RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 ENTPD4Q9Y227 616 aa13.28□□□□□ -0.28
CBWD3-217ENST00000621474 EIF3LQ9Y262 564 aaKnown RBP13.28□□□□□ -0.28
CBWD3-217ENST00000621474 TCP11X1B4DZS4 312 aa13.28□□□□□ -0.28
CBWD3-217ENST00000621474 ITGA10O75578 1167 aa13.28□□□□□ -0.28
CBWD3-217ENST00000621474 CLDN8P56748 225 aa13.28□□□□□ -0.28
CBWD3-217ENST00000621474 EXOSC7Q15024 291 aaKnown RBP13.28□□□□□ -0.28
CBWD3-217ENST00000621474 FHL5Q5TD97 284 aa13.28□□□□□ -0.28
CBWD3-217ENST00000621474 ABHD17BQ5VST6 288 aa13.28□□□□□ -0.28
CBWD3-217ENST00000621474 TMEM198Q66K66 360 aa13.28□□□□□ -0.28
CBWD3-217ENST00000621474 SLC6A19Q695T7 634 aa13.28□□□□□ -0.28
CBWD3-217ENST00000621474 ZNF227Q86WZ6 799 aa13.28□□□□□ -0.28
CBWD3-217ENST00000621474 HPS6Q86YV9 775 aa13.28□□□□□ -0.28
CBWD3-217ENST00000621474 CATSPER1Q8NEC5 780 aa13.28□□□□□ -0.28
CBWD3-217ENST00000621474 OR7G2Q8NG99 324 aa13.28□□□□□ -0.28
CBWD3-217ENST00000621474 NUBPLQ8TB37 319 aa13.28□□□□□ -0.28
CBWD3-217ENST00000621474 ACTRT2Q8TDY3 377 aa13.28□□□□□ -0.28
CBWD3-217ENST00000621474 PPCDCQ96CD2 204 aa13.28□□□□□ -0.28
CBWD3-217ENST00000621474 TEX37Q96LM6 180 aa13.28□□□□□ -0.28
CBWD3-217ENST00000621474 OR10A5Q9H207 317 aa13.28□□□□□ -0.28
CBWD3-217ENST00000621474 EPS8L2Q9H6S3 715 aa13.28□□□□□ -0.28
CBWD3-217ENST00000621474 AIG1Q9NVV5 245 aa13.28□□□□□ -0.28
CBWD3-217ENST00000621474 ANKRD10Q9NXR5 420 aa13.28□□□□□ -0.28
CBWD3-217ENST00000621474 TEKT2Q9UIF3 430 aa13.28□□□□□ -0.28
CBWD3-217ENST00000621474 DYRK3O43781 588 aa13.27□□□□□ -0.29
CBWD3-217ENST00000621474 DPM1O60762 260 aa13.27□□□□□ -0.29
CBWD3-217ENST00000621474 ZFAND5O76080 213 aa13.27□□□□□ -0.29
CBWD3-217ENST00000621474 LAMP1P11279 417 aa13.27□□□□□ -0.29
CBWD3-217ENST00000621474 MPIP34949 423 aa13.27□□□□□ -0.29
CBWD3-217ENST00000621474 NCBP2P52298 156 aaKnown RBP eCLIP13.27□□□□□ -0.29
CBWD3-217ENST00000621474 LSM12Q3MHD2 195 aaKnown RBP13.27□□□□□ -0.29
CBWD3-217ENST00000621474 RNF111Q6ZNA4 994 aa13.27□□□□□ -0.29
CBWD3-217ENST00000621474 CAMKMTQ7Z624 323 aa13.27□□□□□ -0.29
CBWD3-217ENST00000621474 ZNF441Q8N8Z8 693 aa13.27□□□□□ -0.29
CBWD3-217ENST00000621474 C16orf52Q8NHV5 167 aa13.27□□□□□ -0.29
CBWD3-217ENST00000621474 KAT2AQ92830 837 aa13.27□□□□□ -0.29
CBWD3-217ENST00000621474 COQ8BQ96D53 544 aa13.27□□□□□ -0.29
CBWD3-217ENST00000621474 SIGLEC12Q96PQ1 595 aa13.27□□□□□ -0.29
CBWD3-217ENST00000621474 MFRPQ9BY79 579 aa13.27□□□□□ -0.29
CBWD3-217ENST00000621474 CCDC134Q9H6E4 229 aa13.27□□□□□ -0.29
CBWD3-217ENST00000621474 GIMAP4Q9NUV9 329 aa13.27□□□□□ -0.29
CBWD3-217ENST00000621474 SH3BP4Q9P0V3 963 aa13.27□□□□□ -0.29
CBWD3-217ENST00000621474 GPR45Q9Y5Y3 372 aa13.27□□□□□ -0.29
CBWD3-217ENST00000621474 OR5H15A6NDH6 313 aa13.26□□□□□ -0.29
CBWD3-217ENST00000621474 WWP2O00308 870 aa13.26□□□□□ -0.29
CBWD3-217ENST00000621474 PDPK1O15530 556 aa13.26□□□□□ -0.29
CBWD3-217ENST00000621474 DIAPH2O60879 1101 aa13.26□□□□□ -0.29
CBWD3-217ENST00000621474 NME6O75414 186 aaPredicted RBP13.26□□□□□ -0.29
CBWD3-217ENST00000621474 OR2J2O76002 312 aa13.26□□□□□ -0.29
CBWD3-217ENST00000621474 SORBS2O94875 1100 aaKnown RBP13.26□□□□□ -0.29
CBWD3-217ENST00000621474 TGDSO95455 350 aa13.26□□□□□ -0.29
CBWD3-217ENST00000621474 PRPS1L1P21108 318 aa13.26□□□□□ -0.29
CBWD3-217ENST00000621474 IDH3AP50213 366 aa13.26□□□□□ -0.29
CBWD3-217ENST00000621474 EMDP50402 254 aa13.26□□□□□ -0.29
CBWD3-217ENST00000621474 TNFSF10P50591 281 aa13.26□□□□□ -0.29
CBWD3-217ENST00000621474 AQP5P55064 265 aa13.26□□□□□ -0.29
CBWD3-217ENST00000621474 KLRB1Q12918 225 aa13.26□□□□□ -0.29
CBWD3-217ENST00000621474 TUBA3CQ13748 450 aa13.26□□□□□ -0.29
CBWD3-217ENST00000621474 PLEKHN1Q494U1 663 aaPredicted RBP13.26□□□□□ -0.29
CBWD3-217ENST00000621474 CGB2Q6NT52 195 aa13.26□□□□□ -0.29
CBWD3-217ENST00000621474 TUBA3EQ6PEY2 450 aa13.26□□□□□ -0.29
CBWD3-217ENST00000621474 ZNF551Q7Z340 670 aaPredicted RBP13.26□□□□□ -0.29
CBWD3-217ENST00000621474 R3HCC1LQ7Z5L2 792 aaKnown RBP13.26□□□□□ -0.29
CBWD3-217ENST00000621474 FAM9CQ8IZT9 166 aa13.26□□□□□ -0.29
CBWD3-217ENST00000621474 ZADH2Q8N4Q0 377 aa13.26□□□□□ -0.29
CBWD3-217ENST00000621474 CEP70Q8NHQ1 597 aa13.26□□□□□ -0.29
CBWD3-217ENST00000621474 TM9SF4Q92544 642 aa13.26□□□□□ -0.29
CBWD3-217ENST00000621474 ADIPOR1Q96A54 375 aa13.26□□□□□ -0.29
CBWD3-217ENST00000621474 MARK4Q96L34 752 aa13.26□□□□□ -0.29
CBWD3-217ENST00000621474 BBS4Q96RK4 519 aa13.26□□□□□ -0.29
CBWD3-217ENST00000621474 RASL10BQ96S79 203 aa13.26□□□□□ -0.29
CBWD3-217ENST00000621474 WWTR1Q9GZV5 400 aa13.26□□□□□ -0.29
CBWD3-217ENST00000621474 TRIM45Q9H8W5 580 aaPredicted RBP13.26□□□□□ -0.29
CBWD3-217ENST00000621474 ERVK-11Q9UQG0 969 aa13.26□□□□□ -0.29
CBWD3-217ENST00000621474 B3GNT3Q9Y2A9 372 aa13.26□□□□□ -0.29
CBWD3-217ENST00000621474 OR6C76A6NM76 312 aa13.25□□□□□ -0.29
CBWD3-217ENST00000621474 PLOD2O00469 737 aa13.25□□□□□ -0.29
CBWD3-217ENST00000621474 PLOD3O60568 738 aa13.25□□□□□ -0.29
CBWD3-217ENST00000621474 NEURL1O76050 574 aa13.25□□□□□ -0.29
CBWD3-217ENST00000621474 PSMG1O95456 288 aa13.25□□□□□ -0.29
CBWD3-217ENST00000621474 NADKO95544 446 aaPredicted RBP13.25□□□□□ -0.29
CBWD3-217ENST00000621474 EFNA1P20827 205 aaPredicted RBP13.25□□□□□ -0.29
CBWD3-217ENST00000621474 GPX3P22352 226 aa13.25□□□□□ -0.29
CBWD3-217ENST00000621474 IL12AP29459 219 aa13.25□□□□□ -0.29
CBWD3-217ENST00000621474 NTSP30990 170 aa13.25□□□□□ -0.29
CBWD3-217ENST00000621474 TRHRP34981 398 aaPredicted RBP13.25□□□□□ -0.29
CBWD3-217ENST00000621474 HPCAL1P37235 193 aa13.25□□□□□ -0.29
CBWD3-217ENST00000621474 CD96P40200 585 aa13.25□□□□□ -0.29
CBWD3-217ENST00000621474 MDH1P40925 334 aaKnown RBP13.25□□□□□ -0.29
CBWD3-217ENST00000621474 MC3RP41968 323 aa13.25□□□□□ -0.29
CBWD3-217ENST00000621474 PHC1P78364 1004 aa13.25□□□□□ -0.29
CBWD3-217ENST00000621474 ARG2P78540 354 aa13.25□□□□□ -0.29
CBWD3-217ENST00000621474 TMEM107Q6UX40 140 aa13.25□□□□□ -0.29
CBWD3-217ENST00000621474 LYPD8Q6UX82 237 aa13.25□□□□□ -0.29
CBWD3-217ENST00000621474 SPATA19Q7Z5L4 167 aa13.25□□□□□ -0.29
CBWD3-217ENST00000621474 MDS2Q8NDY4 140 aa13.25□□□□□ -0.29
CBWD3-217ENST00000621474 OR7G1Q8NGA0 311 aa13.25□□□□□ -0.29
CBWD3-217ENST00000621474 OR52R1Q8NGF1 315 aa13.25□□□□□ -0.29
CBWD3-217ENST00000621474 PNPLA2Q96AD5 504 aa13.25□□□□□ -0.29
CBWD3-217ENST00000621474 THOC1Q96FV9 657 aaKnown RBP13.25□□□□□ -0.29
CBWD3-217ENST00000621474 CLMPQ9H6B4 373 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms