP1-207ENST00000628646 WBP11Q9Y2W2 641 aaKnown RBP11.74□□□□□ -0.53
SYNGAP1-207ENST00000628646 MAP4K5Q9Y4K4 846 aa11.74□□□□□ -0.53
SYNGAP1-207ENST00000628646 OR2A25A4D2G3 310 aa11.73□□□□□ -0.53
SYNGAP1-207ENST00000628646 SEMA3DO95025 777 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms