RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 IRAK3Q9Y616 596 aa10.64□□□□□ -0.71
VARS2-213ENST00000625423 NOTCH4Q99466 2003 aa10.64□□□□□ -0.71
VARS2-213ENST00000625423 ANTXRLA6NF34 631 aa10.64□□□□□ -0.71
VARS2-213ENST00000625423 GLOD5A6NK44 160 aa10.64□□□□□ -0.71
VARS2-213ENST00000625423 PCCBP05166 539 aa10.64□□□□□ -0.71
VARS2-213ENST00000625423 EPHX1P07099 455 aa10.64□□□□□ -0.71
VARS2-213ENST00000625423 ETV5P41161 510 aa10.64□□□□□ -0.71
VARS2-213ENST00000625423 ETV1P50549 477 aa10.64□□□□□ -0.71
VARS2-213ENST00000625423 PSPHP78330 225 aa10.64□□□□□ -0.71
VARS2-213ENST00000625423 IFITM2Q01629 132 aa10.64□□□□□ -0.71
VARS2-213ENST00000625423 CCDC92Q53HC0 331 aaPredicted RBP10.64□□□□□ -0.71
VARS2-213ENST00000625423 SYT14P1Q58G82 188 aa10.64□□□□□ -0.71
VARS2-213ENST00000625423 ERN2Q76MJ5 926 aaKnown RBP10.64□□□□□ -0.71
VARS2-213ENST00000625423 FAM26EQ8N5C1 309 aa10.64□□□□□ -0.71
VARS2-213ENST00000625423 OR9Q1Q8NGQ5 310 aa10.64□□□□□ -0.71
VARS2-213ENST00000625423 CHAC2Q8WUX2 184 aa10.64□□□□□ -0.71
VARS2-213ENST00000625423 TRIM43Q96BQ3 446 aaPredicted RBP10.64□□□□□ -0.71
VARS2-213ENST00000625423 TMCO6Q96DC7 493 aa10.64□□□□□ -0.71
VARS2-213ENST00000625423 RSPRY1Q96DX4 576 aa10.64□□□□□ -0.71
VARS2-213ENST00000625423 C17orf62Q9BQA9 187 aa10.64□□□□□ -0.71
VARS2-213ENST00000625423 DPH7Q9BTV6 452 aa10.64□□□□□ -0.71
VARS2-213ENST00000625423 MENTQ9BUN1 341 aa10.64□□□□□ -0.71
VARS2-213ENST00000625423 RACGAP1Q9H0H5 632 aa10.64□□□□□ -0.71
VARS2-213ENST00000625423 MARCH7Q9H992 704 aa10.64□□□□□ -0.71
VARS2-213ENST00000625423 TIGARQ9NQ88 270 aa10.64□□□□□ -0.71
VARS2-213ENST00000625423 ZCCHC3Q9NUD5 404 aaKnown RBP10.64□□□□□ -0.71
VARS2-213ENST00000625423 EDDM13A0A1B0GTR0 161 aa10.63□□□□□ -0.71
VARS2-213ENST00000625423 A0A1W2PPV9 198 aa10.63□□□□□ -0.71
VARS2-213ENST00000625423 A0A1W2PRQ8 180 aa10.63□□□□□ -0.71
VARS2-213ENST00000625423 EPPINO95925 133 aa10.63□□□□□ -0.71
VARS2-213ENST00000625423 ALPPL2P10696 532 aa10.63□□□□□ -0.71
VARS2-213ENST00000625423 VIPR2P41587 438 aa10.63□□□□□ -0.71
VARS2-213ENST00000625423 GIPRP48546 466 aa10.63□□□□□ -0.71
VARS2-213ENST00000625423 LBX1P52954 281 aa10.63□□□□□ -0.71
VARS2-213ENST00000625423 RPA4Q13156 261 aa10.63□□□□□ -0.71
VARS2-213ENST00000625423 ELAVL3Q14576 367 aaKnown RBP10.63□□□□□ -0.71
VARS2-213ENST00000625423 ARHGAP19Q14CB8 494 aa10.63□□□□□ -0.71
VARS2-213ENST00000625423 ATAT1Q5SQI0 421 aa10.63□□□□□ -0.71
VARS2-213ENST00000625423 OR6T1Q8NGN1 323 aa10.63□□□□□ -0.71
VARS2-213ENST00000625423 POLDIP3Q9BY77 421 aaKnown RBP10.63□□□□□ -0.71
VARS2-213ENST00000625423 MAN2C1Q9NTJ4 1040 aa10.63□□□□□ -0.71
VARS2-213ENST00000625423 ACSS1Q9NUB1 689 aaPredicted RBP10.63□□□□□ -0.71
VARS2-213ENST00000625423 SLC27A6Q9Y2P4 619 aa10.63□□□□□ -0.71
VARS2-213ENST00000625423 OTOL1A6NHN0 477 aaPredicted RBP10.63□□□□□ -0.71
VARS2-213ENST00000625423 EFCAB14O75071 495 aa10.63□□□□□ -0.71
VARS2-213ENST00000625423 ADH1CP00326 375 aa10.63□□□□□ -0.71
VARS2-213ENST00000625423 EIF2S1P05198 315 aaKnown RBP10.63□□□□□ -0.71
VARS2-213ENST00000625423 CLEC2LP0C7M8 214 aa10.63□□□□□ -0.71
VARS2-213ENST00000625423 PPP2R1BP30154 601 aa10.63□□□□□ -0.71
VARS2-213ENST00000625423 HTR3AP46098 478 aa10.63□□□□□ -0.71
VARS2-213ENST00000625423 LARS2Q15031 903 aaKnown RBP10.63□□□□□ -0.71
VARS2-213ENST00000625423 GPR19Q15760 415 aa10.63□□□□□ -0.71
VARS2-213ENST00000625423 TMEM52BQ4KMG9 183 aa10.63□□□□□ -0.71
VARS2-213ENST00000625423 FLYWCH1Q4VC44 716 aa10.63□□□□□ -0.71
VARS2-213ENST00000625423 ARMC4Q5T2S8 1044 aa10.63□□□□□ -0.71
VARS2-213ENST00000625423 NDUFAF5Q5TEU4 345 aa10.63□□□□□ -0.71
VARS2-213ENST00000625423 OR4C11Q6IEV9 310 aa10.63□□□□□ -0.71
VARS2-213ENST00000625423 LINC01555Q8NAE3 123 aa10.63□□□□□ -0.71
VARS2-213ENST00000625423 TP53I13Q8NBR0 393 aaPredicted RBP10.63□□□□□ -0.71
VARS2-213ENST00000625423 COX14Q96I36 57 aa10.63□□□□□ -0.71
VARS2-213ENST00000625423 ZNF582Q96NG8 517 aaPredicted RBP10.63□□□□□ -0.71
VARS2-213ENST00000625423 AMDHD1Q96NU7 426 aa10.63□□□□□ -0.71
VARS2-213ENST00000625423 MACROD1Q9BQ69 325 aa10.63□□□□□ -0.71
VARS2-213ENST00000625423 TXNL4BQ9NX01 149 aaKnown RBP10.63□□□□□ -0.71
VARS2-213ENST00000625423 DIMT1Q9UNQ2 313 aaKnown RBP10.63□□□□□ -0.71
VARS2-213ENST00000625423 HOXC11O43248 304 aaPredicted RBP10.63□□□□□ -0.71
VARS2-213ENST00000625423 LRRTM2O43300 516 aa10.63□□□□□ -0.71
VARS2-213ENST00000625423 RAB36O95755 333 aa10.63□□□□□ -0.71
VARS2-213ENST00000625423 TIMP1P01033 207 aa10.63□□□□□ -0.71
VARS2-213ENST00000625423 KRT8P05787 483 aa10.63□□□□□ -0.71
VARS2-213ENST00000625423 DDX5P17844 614 aaKnown RBP10.63□□□□□ -0.71
VARS2-213ENST00000625423 BUD31P41223 144 aaPredicted RBP10.63□□□□□ -0.71
VARS2-213ENST00000625423 SSR2P43308 183 aa10.63□□□□□ -0.71
VARS2-213ENST00000625423 GJA8P48165 433 aa10.63□□□□□ -0.71
VARS2-213ENST00000625423 RFX2P48378 723 aa10.63□□□□□ -0.71
VARS2-213ENST00000625423 NCBP2P52298 156 aaKnown RBP eCLIP10.63□□□□□ -0.719e-10■□□□□ 10.4
VARS2-213ENST00000625423 ALDH6A1Q02252 535 aaKnown RBP10.63□□□□□ -0.71
VARS2-213ENST00000625423 TAB1Q15750 504 aa10.63□□□□□ -0.71
VARS2-213ENST00000625423 SNAPC1Q16533 368 aa10.63□□□□□ -0.71
VARS2-213ENST00000625423 FAM46CQ5VWP2 391 aa10.63□□□□□ -0.71
VARS2-213ENST00000625423 RNLSQ5VYX0 342 aa10.63□□□□□ -0.71
VARS2-213ENST00000625423 C22orf42Q6IC83 251 aa10.63□□□□□ -0.71
VARS2-213ENST00000625423 C11orf74Q86VG3 221 aa10.63□□□□□ -0.71
VARS2-213ENST00000625423 LRRTM4Q86VH4 590 aa10.63□□□□□ -0.71
VARS2-213ENST00000625423 CACUL1Q86Y37 369 aa10.63□□□□□ -0.71
VARS2-213ENST00000625423 UBQLNLQ8IYU4 475 aa10.63□□□□□ -0.71
VARS2-213ENST00000625423 POF1BQ8WVV4 589 aa10.63□□□□□ -0.71
VARS2-213ENST00000625423 NELL2Q99435 816 aa10.63□□□□□ -0.71
VARS2-213ENST00000625423 PRR14Q9BWN1 585 aa10.63□□□□□ -0.71
VARS2-213ENST00000625423 TP63Q9H3D4 680 aaPredicted RBP10.63□□□□□ -0.71
VARS2-213ENST00000625423 MOV10Q9HCE1 1003 aaKnown RBP10.63□□□□□ -0.71
VARS2-213ENST00000625423 FBXW2Q9UKT8 454 aa10.63□□□□□ -0.71
VARS2-213ENST00000625423 YARS2Q9Y2Z4 477 aaKnown RBP10.63□□□□□ -0.71
VARS2-213ENST00000625423 CMAHPQ9Y471 501 aa10.63□□□□□ -0.71
VARS2-213ENST00000625423 SPIN1Q9Y657 262 aaPredicted RBP10.63□□□□□ -0.71
VARS2-213ENST00000625423 KIAA1549LQ6ZVL6 1849 aa10.63□□□□□ -0.71
VARS2-213ENST00000625423 SMIM30A4D0T7 59 aa10.62□□□□□ -0.71
VARS2-213ENST00000625423 CACNB4O00305 520 aaPredicted RBP10.62□□□□□ -0.71
VARS2-213ENST00000625423 CHRM4P08173 479 aa10.62□□□□□ -0.71
VARS2-213ENST00000625423 P2RY2P41231 377 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms