RNA–Protein interactions for RNA: ENST00000613795.4

CLCN3-211, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,874 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-211ENST00000613795 ZNF20P17024 532 aa6.58□□□□□ -1.36
CLCN3-211ENST00000613795 RBMS1P29558 406 aaKnown RBP6.58□□□□□ -1.36
CLCN3-211ENST00000613795 CCKBRP32239 447 aa6.58□□□□□ -1.36
CLCN3-211ENST00000613795 CSKP41240 450 aa6.58□□□□□ -1.36
CLCN3-211ENST00000613795 MECP2P51608 486 aaKnown RBP6.58□□□□□ -1.36
CLCN3-211ENST00000613795 WNT4P56705 351 aa6.58□□□□□ -1.36
CLCN3-211ENST00000613795 ACTA2P62736 377 aa6.58□□□□□ -1.36
CLCN3-211ENST00000613795 ACTG2P63267 376 aa6.58□□□□□ -1.36
CLCN3-211ENST00000613795 TNFAIP8L2Q6P589 184 aaPredicted RBP6.58□□□□□ -1.36
CLCN3-211ENST00000613795 PXKQ7Z7A4 578 aa6.58□□□□□ -1.36
CLCN3-211ENST00000613795 DPPA2Q7Z7J5 298 aa6.58□□□□□ -1.36
CLCN3-211ENST00000613795 OR56B4Q8NH76 319 aa6.58□□□□□ -1.36
CLCN3-211ENST00000613795 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.58□□□□□ -1.36
CLCN3-211ENST00000613795 ADAMTS18Q8TE60 1221 aa6.58□□□□□ -1.36
CLCN3-211ENST00000613795 PSMG2Q969U7 264 aa6.58□□□□□ -1.36
CLCN3-211ENST00000613795 SLC41A3Q96GZ6 507 aa6.58□□□□□ -1.36
CLCN3-211ENST00000613795 ADAD1Q96M93 576 aaKnown RBP6.58□□□□□ -1.36
CLCN3-211ENST00000613795 HIST1H2AAQ96QV6 131 aa6.58□□□□□ -1.36
CLCN3-211ENST00000613795 OR14A2Q96R54 314 aa6.58□□□□□ -1.36
CLCN3-211ENST00000613795 CD180Q99467 661 aa6.58□□□□□ -1.36
CLCN3-211ENST00000613795 OR51B5Q9H339 312 aa6.58□□□□□ -1.36
CLCN3-211ENST00000613795 ACTL8Q9H568 366 aa6.58□□□□□ -1.36
CLCN3-211ENST00000613795 EQTNQ9NQ60 294 aa6.58□□□□□ -1.36
CLCN3-211ENST00000613795 GALPQ9UBC7 116 aa6.58□□□□□ -1.36
CLCN3-211ENST00000613795 RBPJLQ9UBG7 517 aa6.58□□□□□ -1.36
CLCN3-211ENST00000613795 ZNF225Q9UK10 706 aa6.58□□□□□ -1.36
CLCN3-211ENST00000613795 PRELID3BQ9Y3B1 194 aa6.58□□□□□ -1.36
CLCN3-211ENST00000613795 PCDHGA8Q9Y5G5 932 aa6.58□□□□□ -1.36
CLCN3-211ENST00000613795 HEMK1Q9Y5R4 338 aaPredicted RBP6.58□□□□□ -1.36
CLCN3-211ENST00000613795 C7orf72A4D263 438 aa6.58□□□□□ -1.36
CLCN3-211ENST00000613795 ZNF705GA8MUZ8 300 aaPredicted RBP6.58□□□□□ -1.36
CLCN3-211ENST00000613795 WASH4PA8MWX3 477 aa6.58□□□□□ -1.36
CLCN3-211ENST00000613795 FMO6PO60774 539 aa6.58□□□□□ -1.36
CLCN3-211ENST00000613795 SDC3O75056 442 aa6.58□□□□□ -1.36
CLCN3-211ENST00000613795 ZNF780AO75290 641 aaPredicted RBP6.58□□□□□ -1.36
CLCN3-211ENST00000613795 CSF1P09603 554 aa6.58□□□□□ -1.36
CLCN3-211ENST00000613795 ATP1B2P14415 290 aaPredicted RBP6.58□□□□□ -1.36
CLCN3-211ENST00000613795 BTG1P62324 171 aa6.58□□□□□ -1.36
CLCN3-211ENST00000613795 RCAN2Q14206 197 aa6.58□□□□□ -1.36
CLCN3-211ENST00000613795 LASP1Q14847 261 aaKnown RBP6.58□□□□□ -1.36
CLCN3-211ENST00000613795 LRRC28Q86X40 367 aaPredicted RBP6.58□□□□□ -1.36
CLCN3-211ENST00000613795 DCUN1D3Q8IWE4 304 aa6.58□□□□□ -1.36
CLCN3-211ENST00000613795 NXPE1Q8N323 547 aa6.58□□□□□ -1.36
CLCN3-211ENST00000613795 ARL14EPQ8N8R7 260 aaPredicted RBP6.58□□□□□ -1.36
CLCN3-211ENST00000613795 DCAF4L2Q8NA75 395 aa6.58□□□□□ -1.36
CLCN3-211ENST00000613795 OR6K6Q8NGW6 343 aa6.58□□□□□ -1.36
CLCN3-211ENST00000613795 OR4Q3Q8NH05 313 aa6.58□□□□□ -1.36
CLCN3-211ENST00000613795 SLC5A11Q8WWX8 675 aa6.58□□□□□ -1.36
CLCN3-211ENST00000613795 SMPDL3AQ92484 453 aa6.58□□□□□ -1.36
CLCN3-211ENST00000613795 ZNF578Q96N58 590 aaPredicted RBP6.58□□□□□ -1.36
CLCN3-211ENST00000613795 FAM83CQ9BQN1 747 aa6.58□□□□□ -1.36
CLCN3-211ENST00000613795 GSX2Q9BZM3 304 aa6.58□□□□□ -1.36
CLCN3-211ENST00000613795 ARHGAP39Q9C0H5 1083 aa6.58□□□□□ -1.36
CLCN3-211ENST00000613795 FCF1Q9Y324 198 aaKnown RBP6.58□□□□□ -1.36
CLCN3-211ENST00000613795 WASH3PC4AMC7 463 aa6.57□□□□□ -1.36
CLCN3-211ENST00000613795 NRP1O14786 923 aa6.57□□□□□ -1.36
CLCN3-211ENST00000613795 HNRNPA1P09651 372 aaKnown RBP eCLIP6.57□□□□□ -1.36
CLCN3-211ENST00000613795 GGT2P36268 569 aa6.57□□□□□ -1.36
CLCN3-211ENST00000613795 MASP1P48740 699 aa6.57□□□□□ -1.36
CLCN3-211ENST00000613795 IDH3GP51553 393 aaPredicted RBP6.57□□□□□ -1.36
CLCN3-211ENST00000613795 DIO3P55073 304 aa6.57□□□□□ -1.36
CLCN3-211ENST00000613795 VLDLRP98155 873 aa6.57□□□□□ -1.36
CLCN3-211ENST00000613795 GALNT2Q10471 571 aa6.57□□□□□ -1.36
CLCN3-211ENST00000613795 FXNQ16595 210 aa6.57□□□□□ -1.36
CLCN3-211ENST00000613795 ZNF792Q3KQV3 632 aa6.57□□□□□ -1.36
CLCN3-211ENST00000613795 TIGD5Q53EQ6 642 aa6.57□□□□□ -1.36
CLCN3-211ENST00000613795 FAM205BPQ63HN1 556 aa6.57□□□□□ -1.36
CLCN3-211ENST00000613795 ENPP6Q6UWR7 440 aa6.57□□□□□ -1.36
CLCN3-211ENST00000613795 RTL10Q7L3V2 364 aa6.57□□□□□ -1.36
CLCN3-211ENST00000613795 VASH1Q7L8A9 365 aaPredicted RBP6.57□□□□□ -1.36
CLCN3-211ENST00000613795 BPHLQ86WA6 291 aaPredicted RBP6.57□□□□□ -1.36
CLCN3-211ENST00000613795 LSMEM1Q8N8F7 131 aa6.57□□□□□ -1.36
CLCN3-211ENST00000613795 PXT1Q8NFP0 134 aa6.57□□□□□ -1.36
CLCN3-211ENST00000613795 OR7D4Q8NG98 312 aa6.57□□□□□ -1.36
CLCN3-211ENST00000613795 TRMT10AQ8TBZ6 339 aaKnown RBP6.57□□□□□ -1.36
CLCN3-211ENST00000613795 SCGB1C1Q8TD33 95 aa6.57□□□□□ -1.36
CLCN3-211ENST00000613795 LMLNQ96KR4 655 aa6.57□□□□□ -1.36
CLCN3-211ENST00000613795 CDK15Q96Q40 435 aa6.57□□□□□ -1.36
CLCN3-211ENST00000613795 DPEP2Q9H4A9 486 aa6.57□□□□□ -1.36
CLCN3-211ENST00000613795 GOLGA2P5Q9HBQ8 144 aa6.57□□□□□ -1.36
CLCN3-211ENST00000613795 NDRG3Q9UGV2 375 aa6.57□□□□□ -1.36
CLCN3-211ENST00000613795 ACSL6Q9UKU0 697 aa6.57□□□□□ -1.36
CLCN3-211ENST00000613795 PCDHAC2Q9Y5I4 1007 aa6.57□□□□□ -1.36
CLCN3-211ENST00000613795 PCYT1BQ9Y5K3 369 aaPredicted RBP6.57□□□□□ -1.36
CLCN3-211ENST00000613795 NUMBLQ9Y6R0 609 aa6.57□□□□□ -1.36
CLCN3-211ENST00000613795 UPK3BL1B0FP48 263 aa6.57□□□□□ -1.36
CLCN3-211ENST00000613795 UPK3BL2E5RIL1 263 aa6.57□□□□□ -1.36
CLCN3-211ENST00000613795 TOR1AO14656 332 aa6.57□□□□□ -1.36
CLCN3-211ENST00000613795 SORBS2O94875 1100 aaKnown RBP6.57□□□□□ -1.36
CLCN3-211ENST00000613795 IFNA5P01569 189 aa6.57□□□□□ -1.36
CLCN3-211ENST00000613795 ETFAP13804 333 aa6.57□□□□□ -1.36
CLCN3-211ENST00000613795 UGT2B7P16662 529 aa6.57□□□□□ -1.36
CLCN3-211ENST00000613795 CDK2P24941 298 aa6.57□□□□□ -1.36
CLCN3-211ENST00000613795 SSTR2P30874 369 aa6.57□□□□□ -1.36
CLCN3-211ENST00000613795 SLC6A6P31641 620 aa6.57□□□□□ -1.36
CLCN3-211ENST00000613795 TAS2R31P59538 309 aa6.57□□□□□ -1.36
CLCN3-211ENST00000613795 TAP2Q03519 686 aa6.57□□□□□ -1.36
CLCN3-211ENST00000613795 GPM6BQ13491 265 aa6.57□□□□□ -1.36
CLCN3-211ENST00000613795 GAS6Q14393 721 aa6.57□□□□□ -1.36
CLCN3-211ENST00000613795 CELF2-AS1Q8N7Q2 184 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms