RNA–Protein interactions for RNA: ENST00000615061.4

CBWD3-211, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,771 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-211ENST00000615061 DUSP8Q13202 625 aa15.48■□□□□ 0.07
CBWD3-211ENST00000615061 EXOSC7Q15024 291 aaKnown RBP15.48■□□□□ 0.07
CBWD3-211ENST00000615061 INAQ16352 499 aa15.48■□□□□ 0.07
CBWD3-211ENST00000615061 FAM71E1Q6IPT2 247 aa15.48■□□□□ 0.07
CBWD3-211ENST00000615061 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.48■□□□□ 0.07
CBWD3-211ENST00000615061 TICAM1Q8IUC6 712 aa15.48■□□□□ 0.07
CBWD3-211ENST00000615061 LRRC25Q8N386 305 aaPredicted RBP15.48■□□□□ 0.07
CBWD3-211ENST00000615061 ZNF781Q8N8C0 355 aa15.48■□□□□ 0.07
CBWD3-211ENST00000615061 ZNF615Q8N8J6 731 aa15.48■□□□□ 0.07
CBWD3-211ENST00000615061 TMEM178AQ8NBL3 297 aa15.48■□□□□ 0.07
CBWD3-211ENST00000615061 GFM2Q969S9 779 aaKnown RBP15.48■□□□□ 0.07
CBWD3-211ENST00000615061 ARL8AQ96BM9 186 aa15.48■□□□□ 0.07
CBWD3-211ENST00000615061 SLX1AQ9BQ83 275 aa15.48■□□□□ 0.07
CBWD3-211ENST00000615061 WWTR1Q9GZV5 400 aa15.48■□□□□ 0.07
CBWD3-211ENST00000615061 ANKRA2Q9H9E1 313 aa15.48■□□□□ 0.07
CBWD3-211ENST00000615061 PFDN4Q9NQP4 134 aa15.48■□□□□ 0.07
CBWD3-211ENST00000615061 HPF1Q9NWY4 346 aa15.48■□□□□ 0.07
CBWD3-211ENST00000615061 DTX4Q9Y2E6 619 aa15.48■□□□□ 0.07
CBWD3-211ENST00000615061 EXPH5Q8NEV8 1989 aa15.47■□□□□ 0.07
CBWD3-211ENST00000615061 NADKO95544 446 aaPredicted RBP15.47■□□□□ 0.07
CBWD3-211ENST00000615061 NEFHP12036 1026 aa15.47■□□□□ 0.07
CBWD3-211ENST00000615061 DDCP20711 480 aa15.47■□□□□ 0.07
CBWD3-211ENST00000615061 GPR85P60893 370 aa15.47■□□□□ 0.07
CBWD3-211ENST00000615061 ABCE1P61221 599 aaKnown RBP15.47■□□□□ 0.07
CBWD3-211ENST00000615061 TRMT12Q53H54 448 aaKnown RBP15.47■□□□□ 0.07
CBWD3-211ENST00000615061 SLC29A4Q7RTT9 530 aa15.47■□□□□ 0.07
CBWD3-211ENST00000615061 VWA5B2Q8N398 1253 aa15.47■□□□□ 0.07
CBWD3-211ENST00000615061 CPSF7Q8N684 471 aaKnown RBP15.47■□□□□ 0.07
CBWD3-211ENST00000615061 CLHC1Q8NHS4 586 aa15.47■□□□□ 0.07
CBWD3-211ENST00000615061 FAM76AQ8TAV0 307 aa15.47■□□□□ 0.07
CBWD3-211ENST00000615061 NR4A3Q92570 626 aa15.47■□□□□ 0.07
CBWD3-211ENST00000615061 STMN4Q9H169 189 aaPredicted RBP15.47■□□□□ 0.07
CBWD3-211ENST00000615061 TSPAN10Q9H1Z9 355 aaPredicted RBP15.47■□□□□ 0.07
CBWD3-211ENST00000615061 OR10A5Q9H207 317 aa15.47■□□□□ 0.07
CBWD3-211ENST00000615061 MYNNQ9NPC7 610 aa15.47■□□□□ 0.07
CBWD3-211ENST00000615061 SLC35C2Q9NQQ7 365 aa15.47■□□□□ 0.07
CBWD3-211ENST00000615061 BAIAP2L1Q9UHR4 511 aa15.47■□□□□ 0.07
CBWD3-211ENST00000615061 ERVK-11Q9UQG0 969 aa15.47■□□□□ 0.07
CBWD3-211ENST00000615061 ICE1Q9Y2F5 2266 aa15.47■□□□□ 0.07
CBWD3-211ENST00000615061 ANKUB1A6NFN9 424 aa15.47■□□□□ 0.07
CBWD3-211ENST00000615061 CDK2AP1O14519 115 aa15.47■□□□□ 0.07
CBWD3-211ENST00000615061 NME6O75414 186 aaPredicted RBP15.47■□□□□ 0.07
CBWD3-211ENST00000615061 SDC1P18827 310 aa15.47■□□□□ 0.07
CBWD3-211ENST00000615061 TDGF1P3P51864 188 aa15.47■□□□□ 0.07
CBWD3-211ENST00000615061 MPEG1Q2M385 716 aa15.47■□□□□ 0.07
CBWD3-211ENST00000615061 XKR7Q5GH72 579 aa15.47■□□□□ 0.07
CBWD3-211ENST00000615061 PIGGQ5H8A4 983 aa15.47■□□□□ 0.07
CBWD3-211ENST00000615061 TMEM64Q6YI46 380 aa15.47■□□□□ 0.07
CBWD3-211ENST00000615061 OR9A2Q8NGT5 310 aa15.47■□□□□ 0.07
CBWD3-211ENST00000615061 C16orf52Q8NHV5 167 aa15.47■□□□□ 0.07
CBWD3-211ENST00000615061 TMEM125Q96AQ2 219 aa15.47■□□□□ 0.07
CBWD3-211ENST00000615061 FCRL1Q96LA6 429 aa15.47■□□□□ 0.07
CBWD3-211ENST00000615061 FRMD6Q96NE9 622 aa15.47■□□□□ 0.07
CBWD3-211ENST00000615061 SORT1Q99523 831 aa15.47■□□□□ 0.07
CBWD3-211ENST00000615061 DEPPQ9NTK1 212 aa15.47■□□□□ 0.07
CBWD3-211ENST00000615061 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.47■□□□□ 0.07
CBWD3-211ENST00000615061 DOPEY1Q5JWR5 2465 aa15.46■□□□□ 0.07
CBWD3-211ENST00000615061 C2orf92A0A1B0GVN3 265 aa15.46■□□□□ 0.07
CBWD3-211ENST00000615061 ASPDHA6ND91 283 aa15.46■□□□□ 0.07
CBWD3-211ENST00000615061 PEX11AO75192 247 aa15.46■□□□□ 0.07
CBWD3-211ENST00000615061 LRATO95237 230 aa15.46■□□□□ 0.07
CBWD3-211ENST00000615061 CBX7O95931 251 aa15.46■□□□□ 0.07
CBWD3-211ENST00000615061 PCSK2P16519 638 aa15.46■□□□□ 0.07
CBWD3-211ENST00000615061 RFC3P40938 356 aa15.46■□□□□ 0.07
CBWD3-211ENST00000615061 SLC1A6P48664 564 aa15.46■□□□□ 0.07
CBWD3-211ENST00000615061 MAP4K2Q12851 820 aa15.46■□□□□ 0.07
CBWD3-211ENST00000615061 RNFT1Q5M7Z0 435 aa15.46■□□□□ 0.07
CBWD3-211ENST00000615061 C6orf163Q5TEZ5 329 aa15.46■□□□□ 0.07
CBWD3-211ENST00000615061 HHATQ5VTY9 493 aa15.46■□□□□ 0.07
CBWD3-211ENST00000615061 ANKRD26P1Q6NSI1 321 aa15.46■□□□□ 0.07
CBWD3-211ENST00000615061 LYPD8Q6UX82 237 aa15.46■□□□□ 0.07
CBWD3-211ENST00000615061 SULF2Q8IWU5 870 aa15.46■□□□□ 0.07
CBWD3-211ENST00000615061 PSD4Q8NDX1 1056 aa15.46■□□□□ 0.07
CBWD3-211ENST00000615061 PRR7Q8TB68 274 aa15.46■□□□□ 0.07
CBWD3-211ENST00000615061 KAT2AQ92830 837 aa15.46■□□□□ 0.07
CBWD3-211ENST00000615061 CTHRC1Q96CG8 243 aa15.46■□□□□ 0.07
CBWD3-211ENST00000615061 METTL2AQ96IZ6 378 aaKnown RBP15.46■□□□□ 0.07
CBWD3-211ENST00000615061 PPP1R36Q96LQ0 422 aa15.46■□□□□ 0.07
CBWD3-211ENST00000615061 TSSK3Q96PN8 268 aa15.46■□□□□ 0.07
CBWD3-211ENST00000615061 MIEF1Q9NQG6 463 aa15.46■□□□□ 0.07
CBWD3-211ENST00000615061 EHD3Q9NZN3 535 aa15.46■□□□□ 0.07
CBWD3-211ENST00000615061 ZNF639Q9UID6 485 aa15.46■□□□□ 0.07
CBWD3-211ENST00000615061 ENTPD4Q9Y227 616 aa15.46■□□□□ 0.07
CBWD3-211ENST00000615061 FREM3P0C091 2139 aa15.46■□□□□ 0.06
CBWD3-211ENST00000615061 A0A0G2JMM0 328 aa15.45■□□□□ 0.06
CBWD3-211ENST00000615061 A0A1W2PPB8 328 aa15.45■□□□□ 0.06
CBWD3-211ENST00000615061 A0A1W2PRS3 328 aa15.45■□□□□ 0.06
CBWD3-211ENST00000615061 OR6C76A6NM76 312 aa15.45■□□□□ 0.06
CBWD3-211ENST00000615061 KIR3DP1A8MWS1 328 aa15.45■□□□□ 0.06
CBWD3-211ENST00000615061 TMEM114B3SHH9 223 aa15.45■□□□□ 0.06
CBWD3-211ENST00000615061 G3V3Y1 287 aa15.45■□□□□ 0.06
CBWD3-211ENST00000615061 GSTM5P46439 218 aa15.45■□□□□ 0.06
CBWD3-211ENST00000615061 NR0B1P51843 470 aaKnown RBP15.45■□□□□ 0.06
CBWD3-211ENST00000615061 BST1Q10588 318 aa15.45■□□□□ 0.06
CBWD3-211ENST00000615061 CEBPEQ15744 281 aa15.45■□□□□ 0.06
CBWD3-211ENST00000615061 PDCD2Q16342 344 aaPredicted RBP15.45■□□□□ 0.06
CBWD3-211ENST00000615061 ZNF628Q5EBL2 1059 aa15.45■□□□□ 0.06
CBWD3-211ENST00000615061 ZNF441Q8N8Z8 693 aa15.45■□□□□ 0.06
CBWD3-211ENST00000615061 ST6GALNAC3Q8NDV1 305 aa15.45■□□□□ 0.06
CBWD3-211ENST00000615061 BCAP29Q9UHQ4 241 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms