RNA–Protein interactions for RNA: ENST00000625883.1

CDR1-202, Transcript of cerebellar degeneration related protein 1, humanhuman

BASIC

Gene CDR1, Length 1,485 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1-202ENST00000625883 BCLAF3A2AJT9 711 aaKnown RBP3.31□□□□□ -1.88
CDR1-202ENST00000625883 PI15O43692 258 aa3.31□□□□□ -1.88
CDR1-202ENST00000625883 B3GALNT1O75752 331 aa3.31□□□□□ -1.88
CDR1-202ENST00000625883 SEMA4FO95754 770 aa3.31□□□□□ -1.88
CDR1-202ENST00000625883 OAS1P00973 400 aaKnown RBP3.31□□□□□ -1.88
CDR1-202ENST00000625883 IGHG3P01860 377 aa3.31□□□□□ -1.88
CDR1-202ENST00000625883 DNAJB1P25685 340 aa3.31□□□□□ -1.88
CDR1-202ENST00000625883 LMO2P25791 158 aa3.31□□□□□ -1.88
CDR1-202ENST00000625883 TMOD1P28289 359 aa3.31□□□□□ -1.88
CDR1-202ENST00000625883 MAGEA4P43358 317 aa3.31□□□□□ -1.88
CDR1-202ENST00000625883 ASMTP46597 345 aa3.31□□□□□ -1.88
CDR1-202ENST00000625883 GPC3P51654 580 aa3.31□□□□□ -1.88
CDR1-202ENST00000625883 SGSHP51688 502 aa3.31□□□□□ -1.88
CDR1-202ENST00000625883 GMFBP60983 142 aa3.31□□□□□ -1.88
CDR1-202ENST00000625883 GABPB1Q06547 395 aaPredicted RBP3.31□□□□□ -1.88
CDR1-202ENST00000625883 SPP2Q13103 211 aa3.31□□□□□ -1.88
CDR1-202ENST00000625883 NME3Q13232 169 aa3.31□□□□□ -1.88
CDR1-202ENST00000625883 SNX1Q13596 522 aa3.31□□□□□ -1.88
CDR1-202ENST00000625883 BTG3Q14201 252 aaPredicted RBP3.31□□□□□ -1.88
CDR1-202ENST00000625883 EMC2Q15006 297 aa3.31□□□□□ -1.88
CDR1-202ENST00000625883 ZNF699Q32M78 642 aa3.31□□□□□ -1.88
CDR1-202ENST00000625883 SNAI3Q3KNW1 292 aa3.31□□□□□ -1.88
CDR1-202ENST00000625883 LDLRAP1Q5SW96 308 aa3.31□□□□□ -1.88
CDR1-202ENST00000625883 RAET1GQ6H3X3 334 aa3.31□□□□□ -1.88
CDR1-202ENST00000625883 IRGCQ6NXR0 463 aa3.31□□□□□ -1.88
CDR1-202ENST00000625883 PAQR6Q6TCH4 344 aa3.31□□□□□ -1.88
CDR1-202ENST00000625883 CWC27Q6UX04 472 aaKnown RBP3.31□□□□□ -1.88
CDR1-202ENST00000625883 DPY19L2P2Q6ZN68 376 aa3.31□□□□□ -1.88
CDR1-202ENST00000625883 SYVN1Q86TM6 617 aa3.31□□□□□ -1.88
CDR1-202ENST00000625883 ABHD12Q8N2K0 398 aa3.31□□□□□ -1.88
CDR1-202ENST00000625883 ZNF491Q8N8L2 437 aa3.31□□□□□ -1.88
CDR1-202ENST00000625883 MAPK1IP1LQ8NDC0 245 aa3.31□□□□□ -1.88
CDR1-202ENST00000625883 U2AF1L4Q8WU68 220 aaKnown RBP3.31□□□□□ -1.88
CDR1-202ENST00000625883 CCDC51Q96ER9 411 aa3.31□□□□□ -1.88
CDR1-202ENST00000625883 ANKRD27Q96NW4 1050 aa3.31□□□□□ -1.88
CDR1-202ENST00000625883 HSD17B14Q9BPX1 270 aa3.31□□□□□ -1.88
CDR1-202ENST00000625883 ST6GALNAC5Q9BVH7 336 aa3.31□□□□□ -1.88
CDR1-202ENST00000625883 NMNAT2Q9BZQ4 307 aa3.31□□□□□ -1.88
CDR1-202ENST00000625883 TRIM15Q9C019 465 aa3.31□□□□□ -1.88
CDR1-202ENST00000625883 RAB17Q9H0T7 212 aa3.31□□□□□ -1.88
CDR1-202ENST00000625883 FAM124BQ9H5Z6 455 aaPredicted RBP3.31□□□□□ -1.88
CDR1-202ENST00000625883 NRN1Q9NPD7 142 aa3.31□□□□□ -1.88
CDR1-202ENST00000625883 EIF3KQ9UBQ5 218 aaKnown RBP3.31□□□□□ -1.88
CDR1-202ENST00000625883 MTF2Q9Y483 593 aaPredicted RBP3.31□□□□□ -1.88
CDR1-202ENST00000625883 AFF2P51816 1311 aa3.31□□□□□ -1.88
CDR1-202ENST00000625883 IGKV3D-15A0A087WSY6 115 aa3.3□□□□□ -1.88
CDR1-202ENST00000625883 IGHV3-16A0A0C4DH30 117 aa3.3□□□□□ -1.88
CDR1-202ENST00000625883 E9PQ18 207 aa3.3□□□□□ -1.88
CDR1-202ENST00000625883 TXNL1O43396 289 aa3.3□□□□□ -1.88
CDR1-202ENST00000625883 RALAP11233 206 aa3.3□□□□□ -1.88
CDR1-202ENST00000625883 IL4RP24394 825 aa3.3□□□□□ -1.88
CDR1-202ENST00000625883 SLC1A4P43007 532 aa3.3□□□□□ -1.88
CDR1-202ENST00000625883 NUMBP49757 651 aa3.3□□□□□ -1.88
CDR1-202ENST00000625883 RIDAP52758 137 aaKnown RBP3.3□□□□□ -1.88
CDR1-202ENST00000625883 HTD2P86397 168 aa3.3□□□□□ -1.88
CDR1-202ENST00000625883 NAAAQ02083 359 aa3.3□□□□□ -1.88
CDR1-202ENST00000625883 LRIT3Q3SXY7 679 aa3.3□□□□□ -1.88
CDR1-202ENST00000625883 C9orf66Q5T8R8 295 aa3.3□□□□□ -1.88
CDR1-202ENST00000625883 GPRIN3Q6ZVF9 776 aa3.3□□□□□ -1.88
CDR1-202ENST00000625883 SAMD12Q8N8I0 201 aa3.3□□□□□ -1.88
CDR1-202ENST00000625883 MLKLQ8NB16 471 aa3.3□□□□□ -1.88
CDR1-202ENST00000625883 FAM71CQ8NEG0 241 aa3.3□□□□□ -1.88
CDR1-202ENST00000625883 NTNG2Q96CW9 530 aa3.3□□□□□ -1.88
CDR1-202ENST00000625883 NDUFAF3Q9BU61 184 aa3.3□□□□□ -1.88
CDR1-202ENST00000625883 JPT2Q9H910 190 aa3.3□□□□□ -1.88
CDR1-202ENST00000625883 ROPN1Q9HAT0 212 aaPredicted RBP3.3□□□□□ -1.88
CDR1-202ENST00000625883 IL1RL2Q9HB29 575 aa3.3□□□□□ -1.88
CDR1-202ENST00000625883 HPF1Q9NWY4 346 aa3.3□□□□□ -1.88
CDR1-202ENST00000625883 TAS2R16Q9NYV7 291 aa3.3□□□□□ -1.88
CDR1-202ENST00000625883 TAS2R3Q9NYW6 316 aa3.3□□□□□ -1.88
CDR1-202ENST00000625883 AUP1Q9Y679 476 aa3.3□□□□□ -1.88
CDR1-202ENST00000625883 PRSS21Q9Y6M0 314 aa3.3□□□□□ -1.88
CDR1-202ENST00000625883 TEX48A0A1B0GUV7 120 aa3.29□□□□□ -1.88
CDR1-202ENST00000625883 RGSL1A5PLK6 1076 aa3.29□□□□□ -1.88
CDR1-202ENST00000625883 RPL37AP8A6NKH3 93 aa3.29□□□□□ -1.88
CDR1-202ENST00000625883 RNF212BA8MTL3 300 aa3.29□□□□□ -1.88
CDR1-202ENST00000625883 BUB1O43683 1085 aa3.29□□□□□ -1.88
CDR1-202ENST00000625883 STK17BO94768 372 aa3.29□□□□□ -1.88
CDR1-202ENST00000625883 TRIM16O95361 564 aa3.29□□□□□ -1.88
CDR1-202ENST00000625883 GP9P14770 177 aa3.29□□□□□ -1.88
CDR1-202ENST00000625883 ARF4P18085 180 aaPredicted RBP3.29□□□□□ -1.88
CDR1-202ENST00000625883 UCP1P25874 307 aa3.29□□□□□ -1.88
CDR1-202ENST00000625883 MATKP42679 507 aa3.29□□□□□ -1.88
CDR1-202ENST00000625883 ACY1Q03154 408 aa3.29□□□□□ -1.88
CDR1-202ENST00000625883 PCK2Q16822 640 aa3.29□□□□□ -1.88
CDR1-202ENST00000625883 ACSF3Q4G176 576 aaPredicted RBP3.29□□□□□ -1.88
CDR1-202ENST00000625883 FAM182AQ5T1J6 154 aa3.29□□□□□ -1.88
CDR1-202ENST00000625883 AGAP7PQ5VUJ5 663 aa3.29□□□□□ -1.88
CDR1-202ENST00000625883 METTL7BQ6UX53 244 aa3.29□□□□□ -1.88
CDR1-202ENST00000625883 UNC5DQ6UXZ4 953 aa3.29□□□□□ -1.88
CDR1-202ENST00000625883 MOB2Q70IA6 237 aa3.29□□□□□ -1.88
CDR1-202ENST00000625883 CATSPER3Q86XQ3 398 aa3.29□□□□□ -1.88
CDR1-202ENST00000625883 PYROXD2Q8N2H3 581 aa3.29□□□□□ -1.88
CDR1-202ENST00000625883 ANKRD20A12PQ8NF67 263 aa3.29□□□□□ -1.88
CDR1-202ENST00000625883 CPXM1Q96SM3 734 aa3.29□□□□□ -1.88
CDR1-202ENST00000625883 RAB11FIP5Q9BXF6 653 aa3.29□□□□□ -1.88
CDR1-202ENST00000625883 CCSER1Q9C0I3 900 aa3.29□□□□□ -1.88
CDR1-202ENST00000625883 NACA2Q9H009 215 aa3.29□□□□□ -1.88
CDR1-202ENST00000625883 GNB4Q9HAV0 340 aa3.29□□□□□ -1.88
CDR1-202ENST00000625883 GTSE1Q9NYZ3 720 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms