RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 LRRC25Q8N386 305 aaPredicted RBP14.78□□□□□ -0.04
BRCA1-228ENST00000618469 VWA5B2Q8N398 1253 aa14.78□□□□□ -0.04
BRCA1-228ENST00000618469 C16orf78Q8WTQ4 265 aa14.78□□□□□ -0.04
BRCA1-228ENST00000618469 EXOSC8Q96B26 276 aaKnown RBP14.78□□□□□ -0.04
BRCA1-228ENST00000618469 C11orf24Q96F05 449 aaPredicted RBP14.78□□□□□ -0.04
BRCA1-228ENST00000618469 CNRIP1Q96F85 164 aaPredicted RBP14.78□□□□□ -0.04
BRCA1-228ENST00000618469 PSME2Q9UL46 239 aa14.78□□□□□ -0.04
BRCA1-228ENST00000618469 NPIPA1Q9UND3 350 aa14.78□□□□□ -0.04
BRCA1-228ENST00000618469 ENTPD4Q9Y227 616 aa14.78□□□□□ -0.04
BRCA1-228ENST00000618469 ZNF780BQ9Y6R6 833 aa14.78□□□□□ -0.04
BRCA1-228ENST00000618469 POLEQ07864 2286 aa14.78□□□□□ -0.04
BRCA1-228ENST00000618469 MYO7BQ6PIF6 2116 aa14.78□□□□□ -0.04
BRCA1-228ENST00000618469 TMEM233B4DJY2 109 aa14.77□□□□□ -0.05
BRCA1-228ENST00000618469 G3V3Y1 287 aa14.77□□□□□ -0.05
BRCA1-228ENST00000618469 KLRC4-KLRK1H3BQV0 150 aa14.77□□□□□ -0.05
BRCA1-228ENST00000618469 NADKO95544 446 aaPredicted RBP14.77□□□□□ -0.05
BRCA1-228ENST00000618469 CHEK2O96017 543 aa14.77□□□□□ -0.05
BRCA1-228ENST00000618469 ATP1B1P05026 303 aa14.77□□□□□ -0.05
BRCA1-228ENST00000618469 FUT7Q11130 342 aa14.77□□□□□ -0.05
BRCA1-228ENST00000618469 HEPACAMQ14CZ8 416 aa14.77□□□□□ -0.05
BRCA1-228ENST00000618469 LTB4RQ15722 352 aa14.77□□□□□ -0.05
BRCA1-228ENST00000618469 KANK2Q63ZY3 851 aa14.77□□□□□ -0.05
BRCA1-228ENST00000618469 POGLUT1Q8NBL1 392 aa14.77□□□□□ -0.05
BRCA1-228ENST00000618469 AGR3Q8TD06 166 aa14.77□□□□□ -0.05
BRCA1-228ENST00000618469 PKNOX2Q96KN3 472 aa14.77□□□□□ -0.05
BRCA1-228ENST00000618469 GPR137Q96N19 417 aa14.77□□□□□ -0.05
BRCA1-228ENST00000618469 OR10A5Q9H207 317 aa14.77□□□□□ -0.05
BRCA1-228ENST00000618469 GIMAP4Q9NUV9 329 aa14.77□□□□□ -0.05
BRCA1-228ENST00000618469 MAT2BQ9NZL9 334 aa14.77□□□□□ -0.05
BRCA1-228ENST00000618469 CELSR1Q9NYQ6 3014 aa14.77□□□□□ -0.05
BRCA1-228ENST00000618469 MED13LQ71F56 2210 aa14.76□□□□□ -0.05
BRCA1-228ENST00000618469 A0A0G2JMM0 328 aa14.76□□□□□ -0.05
BRCA1-228ENST00000618469 A0A1W2PPB8 328 aa14.76□□□□□ -0.05
BRCA1-228ENST00000618469 A0A1W2PRS3 328 aa14.76□□□□□ -0.05
BRCA1-228ENST00000618469 KIR3DP1A8MWS1 328 aa14.76□□□□□ -0.05
BRCA1-228ENST00000618469 SLC28A1O00337 649 aa14.76□□□□□ -0.05
BRCA1-228ENST00000618469 TFECO14948 347 aaPredicted RBP14.76□□□□□ -0.05
BRCA1-228ENST00000618469 RGS14O43566 566 aa14.76□□□□□ -0.05
BRCA1-228ENST00000618469 WISP2O76076 250 aa14.76□□□□□ -0.05
BRCA1-228ENST00000618469 BPGMP07738 259 aa14.76□□□□□ -0.05
BRCA1-228ENST00000618469 NEFHP12036 1026 aa14.76□□□□□ -0.05
BRCA1-228ENST00000618469 DRD2P14416 443 aa14.76□□□□□ -0.05
BRCA1-228ENST00000618469 ETV4P43268 484 aa14.76□□□□□ -0.05
BRCA1-228ENST00000618469 GSTM5P46439 218 aa14.76□□□□□ -0.05
BRCA1-228ENST00000618469 RBPJQ06330 500 aa14.76□□□□□ -0.05
BRCA1-228ENST00000618469 EXOSC7Q15024 291 aaKnown RBP14.76□□□□□ -0.05
BRCA1-228ENST00000618469 PRICKLE4Q2TBC4 344 aa14.76□□□□□ -0.05
BRCA1-228ENST00000618469 PIGGQ5H8A4 983 aa14.76□□□□□ -0.05
BRCA1-228ENST00000618469 ARL13AQ5H913 290 aaPredicted RBP14.76□□□□□ -0.05
BRCA1-228ENST00000618469 RNFT1Q5M7Z0 435 aa14.76□□□□□ -0.05
BRCA1-228ENST00000618469 SH2D4BQ5SQS7 431 aa14.76□□□□□ -0.05
BRCA1-228ENST00000618469 HLA-DQA1Q5Y7H0 255 aa14.76□□□□□ -0.05
BRCA1-228ENST00000618469 FAM111BQ6SJ93 734 aa14.76□□□□□ -0.05
BRCA1-228ENST00000618469 FJX1Q86VR8 437 aa14.76□□□□□ -0.05
BRCA1-228ENST00000618469 SIAH3Q8IW03 269 aa14.76□□□□□ -0.05
BRCA1-228ENST00000618469 DDIASQ8IXT1 998 aa14.76□□□□□ -0.05
BRCA1-228ENST00000618469 GOLM1Q8NBJ4 401 aa14.76□□□□□ -0.05
BRCA1-228ENST00000618469 ADCY4Q8NFM4 1077 aa14.76□□□□□ -0.05
BRCA1-228ENST00000618469 SPACA9Q96E40 222 aaPredicted RBP14.76□□□□□ -0.05
BRCA1-228ENST00000618469 MAGED4Q96JG8 741 aa14.76□□□□□ -0.05
BRCA1-228ENST00000618469 EML4Q9HC35 981 aaKnown RBP14.76□□□□□ -0.05
BRCA1-228ENST00000618469 DEPPQ9NTK1 212 aa14.76□□□□□ -0.05
BRCA1-228ENST00000618469 SIRT5Q9NXA8 310 aa14.76□□□□□ -0.05
BRCA1-228ENST00000618469 EXPH5Q8NEV8 1989 aa14.75□□□□□ -0.05
BRCA1-228ENST00000618469 C2orf92A0A1B0GVN3 265 aa14.75□□□□□ -0.05
BRCA1-228ENST00000618469 CTIFO43310 598 aaKnown RBP14.75□□□□□ -0.05
BRCA1-228ENST00000618469 ERLIN1O75477 346 aa14.75□□□□□ -0.05
BRCA1-228ENST00000618469 MYZAPP0CAP1 466 aa14.75□□□□□ -0.05
BRCA1-228ENST00000618469 CCL3P10147 92 aa14.75□□□□□ -0.05
BRCA1-228ENST00000618469 DDCP20711 480 aa14.75□□□□□ -0.05
BRCA1-228ENST00000618469 SERPINB4P48594 390 aa14.75□□□□□ -0.05
BRCA1-228ENST00000618469 NR0B1P51843 470 aaKnown RBP14.75□□□□□ -0.05
BRCA1-228ENST00000618469 RPL38P63173 70 aaKnown RBP14.75□□□□□ -0.05
BRCA1-228ENST00000618469 MRPS35P82673 323 aaKnown RBP14.75□□□□□ -0.05
BRCA1-228ENST00000618469 NNATQ16517 81 aa14.75□□□□□ -0.05
BRCA1-228ENST00000618469 LYPD8Q6UX82 237 aa14.75□□□□□ -0.05
BRCA1-228ENST00000618469 CROCCP2Q86T23 111 aa14.75□□□□□ -0.05
BRCA1-228ENST00000618469 EXOC3L1Q86VI1 746 aa14.75□□□□□ -0.05
BRCA1-228ENST00000618469 TAGAPQ8N103 731 aa14.75□□□□□ -0.05
BRCA1-228ENST00000618469 ZNF615Q8N8J6 731 aa14.75□□□□□ -0.05
BRCA1-228ENST00000618469 ZNF441Q8N8Z8 693 aa14.75□□□□□ -0.05
BRCA1-228ENST00000618469 ZFP62Q8NB50 900 aaPredicted RBP14.75□□□□□ -0.05
BRCA1-228ENST00000618469 FAM13CQ8NE31 585 aa14.75□□□□□ -0.05
BRCA1-228ENST00000618469 OR2M7Q8NG81 312 aa14.75□□□□□ -0.05
BRCA1-228ENST00000618469 OR7G1Q8NGA0 311 aa14.75□□□□□ -0.05
BRCA1-228ENST00000618469 OR2T11Q8NH01 316 aa14.75□□□□□ -0.05
BRCA1-228ENST00000618469 C16orf52Q8NHV5 167 aa14.75□□□□□ -0.05
BRCA1-228ENST00000618469 TWIST2Q8WVJ9 160 aa14.75□□□□□ -0.05
BRCA1-228ENST00000618469 SGCZQ96LD1 299 aa14.75□□□□□ -0.05
BRCA1-228ENST00000618469 ZNF681Q96N22 645 aa14.75□□□□□ -0.05
BRCA1-228ENST00000618469 TUBB1Q9H4B7 451 aa14.75□□□□□ -0.05
BRCA1-228ENST00000618469 LRTM1Q9HBL6 345 aa14.75□□□□□ -0.05
BRCA1-228ENST00000618469 MYNNQ9NPC7 610 aa14.75□□□□□ -0.05
BRCA1-228ENST00000618469 MIEF1Q9NQG6 463 aa14.75□□□□□ -0.05
BRCA1-228ENST00000618469 SACM1LQ9NTJ5 587 aa14.75□□□□□ -0.05
BRCA1-228ENST00000618469 C1orf109Q9NX04 203 aa14.75□□□□□ -0.05
BRCA1-228ENST00000618469 EHD3Q9NZN3 535 aa14.75□□□□□ -0.05
BRCA1-228ENST00000618469 BCAP29Q9UHQ4 241 aa14.75□□□□□ -0.05
BRCA1-228ENST00000618469 SH3BGRL2Q9UJC5 107 aa14.75□□□□□ -0.05
BRCA1-228ENST00000618469 DTX4Q9Y2E6 619 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms