RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 HLA-DQA1Q5Y7H0 255 aa19.03■□□□□ 0.64
TRAPPC3-208ENST00000616074 METTL2BQ6P1Q9 378 aaKnown RBP19.03■□□□□ 0.64
TRAPPC3-208ENST00000616074 ATP6V1E2Q96A05 226 aa19.03■□□□□ 0.64
TRAPPC3-208ENST00000616074 TIMP4Q99727 224 aa19.03■□□□□ 0.64
TRAPPC3-208ENST00000616074 GPATCH1Q9BRR8 931 aaKnown RBP19.03■□□□□ 0.64
TRAPPC3-208ENST00000616074 POLDIP3Q9BY77 421 aaKnown RBP19.03■□□□□ 0.64
TRAPPC3-208ENST00000616074 OR10A5Q9H207 317 aa19.03■□□□□ 0.64
TRAPPC3-208ENST00000616074 UBQLN3Q9H347 655 aa19.03■□□□□ 0.64
TRAPPC3-208ENST00000616074 CRIM1Q9NZV1 1036 aa19.03■□□□□ 0.64
TRAPPC3-208ENST00000616074 AHRRA9YTQ3 701 aa19.02■□□□□ 0.64
TRAPPC3-208ENST00000616074 EPPINO95925 133 aa19.02■□□□□ 0.64
TRAPPC3-208ENST00000616074 HPNP05981 417 aa19.02■□□□□ 0.64
TRAPPC3-208ENST00000616074 KLK1P06870 262 aa19.02■□□□□ 0.64
TRAPPC3-208ENST00000616074 CEACAM8P31997 349 aaPredicted RBP19.02■□□□□ 0.64
TRAPPC3-208ENST00000616074 TMED10P49755 219 aaKnown RBP19.02■□□□□ 0.64
TRAPPC3-208ENST00000616074 CCNG1P51959 295 aa19.02■□□□□ 0.64
TRAPPC3-208ENST00000616074 SLC7A5Q01650 507 aa19.02■□□□□ 0.64
TRAPPC3-208ENST00000616074 PRR22Q8IZ63 422 aa19.02■□□□□ 0.64
TRAPPC3-208ENST00000616074 OR4K14Q8NGD5 310 aa19.02■□□□□ 0.64
TRAPPC3-208ENST00000616074 PHF21BQ96EK2 531 aa19.02■□□□□ 0.64
TRAPPC3-208ENST00000616074 GNRHR2Q96P88 292 aa19.02■□□□□ 0.64
TRAPPC3-208ENST00000616074 SECISBP2Q96T21 854 aaKnown RBP19.02■□□□□ 0.64
TRAPPC3-208ENST00000616074 SH3GL2Q99962 352 aa19.02■□□□□ 0.64
TRAPPC3-208ENST00000616074 ANGPTL4Q9BY76 406 aa19.02■□□□□ 0.64
TRAPPC3-208ENST00000616074 MRPL1Q9BYD6 325 aaKnown RBP19.02■□□□□ 0.64
TRAPPC3-208ENST00000616074 LIME1Q9H400 295 aa19.02■□□□□ 0.64
TRAPPC3-208ENST00000616074 ZDHHC18Q9NUE0 388 aa19.02■□□□□ 0.64
TRAPPC3-208ENST00000616074 C15orf41Q9Y2V0 281 aa19.02■□□□□ 0.64
TRAPPC3-208ENST00000616074 IKBKGQ9Y6K9 419 aa19.02■□□□□ 0.64
TRAPPC3-208ENST00000616074 SYT5O00445 386 aa19.01■□□□□ 0.63
TRAPPC3-208ENST00000616074 DVL2O14641 736 aa19.01■□□□□ 0.63
TRAPPC3-208ENST00000616074 SNX4O95219 450 aa19.01■□□□□ 0.63
TRAPPC3-208ENST00000616074 ACSL3O95573 720 aa19.01■□□□□ 0.63
TRAPPC3-208ENST00000616074 CPMP14384 443 aa19.01■□□□□ 0.63
TRAPPC3-208ENST00000616074 NT5EP21589 574 aa19.01■□□□□ 0.63
TRAPPC3-208ENST00000616074 CASP3P42574 277 aa19.01■□□□□ 0.63
TRAPPC3-208ENST00000616074 MASP1P48740 699 aa19.01■□□□□ 0.63
TRAPPC3-208ENST00000616074 ASCL1P50553 236 aa19.01■□□□□ 0.63
TRAPPC3-208ENST00000616074 CDK9P50750 372 aaKnown RBP19.01■□□□□ 0.63
TRAPPC3-208ENST00000616074 XKP51811 444 aa19.01■□□□□ 0.63
TRAPPC3-208ENST00000616074 NRG3P56975 720 aa19.01■□□□□ 0.63
TRAPPC3-208ENST00000616074 TRAF3Q13114 568 aa19.01■□□□□ 0.63
TRAPPC3-208ENST00000616074 FRG2Q64ET8 278 aa19.01■□□□□ 0.63
TRAPPC3-208ENST00000616074 POMZP3Q6PJE2 187 aa19.01■□□□□ 0.63
TRAPPC3-208ENST00000616074 ZNF572Q7Z3I7 529 aaPredicted RBP19.01■□□□□ 0.63
TRAPPC3-208ENST00000616074 LACC1Q8IV20 430 aa19.01■□□□□ 0.63
TRAPPC3-208ENST00000616074 C17orf53Q8N3J3 647 aaPredicted RBP19.01■□□□□ 0.63
TRAPPC3-208ENST00000616074 NINJ1Q92982 152 aa19.01■□□□□ 0.63
TRAPPC3-208ENST00000616074 NSUN5Q96P11 429 aaKnown RBP19.01■□□□□ 0.63
TRAPPC3-208ENST00000616074 FRG2BQ96QU4 278 aa19.01■□□□□ 0.63
TRAPPC3-208ENST00000616074 NTMT1Q9BV86 223 aa19.01■□□□□ 0.63
TRAPPC3-208ENST00000616074 PRDM14Q9GZV8 571 aa19.01■□□□□ 0.63
TRAPPC3-208ENST00000616074 CLEC4MQ9H2X3 399 aaPredicted RBP19.01■□□□□ 0.63
TRAPPC3-208ENST00000616074 ACSS3Q9H6R3 686 aa19.01■□□□□ 0.63
TRAPPC3-208ENST00000616074 ZBTB26Q9HCK0 441 aa19.01■□□□□ 0.63
TRAPPC3-208ENST00000616074 CCM2LQ9NUG4 571 aaPredicted RBP19.01■□□□□ 0.63
TRAPPC3-208ENST00000616074 NINJ2Q9NZG7 142 aa19.01■□□□□ 0.63
TRAPPC3-208ENST00000616074 PCTPQ9UKL6 214 aa19.01■□□□□ 0.63
TRAPPC3-208ENST00000616074 DTX4Q9Y2E6 619 aa19.01■□□□□ 0.63
TRAPPC3-208ENST00000616074 SLC6A5Q9Y345 797 aa19.01■□□□□ 0.63
TRAPPC3-208ENST00000616074 PRRC2AP48634 2157 aaKnown RBP19■□□□□ 0.63
TRAPPC3-208ENST00000616074 FAM221AA4D161 298 aa19■□□□□ 0.63
TRAPPC3-208ENST00000616074 GPX3P22352 226 aa19■□□□□ 0.63
TRAPPC3-208ENST00000616074 ABCD3P28288 659 aa19■□□□□ 0.63
TRAPPC3-208ENST00000616074 TIMP3P35625 211 aa19■□□□□ 0.63
TRAPPC3-208ENST00000616074 PEX19P40855 299 aa19■□□□□ 0.63
TRAPPC3-208ENST00000616074 C6orf163Q5TEZ5 329 aa19■□□□□ 0.63
TRAPPC3-208ENST00000616074 TTC19Q6DKK2 380 aaPredicted RBP19■□□□□ 0.63
TRAPPC3-208ENST00000616074 VASNQ6EMK4 673 aa19■□□□□ 0.63
TRAPPC3-208ENST00000616074 SYT10Q6XYQ8 523 aa19■□□□□ 0.63
TRAPPC3-208ENST00000616074 PACS2Q86VP3 889 aa19■□□□□ 0.63
TRAPPC3-208ENST00000616074 C17orf47Q8NEP4 570 aa19■□□□□ 0.63
TRAPPC3-208ENST00000616074 ANP32BQ92688 251 aaKnown RBP19■□□□□ 0.63
TRAPPC3-208ENST00000616074 RNASE6Q93091 150 aaKnown RBP19■□□□□ 0.63
TRAPPC3-208ENST00000616074 FOXC2Q99958 501 aa19■□□□□ 0.63
TRAPPC3-208ENST00000616074 CXXC4Q9H2H0 198 aa19■□□□□ 0.63
TRAPPC3-208ENST00000616074 RASSF1Q9NS23 344 aa19■□□□□ 0.63
TRAPPC3-208ENST00000616074 XPR1Q9UBH6 696 aa19■□□□□ 0.63
TRAPPC3-208ENST00000616074 ST6GALNAC2Q9UJ37 374 aa19■□□□□ 0.63
TRAPPC3-208ENST00000616074 ADAM29Q9UKF5 820 aa19■□□□□ 0.63
TRAPPC3-208ENST00000616074 CAMK2AQ9UQM7 478 aa19■□□□□ 0.63
TRAPPC3-208ENST00000616074 STX16-NPEPL1H3BU86 382 aa18.99■□□□□ 0.63
TRAPPC3-208ENST00000616074 STX16O14662 325 aa18.99■□□□□ 0.63
TRAPPC3-208ENST00000616074 DIAPH2O60879 1101 aa18.99■□□□□ 0.63
TRAPPC3-208ENST00000616074 PORP16435 677 aaPredicted RBP18.99■□□□□ 0.63
TRAPPC3-208ENST00000616074 S1PR1P21453 382 aa18.99■□□□□ 0.63
TRAPPC3-208ENST00000616074 PHBP35232 272 aa18.99■□□□□ 0.63
TRAPPC3-208ENST00000616074 MAGEA12P43365 314 aa18.99■□□□□ 0.63
TRAPPC3-208ENST00000616074 ZNF136P52737 540 aa18.99■□□□□ 0.63
TRAPPC3-208ENST00000616074 RPP38P78345 283 aaKnown RBP18.99■□□□□ 0.63
TRAPPC3-208ENST00000616074 NNATQ16517 81 aa18.99■□□□□ 0.63
TRAPPC3-208ENST00000616074 FBXL19-AS1Q494R0 122 aa18.99■□□□□ 0.63
TRAPPC3-208ENST00000616074 FLYWCH1Q4VC44 716 aa18.99■□□□□ 0.63
TRAPPC3-208ENST00000616074 EIPR1Q53HC9 387 aa18.99■□□□□ 0.63
TRAPPC3-208ENST00000616074 NHSL2Q5HYW2 709 aa18.99■□□□□ 0.63
TRAPPC3-208ENST00000616074 DCST1Q5T197 706 aa18.99■□□□□ 0.63
TRAPPC3-208ENST00000616074 CCNYL2Q5T2Q4 361 aa18.99■□□□□ 0.63
TRAPPC3-208ENST00000616074 PM20D2Q8IYS1 436 aa18.99■□□□□ 0.63
TRAPPC3-208ENST00000616074 METTL4Q8N3J2 472 aa18.99■□□□□ 0.63
TRAPPC3-208ENST00000616074 OR7G1Q8NGA0 311 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms