RNA–Protein interactions for RNA: ENST00000620789.4

LITAF-220, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-220ENST00000620789 RASL10BQ96S79 203 aa16.95■□□□□ 0.3
LITAF-220ENST00000620789 WWTR1Q9GZV5 400 aa16.95■□□□□ 0.3
LITAF-220ENST00000620789 OR10A5Q9H207 317 aa16.95■□□□□ 0.3
LITAF-220ENST00000620789 MEAF6Q9HAF1 191 aa16.95■□□□□ 0.3
LITAF-220ENST00000620789 INTS9Q9NV88 658 aaKnown RBP16.95■□□□□ 0.3
LITAF-220ENST00000620789 ASIC5Q9NY37 505 aa16.95■□□□□ 0.3
LITAF-220ENST00000620789 LRFN1Q9P244 771 aa16.95■□□□□ 0.3
LITAF-220ENST00000620789 MARCOQ9UEW3 520 aaPredicted RBP16.95■□□□□ 0.3
LITAF-220ENST00000620789 ZNF639Q9UID6 485 aa16.95■□□□□ 0.3
LITAF-220ENST00000620789 EIF3LQ9Y262 564 aaKnown RBP16.95■□□□□ 0.3
LITAF-220ENST00000620789 CROCCQ5TZA2 2017 aa16.94■□□□□ 0.3
LITAF-220ENST00000620789 SLCO1B7G3V0H7 640 aa16.94■□□□□ 0.3
LITAF-220ENST00000620789 PRAMEF2O60811 474 aa16.94■□□□□ 0.3
LITAF-220ENST00000620789 VPS4BO75351 444 aa16.94■□□□□ 0.3
LITAF-220ENST00000620789 NEURL1O76050 574 aa16.94■□□□□ 0.3
LITAF-220ENST00000620789 KITP10721 976 aa16.94■□□□□ 0.3
LITAF-220ENST00000620789 NTSP30990 170 aa16.94■□□□□ 0.3
LITAF-220ENST00000620789 PDE7AQ13946 482 aa16.94■□□□□ 0.3
LITAF-220ENST00000620789 PTGR1Q14914 329 aa16.94■□□□□ 0.3
LITAF-220ENST00000620789 MPEG1Q2M385 716 aa16.94■□□□□ 0.3
LITAF-220ENST00000620789 TRMT12Q53H54 448 aaKnown RBP16.94■□□□□ 0.3
LITAF-220ENST00000620789 SPINK14Q6IE38 97 aa16.94■□□□□ 0.3
LITAF-220ENST00000620789 RPUSD3Q6P087 351 aaKnown RBP16.94■□□□□ 0.3
LITAF-220ENST00000620789 LRRC34Q8IZ02 419 aa16.94■□□□□ 0.3
LITAF-220ENST00000620789 FAM9CQ8IZT9 166 aa16.94■□□□□ 0.3
LITAF-220ENST00000620789 PPCDCQ96CD2 204 aa16.94■□□□□ 0.3
LITAF-220ENST00000620789 MTERF3Q96E29 417 aa16.94■□□□□ 0.3
LITAF-220ENST00000620789 GAL3ST4Q96RP7 486 aa16.94■□□□□ 0.3
LITAF-220ENST00000620789 NOP53Q9NZM5 478 aaKnown RBP16.94■□□□□ 0.3
LITAF-220ENST00000620789 TRPC5OSA6NMA1 111 aa16.93■□□□□ 0.3
LITAF-220ENST00000620789 CBX7O95931 251 aa16.93■□□□□ 0.3
LITAF-220ENST00000620789 PCSK2P16519 638 aa16.93■□□□□ 0.3
LITAF-220ENST00000620789 HPCAL1P37235 193 aa16.93■□□□□ 0.3
LITAF-220ENST00000620789 NCBP2P52298 156 aaKnown RBP eCLIP16.93■□□□□ 0.3
LITAF-220ENST00000620789 MRPS35P82673 323 aaKnown RBP16.93■□□□□ 0.3
LITAF-220ENST00000620789 EXOSC7Q15024 291 aaKnown RBP16.93■□□□□ 0.3
LITAF-220ENST00000620789 INPP5JQ15735 1006 aaPredicted RBP16.93■□□□□ 0.3
LITAF-220ENST00000620789 PRR30Q53SZ7 412 aaPredicted RBP16.93■□□□□ 0.3
LITAF-220ENST00000620789 PIGGQ5H8A4 983 aa16.93■□□□□ 0.3
LITAF-220ENST00000620789 ZNF766Q5HY98 468 aa16.93■□□□□ 0.3
LITAF-220ENST00000620789 ANKRD26P1Q6NSI1 321 aa16.93■□□□□ 0.3
LITAF-220ENST00000620789 R3HCC1LQ7Z5L2 792 aaKnown RBP16.93■□□□□ 0.3
LITAF-220ENST00000620789 ZNF227Q86WZ6 799 aa16.93■□□□□ 0.3
LITAF-220ENST00000620789 WDR75Q8IWA0 830 aaKnown RBP16.93■□□□□ 0.3
LITAF-220ENST00000620789 PIWIL2Q8TC59 973 aaKnown RBP16.93■□□□□ 0.3
LITAF-220ENST00000620789 CPT1CQ8TCG5 803 aa16.93■□□□□ 0.3
LITAF-220ENST00000620789 ASB15Q8WXK1 588 aa16.93■□□□□ 0.3
LITAF-220ENST00000620789 ERP27Q96DN0 273 aa16.93■□□□□ 0.3
LITAF-220ENST00000620789 C7orf26Q96N11 449 aa16.93■□□□□ 0.3
LITAF-220ENST00000620789 BCAP29Q9UHQ4 241 aa16.93■□□□□ 0.3
LITAF-220ENST00000620789 PCDHGB6Q9Y5F9 930 aa16.93■□□□□ 0.3
LITAF-220ENST00000620789 C2orf92A0A1B0GVN3 265 aa16.92■□□□□ 0.3
LITAF-220ENST00000620789 SDHDO14521 159 aa16.92■□□□□ 0.3
LITAF-220ENST00000620789 SCAMP2O15127 329 aaKnown RBP16.92■□□□□ 0.3
LITAF-220ENST00000620789 PDPK1O15530 556 aa16.92■□□□□ 0.3
LITAF-220ENST00000620789 SLITRK5O94991 958 aa16.92■□□□□ 0.3
LITAF-220ENST00000620789 G6PDP11413 515 aa16.92■□□□□ 0.3
LITAF-220ENST00000620789 PLA2G2AP14555 144 aa16.92■□□□□ 0.3
LITAF-220ENST00000620789 CD46P15529 392 aa16.92■□□□□ 0.3
LITAF-220ENST00000620789 LBPP18428 481 aa16.92■□□□□ 0.3
LITAF-220ENST00000620789 RPL3P39023 403 aaKnown RBP16.92■□□□□ 0.3
LITAF-220ENST00000620789 SOX3P41225 446 aa16.92■□□□□ 0.3
LITAF-220ENST00000620789 DUSP8Q13202 625 aa16.92■□□□□ 0.3
LITAF-220ENST00000620789 INAQ16352 499 aa16.92■□□□□ 0.3
LITAF-220ENST00000620789 ZNF385BQ569K4 471 aa16.92■□□□□ 0.3
LITAF-220ENST00000620789 LARP4Q71RC2 724 aaKnown RBP eCLIP16.92■□□□□ 0.3
LITAF-220ENST00000620789 GPALPP1Q8IXQ4 340 aa16.92■□□□□ 0.3
LITAF-220ENST00000620789 CYP4Z2PQ8N1L4 340 aa16.92■□□□□ 0.3
LITAF-220ENST00000620789 CISD2Q8N5K1 135 aaKnown RBP16.92■□□□□ 0.3
LITAF-220ENST00000620789 ZNF441Q8N8Z8 693 aa16.92■□□□□ 0.3
LITAF-220ENST00000620789 SIMC1Q8NDZ2 872 aa16.92■□□□□ 0.3
LITAF-220ENST00000620789 OR52R1Q8NGF1 315 aa16.92■□□□□ 0.3
LITAF-220ENST00000620789 C16orf52Q8NHV5 167 aa16.92■□□□□ 0.3
LITAF-220ENST00000620789 SLC22A8Q8TCC7 542 aa16.92■□□□□ 0.3
LITAF-220ENST00000620789 KAT2AQ92830 837 aa16.92■□□□□ 0.3
LITAF-220ENST00000620789 SNRNP40Q96DI7 357 aaKnown RBP16.92■□□□□ 0.3
LITAF-220ENST00000620789 SCMH1Q96GD3 660 aa16.92■□□□□ 0.3
LITAF-220ENST00000620789 C5orf34Q96MH7 638 aa16.92■□□□□ 0.3
LITAF-220ENST00000620789 AMDHD1Q96NU7 426 aa16.92■□□□□ 0.3
LITAF-220ENST00000620789 GLIPR2Q9H4G4 154 aa16.92■□□□□ 0.3
LITAF-220ENST00000620789 SH3BP4Q9P0V3 963 aa16.92■□□□□ 0.3
LITAF-220ENST00000620789 ATP6V1HQ9UI12 483 aa16.92■□□□□ 0.3
LITAF-220ENST00000620789 CFL2Q9Y281 166 aa16.92■□□□□ 0.3
LITAF-220ENST00000620789 A8MVJ9 347 aa16.91■□□□□ 0.3
LITAF-220ENST00000620789 PLOD3O60568 738 aa16.91■□□□□ 0.3
LITAF-220ENST00000620789 ZNF354AO60765 605 aaPredicted RBP16.91■□□□□ 0.3
LITAF-220ENST00000620789 SLC25A12O75746 678 aa16.91■□□□□ 0.3
LITAF-220ENST00000620789 BCAS2O75934 225 aaPredicted RBP16.91■□□□□ 0.3
LITAF-220ENST00000620789 OR6B1O95007 311 aa16.91■□□□□ 0.3
LITAF-220ENST00000620789 NADKO95544 446 aaPredicted RBP16.91■□□□□ 0.3
LITAF-220ENST00000620789 DDX5P17844 614 aaKnown RBP16.91■□□□□ 0.3
LITAF-220ENST00000620789 PRPS1L1P21108 318 aa16.91■□□□□ 0.3
LITAF-220ENST00000620789 GPX3P22352 226 aa16.91■□□□□ 0.3
LITAF-220ENST00000620789 DIO3P55073 304 aa16.91■□□□□ 0.3
LITAF-220ENST00000620789 HLA-DQA1Q5Y7H0 255 aa16.91■□□□□ 0.3
LITAF-220ENST00000620789 SLC25A25Q6KCM7 469 aa16.91■□□□□ 0.3
LITAF-220ENST00000620789 OGFOD2Q6N063 350 aa16.91■□□□□ 0.3
LITAF-220ENST00000620789 OPN5Q6U736 354 aa16.91■□□□□ 0.3
LITAF-220ENST00000620789 SLC15A4Q8N697 577 aa16.91■□□□□ 0.3
LITAF-220ENST00000620789 TMEM178AQ8NBL3 297 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms