RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 PCSK2P16519 638 aa17.25■□□□□ 0.35
CIRBP-245ENST00000621399 S1PR1P21453 382 aa17.25■□□□□ 0.35
CIRBP-245ENST00000621399 NME5P56597 212 aa17.25■□□□□ 0.35
CIRBP-245ENST00000621399 MLF1P58340 268 aa17.25■□□□□ 0.35
CIRBP-245ENST00000621399 C21orf58P58505 322 aa17.25■□□□□ 0.35
CIRBP-245ENST00000621399 ARG2P78540 354 aa17.25■□□□□ 0.35
CIRBP-245ENST00000621399 RPS6KA2Q15349 733 aa17.25■□□□□ 0.35
CIRBP-245ENST00000621399 MPEG1Q2M385 716 aa17.25■□□□□ 0.35
CIRBP-245ENST00000621399 PGS1Q32NB8 556 aa17.25■□□□□ 0.35
CIRBP-245ENST00000621399 LSM12Q3MHD2 195 aaKnown RBP17.25■□□□□ 0.35
CIRBP-245ENST00000621399 SLC29A4Q7RTT9 530 aa17.25■□□□□ 0.35
CIRBP-245ENST00000621399 PTRH1Q86Y79 214 aaKnown RBP17.25■□□□□ 0.35
CIRBP-245ENST00000621399 C9orf40Q8IXQ3 194 aa17.25■□□□□ 0.35
CIRBP-245ENST00000621399 TEX19Q8NA77 164 aa17.25■□□□□ 0.35
CIRBP-245ENST00000621399 ZNF675Q8TD23 568 aa17.25■□□□□ 0.35
CIRBP-245ENST00000621399 CTHRC1Q96CG8 243 aa17.25■□□□□ 0.35
CIRBP-245ENST00000621399 EBF4Q9BQW3 602 aa17.25■□□□□ 0.35
CIRBP-245ENST00000621399 MFRPQ9BY79 579 aa17.25■□□□□ 0.35
CIRBP-245ENST00000621399 OR10A5Q9H207 317 aa17.25■□□□□ 0.35
CIRBP-245ENST00000621399 CCDC134Q9H6E4 229 aa17.25■□□□□ 0.35
CIRBP-245ENST00000621399 NPHS2Q9NP85 383 aa17.25■□□□□ 0.35
CIRBP-245ENST00000621399 SLAMF7Q9NQ25 335 aa17.25■□□□□ 0.35
CIRBP-245ENST00000621399 TCF7L2Q9NQB0 619 aa17.25■□□□□ 0.35
CIRBP-245ENST00000621399 ZNF639Q9UID6 485 aa17.25■□□□□ 0.35
CIRBP-245ENST00000621399 BOD1L1Q8NFC6 3051 aa17.24■□□□□ 0.35
CIRBP-245ENST00000621399 TMEM200CA6NKL6 621 aa17.24■□□□□ 0.35
CIRBP-245ENST00000621399 OR6C76A6NM76 312 aa17.24■□□□□ 0.35
CIRBP-245ENST00000621399 WWP2O00308 870 aa17.24■□□□□ 0.35
CIRBP-245ENST00000621399 UBDO15205 165 aa17.24■□□□□ 0.35
CIRBP-245ENST00000621399 CLPSP04118 112 aa17.24■□□□□ 0.35
CIRBP-245ENST00000621399 IDO1P14902 403 aa17.24■□□□□ 0.35
CIRBP-245ENST00000621399 CD97P48960 835 aa17.24■□□□□ 0.35
CIRBP-245ENST00000621399 ST13P50502 369 aaKnown RBP17.24■□□□□ 0.35
CIRBP-245ENST00000621399 MANFP55145 182 aaKnown RBP17.24■□□□□ 0.35
CIRBP-245ENST00000621399 NFATC3Q12968 1075 aa17.24■□□□□ 0.35
CIRBP-245ENST00000621399 EXOSC7Q15024 291 aaKnown RBP17.24■□□□□ 0.35
CIRBP-245ENST00000621399 TMEM198Q66K66 360 aa17.24■□□□□ 0.35
CIRBP-245ENST00000621399 C16orf47Q6ZP98 133 aaPredicted RBP17.24■□□□□ 0.35
CIRBP-245ENST00000621399 ZNF551Q7Z340 670 aaPredicted RBP17.24■□□□□ 0.35
CIRBP-245ENST00000621399 ARMC10Q8N2F6 343 aa17.24■□□□□ 0.35
CIRBP-245ENST00000621399 NATD1Q8N6N6 113 aa17.24■□□□□ 0.35
CIRBP-245ENST00000621399 RBMXL3Q8N7X1 1067 aaKnown RBP17.24■□□□□ 0.35
CIRBP-245ENST00000621399 ZNF615Q8N8J6 731 aa17.24■□□□□ 0.35
CIRBP-245ENST00000621399 OR52R1Q8NGF1 315 aa17.24■□□□□ 0.35
CIRBP-245ENST00000621399 ZFP28Q8NHY6 868 aa17.24■□□□□ 0.35
CIRBP-245ENST00000621399 HAS2Q92819 552 aa17.24■□□□□ 0.35
CIRBP-245ENST00000621399 COQ8BQ96D53 544 aa17.24■□□□□ 0.35
CIRBP-245ENST00000621399 ERP27Q96DN0 273 aa17.24■□□□□ 0.35
CIRBP-245ENST00000621399 ZBED6CLQ96FA7 236 aaPredicted RBP17.24■□□□□ 0.35
CIRBP-245ENST00000621399 MARK4Q96L34 752 aa17.24■□□□□ 0.35
CIRBP-245ENST00000621399 GAL3ST4Q96RP7 486 aa17.24■□□□□ 0.35
CIRBP-245ENST00000621399 ACSS1Q9NUB1 689 aaPredicted RBP17.24■□□□□ 0.35
CIRBP-245ENST00000621399 MYOTQ9UBF9 498 aa17.24■□□□□ 0.35
CIRBP-245ENST00000621399 GPR45Q9Y5Y3 372 aa17.24■□□□□ 0.35
CIRBP-245ENST00000621399 ITGA10O75578 1167 aa17.23■□□□□ 0.35
CIRBP-245ENST00000621399 BCAS2O75934 225 aaPredicted RBP17.23■□□□□ 0.35
CIRBP-245ENST00000621399 OR2J2O76002 312 aa17.23■□□□□ 0.35
CIRBP-245ENST00000621399 SLITRK5O94991 958 aa17.23■□□□□ 0.35
CIRBP-245ENST00000621399 CBX7O95931 251 aa17.23■□□□□ 0.35
CIRBP-245ENST00000621399 EFNA1P20827 205 aaPredicted RBP17.23■□□□□ 0.35
CIRBP-245ENST00000621399 GPC1P35052 558 aa17.23■□□□□ 0.35
CIRBP-245ENST00000621399 SOX18P35713 384 aa17.23■□□□□ 0.35
CIRBP-245ENST00000621399 KLRB1Q12918 225 aa17.23■□□□□ 0.35
CIRBP-245ENST00000621399 HSPB3Q12988 150 aa17.23■□□□□ 0.35
CIRBP-245ENST00000621399 GSTA3Q16772 222 aa17.23■□□□□ 0.35
CIRBP-245ENST00000621399 HLA-DQA1Q5Y7H0 255 aa17.23■□□□□ 0.35
CIRBP-245ENST00000621399 TMEM107Q6UX40 140 aa17.23■□□□□ 0.35
CIRBP-245ENST00000621399 OR7G2Q8NG99 324 aa17.23■□□□□ 0.35
CIRBP-245ENST00000621399 RFWD2Q8NHY2 731 aa17.23■□□□□ 0.35
CIRBP-245ENST00000621399 NUBPLQ8TB37 319 aa17.23■□□□□ 0.35
CIRBP-245ENST00000621399 UTP23Q9BRU9 249 aaKnown RBP17.23■□□□□ 0.35
CIRBP-245ENST00000621399 SIKE1Q9BRV8 207 aa17.23■□□□□ 0.35
CIRBP-245ENST00000621399 CCDC28BQ9BUN5 200 aa17.23■□□□□ 0.35
CIRBP-245ENST00000621399 DUSP26Q9BV47 211 aa17.23■□□□□ 0.35
CIRBP-245ENST00000621399 BHLHE41Q9C0J9 482 aaPredicted RBP17.23■□□□□ 0.35
CIRBP-245ENST00000621399 WWTR1Q9GZV5 400 aa17.23■□□□□ 0.35
CIRBP-245ENST00000621399 RNF32Q9H0A6 362 aa17.23■□□□□ 0.35
CIRBP-245ENST00000621399 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.23■□□□□ 0.35
CIRBP-245ENST00000621399 FGFR1OP2Q9NVK5 253 aa17.23■□□□□ 0.35
CIRBP-245ENST00000621399 ANKRD10Q9NXR5 420 aa17.23■□□□□ 0.35
CIRBP-245ENST00000621399 DCTN4Q9UJW0 460 aa17.23■□□□□ 0.35
CIRBP-245ENST00000621399 CFL2Q9Y281 166 aa17.23■□□□□ 0.35
CIRBP-245ENST00000621399 YARS2Q9Y2Z4 477 aaKnown RBP17.23■□□□□ 0.35
CIRBP-245ENST00000621399 TLN1Q9Y490 2541 aaKnown RBP17.23■□□□□ 0.35
CIRBP-245ENST00000621399 C2orf92A0A1B0GVN3 265 aa17.22■□□□□ 0.35
CIRBP-245ENST00000621399 A0A1W2PRB8 838 aa17.22■□□□□ 0.35
CIRBP-245ENST00000621399 OR5H15A6NDH6 313 aa17.22■□□□□ 0.35
CIRBP-245ENST00000621399 E9PBE3 544 aa17.22■□□□□ 0.35
CIRBP-245ENST00000621399 ANKRD28O15084 1053 aa17.22■□□□□ 0.35
CIRBP-245ENST00000621399 KALRNO60229 2985 aa17.22■□□□□ 0.35
CIRBP-245ENST00000621399 PLOD3O60568 738 aa17.22■□□□□ 0.35
CIRBP-245ENST00000621399 PRAMEF2O60811 474 aa17.22■□□□□ 0.35
CIRBP-245ENST00000621399 TROVE2P10155 538 aaKnown RBP eCLIP17.22■□□□□ 0.35
CIRBP-245ENST00000621399 CASRP41180 1078 aa17.22■□□□□ 0.35
CIRBP-245ENST00000621399 MC3RP41968 323 aa17.22■□□□□ 0.35
CIRBP-245ENST00000621399 FRKP42685 505 aaPredicted RBP17.22■□□□□ 0.35
CIRBP-245ENST00000621399 SSR4P51571 173 aa17.22■□□□□ 0.35
CIRBP-245ENST00000621399 CLNS1AP54105 237 aaKnown RBP17.22■□□□□ 0.35
CIRBP-245ENST00000621399 UFM1P61960 85 aa17.22■□□□□ 0.35
CIRBP-245ENST00000621399 OC90Q02509 493 aaPredicted RBP17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms