RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 GBF1Q92538 1859 aa7.13□□□□□ -1.27
TRIM49B-202ENST00000622138 SCN10AQ9Y5Y9 1956 aa7.13□□□□□ -1.27
TRIM49B-202ENST00000622138 A0A0U1RQF3 1178 aa7.13□□□□□ -1.27
TRIM49B-202ENST00000622138 MYO1GB0I1T2 1018 aa7.13□□□□□ -1.27
TRIM49B-202ENST00000622138 G3V3Q6 166 aa7.13□□□□□ -1.27
TRIM49B-202ENST00000622138 L7N2F9 121 aa7.13□□□□□ -1.27
TRIM49B-202ENST00000622138 M0QZ92 97 aa7.13□□□□□ -1.27
TRIM49B-202ENST00000622138 GTPBP1O00178 669 aaKnown RBP7.13□□□□□ -1.27
TRIM49B-202ENST00000622138 GPR37O15354 613 aa7.13□□□□□ -1.27
TRIM49B-202ENST00000622138 TPST2O60704 377 aa7.13□□□□□ -1.27
TRIM49B-202ENST00000622138 KERAO60938 352 aa7.13□□□□□ -1.27
TRIM49B-202ENST00000622138 CRCPO75575 148 aa7.13□□□□□ -1.27
TRIM49B-202ENST00000622138 RPP40O75818 363 aaKnown RBP7.13□□□□□ -1.27
TRIM49B-202ENST00000622138 GADD45GO95257 159 aa7.13□□□□□ -1.27
TRIM49B-202ENST00000622138 GLP2RO95838 553 aa7.13□□□□□ -1.27
TRIM49B-202ENST00000622138 FABP3P05413 133 aa7.13□□□□□ -1.27
TRIM49B-202ENST00000622138 CD63P08962 238 aa7.13□□□□□ -1.27
TRIM49B-202ENST00000622138 FOLR2P14207 255 aa7.13□□□□□ -1.27
TRIM49B-202ENST00000622138 CXCL3P19876 107 aa7.13□□□□□ -1.27
TRIM49B-202ENST00000622138 STC1P52823 247 aa7.13□□□□□ -1.27
TRIM49B-202ENST00000622138 VSX2P58304 361 aaPredicted RBP7.13□□□□□ -1.27
TRIM49B-202ENST00000622138 BPIFB3P59826 476 aa7.13□□□□□ -1.27
TRIM49B-202ENST00000622138 RAB5BP61020 215 aa7.13□□□□□ -1.27
TRIM49B-202ENST00000622138 NR6A1Q15406 480 aa7.13□□□□□ -1.27
TRIM49B-202ENST00000622138 TMEM44Q2T9K0 475 aa7.13□□□□□ -1.27
TRIM49B-202ENST00000622138 CDNFQ49AH0 187 aa7.13□□□□□ -1.27
TRIM49B-202ENST00000622138 OR2B11Q5JQS5 317 aa7.13□□□□□ -1.27
TRIM49B-202ENST00000622138 CXCL17Q6UXB2 119 aa7.13□□□□□ -1.27
TRIM49B-202ENST00000622138 ZNF730Q6ZMV8 503 aa7.13□□□□□ -1.27
TRIM49B-202ENST00000622138 BTN2A1Q7KYR7 527 aa7.13□□□□□ -1.27
TRIM49B-202ENST00000622138 SSX9Q7RTT3 188 aa7.13□□□□□ -1.27
TRIM49B-202ENST00000622138 CALHM3Q86XJ0 350 aa7.13□□□□□ -1.27
TRIM49B-202ENST00000622138 SLC44A2Q8IWA5 706 aaPredicted RBP7.13□□□□□ -1.27
TRIM49B-202ENST00000622138 FBXO39Q8N4B4 442 aa7.13□□□□□ -1.27
TRIM49B-202ENST00000622138 GPR150Q8NGU9 434 aa7.13□□□□□ -1.27
TRIM49B-202ENST00000622138 MOSPD2Q8NHP6 518 aa7.13□□□□□ -1.27
TRIM49B-202ENST00000622138 DNAJB8Q8NHS0 232 aa7.13□□□□□ -1.27
TRIM49B-202ENST00000622138 COQ8AQ8NI60 647 aa7.13□□□□□ -1.27
TRIM49B-202ENST00000622138 ASZ1Q8WWH4 475 aa7.13□□□□□ -1.27
TRIM49B-202ENST00000622138 TCEAL4Q96EI5 215 aa7.13□□□□□ -1.27
TRIM49B-202ENST00000622138 EPYCQ99645 322 aa7.13□□□□□ -1.27
TRIM49B-202ENST00000622138 POLR1EQ9GZS1 481 aaKnown RBP7.13□□□□□ -1.27
TRIM49B-202ENST00000622138 SAP130Q9H0E3 1048 aa7.13□□□□□ -1.27
TRIM49B-202ENST00000622138 TFB2MQ9H5Q4 396 aaKnown RBP7.13□□□□□ -1.27
TRIM49B-202ENST00000622138 REEP1Q9H902 201 aa7.13□□□□□ -1.27
TRIM49B-202ENST00000622138 RAD18Q9NS91 495 aa7.13□□□□□ -1.27
TRIM49B-202ENST00000622138 C1orf109Q9NX04 203 aa7.13□□□□□ -1.27
TRIM49B-202ENST00000622138 TREM2Q9NZC2 230 aa7.13□□□□□ -1.27
TRIM49B-202ENST00000622138 LSM2Q9Y333 95 aaKnown RBP7.13□□□□□ -1.27
TRIM49B-202ENST00000622138 ZNF451Q9Y4E5 1061 aa7.13□□□□□ -1.27
TRIM49B-202ENST00000622138 PCDHB7Q9Y5E2 793 aa7.13□□□□□ -1.27
TRIM49B-202ENST00000622138 IGLV3-10A0A075B6K4 115 aa7.12□□□□□ -1.27
TRIM49B-202ENST00000622138 CHURC1-FNTBB4DL54 471 aa7.12□□□□□ -1.27
TRIM49B-202ENST00000622138 STMND1H3BQB6 276 aa7.12□□□□□ -1.27
TRIM49B-202ENST00000622138 MPZL2O60487 215 aa7.12□□□□□ -1.27
TRIM49B-202ENST00000622138 ATG12O94817 140 aa7.12□□□□□ -1.27
TRIM49B-202ENST00000622138 KDM4BO94953 1096 aa7.12□□□□□ -1.27
TRIM49B-202ENST00000622138 ADH1CP00326 375 aa7.12□□□□□ -1.27
TRIM49B-202ENST00000622138 VIPP01282 170 aa7.12□□□□□ -1.27
TRIM49B-202ENST00000622138 SEMG1P04279 462 aa7.12□□□□□ -1.27
TRIM49B-202ENST00000622138 PRG2P13727 222 aa7.12□□□□□ -1.27
TRIM49B-202ENST00000622138 TYRP14679 529 aa7.12□□□□□ -1.27
TRIM49B-202ENST00000622138 UGT2B7P16662 529 aa7.12□□□□□ -1.27
TRIM49B-202ENST00000622138 ENGP17813 658 aa7.12□□□□□ -1.27
TRIM49B-202ENST00000622138 FPR3P25089 353 aa7.12□□□□□ -1.27
TRIM49B-202ENST00000622138 PBX3P40426 434 aa7.12□□□□□ -1.27
TRIM49B-202ENST00000622138 ASMTP46597 345 aa7.12□□□□□ -1.27
TRIM49B-202ENST00000622138 RGRP47804 291 aa7.12□□□□□ -1.27
TRIM49B-202ENST00000622138 KCNJ3P48549 501 aa7.12□□□□□ -1.27
TRIM49B-202ENST00000622138 ZNF140P52738 457 aaPredicted RBP7.12□□□□□ -1.27
TRIM49B-202ENST00000622138 NUDT6P53370 316 aa7.12□□□□□ -1.27
TRIM49B-202ENST00000622138 FOXK2Q01167 660 aa7.12□□□□□ -1.27
TRIM49B-202ENST00000622138 MLLT11Q13015 90 aaPredicted RBP7.12□□□□□ -1.27
TRIM49B-202ENST00000622138 TUSC3Q13454 348 aa7.12□□□□□ -1.27
TRIM49B-202ENST00000622138 SERINC3Q13530 473 aa7.12□□□□□ -1.27
TRIM49B-202ENST00000622138 SERTAD2Q14140 314 aa7.12□□□□□ -1.27
TRIM49B-202ENST00000622138 C18orf21Q32NC0 220 aaPredicted RBP7.12□□□□□ -1.27
TRIM49B-202ENST00000622138 FAM171A1Q5VUB5 890 aa7.12□□□□□ -1.27
TRIM49B-202ENST00000622138 PLAG1Q6DJT9 500 aa7.12□□□□□ -1.27
TRIM49B-202ENST00000622138 MAMDC2Q7Z304 686 aaPredicted RBP7.12□□□□□ -1.27
TRIM49B-202ENST00000622138 SVBPQ8N300 66 aa7.12□□□□□ -1.27
TRIM49B-202ENST00000622138 DNAJC5GQ8N7S2 189 aa7.12□□□□□ -1.27
TRIM49B-202ENST00000622138 B3GNT7Q8NFL0 401 aa7.12□□□□□ -1.27
TRIM49B-202ENST00000622138 OR2T35Q8NGX2 323 aa7.12□□□□□ -1.27
TRIM49B-202ENST00000622138 RHEBL1Q8TAI7 183 aa7.12□□□□□ -1.27
TRIM49B-202ENST00000622138 SUSD3Q96L08 255 aa7.12□□□□□ -1.27
TRIM49B-202ENST00000622138 TRIB3Q96RU7 358 aa7.12□□□□□ -1.27
TRIM49B-202ENST00000622138 PFDN5Q99471 154 aa7.12□□□□□ -1.27
TRIM49B-202ENST00000622138 CMSS1Q9BQ75 279 aaKnown RBP7.12□□□□□ -1.27
TRIM49B-202ENST00000622138 ZCCHC2Q9C0B9 1178 aaKnown RBP7.12□□□□□ -1.27
TRIM49B-202ENST00000622138 TWSG1Q9GZX9 223 aa7.12□□□□□ -1.27
TRIM49B-202ENST00000622138 STARD7Q9NQZ5 370 aa7.12□□□□□ -1.27
TRIM49B-202ENST00000622138 ZNF226Q9NYT6 803 aa7.12□□□□□ -1.27
TRIM49B-202ENST00000622138 VAPAQ9P0L0 249 aa7.12□□□□□ -1.27
TRIM49B-202ENST00000622138 EIF2B4Q9UI10 523 aaKnown RBP7.12□□□□□ -1.27
TRIM49B-202ENST00000622138 PCTPQ9UKL6 214 aa7.12□□□□□ -1.27
TRIM49B-202ENST00000622138 PADI3Q9ULW8 664 aa7.12□□□□□ -1.27
TRIM49B-202ENST00000622138 CFAP20Q9Y6A4 193 aaKnown RBP7.12□□□□□ -1.27
TRIM49B-202ENST00000622138 TEX13CA0A0J9YWL9 993 aa7.12□□□□□ -1.27
TRIM49B-202ENST00000622138 GFRA2O00451 464 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms