RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 PGBD2Q6P3X8 592 aa13.29□□□□□ -0.28
PCDHGA3-202ENST00000612467 PODNL1Q6PEZ8 512 aa13.29□□□□□ -0.28
PCDHGA3-202ENST00000612467 OR4N5Q8IXE1 308 aa13.29□□□□□ -0.28
PCDHGA3-202ENST00000612467 TMEFF1Q8IYR6 380 aa13.29□□□□□ -0.28
PCDHGA3-202ENST00000612467 TCEANCQ8N8B7 351 aa13.29□□□□□ -0.28
PCDHGA3-202ENST00000612467 VMP1Q96GC9 406 aa13.29□□□□□ -0.28
PCDHGA3-202ENST00000612467 SLC6A18Q96N87 628 aa13.29□□□□□ -0.28
PCDHGA3-202ENST00000612467 RERGLQ9H628 205 aa13.29□□□□□ -0.28
PCDHGA3-202ENST00000612467 PRDM7Q9NQW5 492 aa13.29□□□□□ -0.28
PCDHGA3-202ENST00000612467 ABCB10Q9NRK6 738 aa13.29□□□□□ -0.28
PCDHGA3-202ENST00000612467 PLCXD1Q9NUJ7 323 aa13.29□□□□□ -0.28
PCDHGA3-202ENST00000612467 TBC1D29Q9UFV1 150 aa13.29□□□□□ -0.28
PCDHGA3-202ENST00000612467 GPR55Q9Y2T6 319 aaPredicted RBP13.29□□□□□ -0.28
PCDHGA3-202ENST00000612467 IFT52Q9Y366 437 aa13.29□□□□□ -0.28
PCDHGA3-202ENST00000612467 PNMA8CA0A1B0GUJ8 204 aa13.29□□□□□ -0.28
PCDHGA3-202ENST00000612467 CLDN24A6NM45 220 aa13.29□□□□□ -0.28
PCDHGA3-202ENST00000612467 TLR4O00206 839 aa13.29□□□□□ -0.28
PCDHGA3-202ENST00000612467 MAN2B1O00754 1011 aa13.29□□□□□ -0.28
PCDHGA3-202ENST00000612467 PKLRP30613 574 aa13.29□□□□□ -0.28
PCDHGA3-202ENST00000612467 MC3RP41968 323 aa13.29□□□□□ -0.28
PCDHGA3-202ENST00000612467 TGM4P49221 684 aa13.29□□□□□ -0.28
PCDHGA3-202ENST00000612467 RGS6P49758 472 aa13.29□□□□□ -0.28
PCDHGA3-202ENST00000612467 SEPHS1P49903 392 aa13.29□□□□□ -0.28
PCDHGA3-202ENST00000612467 BCAP31P51572 246 aa13.29□□□□□ -0.28
PCDHGA3-202ENST00000612467 MLLT1Q03111 559 aaPredicted RBP13.29□□□□□ -0.28
PCDHGA3-202ENST00000612467 MAP4K2Q12851 820 aa13.29□□□□□ -0.28
PCDHGA3-202ENST00000612467 TMEM196Q5HYL7 178 aa13.29□□□□□ -0.28
PCDHGA3-202ENST00000612467 DEPDC4Q8N2C3 294 aa13.29□□□□□ -0.28
PCDHGA3-202ENST00000612467 OR2L3Q8NG85 312 aa13.29□□□□□ -0.28
PCDHGA3-202ENST00000612467 OR9A2Q8NGT5 310 aa13.29□□□□□ -0.28
PCDHGA3-202ENST00000612467 TSACCQ96A04 125 aaPredicted RBP13.29□□□□□ -0.28
PCDHGA3-202ENST00000612467 ZNF354BQ96LW1 612 aa13.29□□□□□ -0.28
PCDHGA3-202ENST00000612467 UCK2Q9BZX2 261 aa13.29□□□□□ -0.28
PCDHGA3-202ENST00000612467 GDE1Q9NZC3 331 aa13.29□□□□□ -0.28
PCDHGA3-202ENST00000612467 ACSL5Q9ULC5 683 aa13.29□□□□□ -0.28
PCDHGA3-202ENST00000612467 TMCC3Q9ULS5 477 aa13.29□□□□□ -0.28
PCDHGA3-202ENST00000612467 AGRPO00253 132 aa13.28□□□□□ -0.28
PCDHGA3-202ENST00000612467 GTF2E2P29084 291 aaKnown RBP13.28□□□□□ -0.28
PCDHGA3-202ENST00000612467 RXRGP48443 463 aa13.28□□□□□ -0.28
PCDHGA3-202ENST00000612467 SERPINB10P48595 397 aa13.28□□□□□ -0.28
PCDHGA3-202ENST00000612467 RPE65Q16518 533 aa13.28□□□□□ -0.28
PCDHGA3-202ENST00000612467 GPAT3Q53EU6 434 aa13.28□□□□□ -0.28
PCDHGA3-202ENST00000612467 UBE2Q1Q7Z7E8 422 aa13.28□□□□□ -0.28
PCDHGA3-202ENST00000612467 IQCHQ86VS3 1027 aa13.28□□□□□ -0.28
PCDHGA3-202ENST00000612467 FAM83FQ8NEG4 500 aaPredicted RBP13.28□□□□□ -0.28
PCDHGA3-202ENST00000612467 DENND6BQ8NEG7 585 aa13.28□□□□□ -0.28
PCDHGA3-202ENST00000612467 MAPKAP1Q9BPZ7 522 aa13.28□□□□□ -0.28
PCDHGA3-202ENST00000612467 TVP23BQ9NYZ1 205 aa13.28□□□□□ -0.28
PCDHGA3-202ENST00000612467 ASB4Q9Y574 426 aa13.28□□□□□ -0.28
PCDHGA3-202ENST00000612467 KRBA1A5PL33 1030 aa13.28□□□□□ -0.28
PCDHGA3-202ENST00000612467 TP53P04637 393 aaPredicted RBP13.28□□□□□ -0.28
PCDHGA3-202ENST00000612467 C5AR1P21730 350 aa13.28□□□□□ -0.28
PCDHGA3-202ENST00000612467 HIST1H1TP22492 207 aaPredicted RBP13.28□□□□□ -0.28
PCDHGA3-202ENST00000612467 KIR2DL1P43626 348 aaPredicted RBP13.28□□□□□ -0.28
PCDHGA3-202ENST00000612467 OLR1P78380 273 aa13.28□□□□□ -0.28
PCDHGA3-202ENST00000612467 DLX2Q07687 328 aaPredicted RBP13.28□□□□□ -0.28
PCDHGA3-202ENST00000612467 SSX1Q16384 188 aa13.28□□□□□ -0.28
PCDHGA3-202ENST00000612467 INAVAQ3KP66 663 aa13.28□□□□□ -0.28
PCDHGA3-202ENST00000612467 ABHD17CQ6PCB6 329 aa13.28□□□□□ -0.28
PCDHGA3-202ENST00000612467 COL26A1Q96A83 441 aa13.28□□□□□ -0.28
PCDHGA3-202ENST00000612467 POLR2J3Q9H1A7 115 aaKnown RBP13.28□□□□□ -0.28
PCDHGA3-202ENST00000612467 MAN2C1Q9NTJ4 1040 aa13.28□□□□□ -0.28
PCDHGA3-202ENST00000612467 DSPPQ9NZW4 1301 aa13.28□□□□□ -0.28
PCDHGA3-202ENST00000612467 CLEC3AO75596 197 aa13.27□□□□□ -0.28
PCDHGA3-202ENST00000612467 MMP11P24347 488 aa13.27□□□□□ -0.28
PCDHGA3-202ENST00000612467 ATP5A1P25705 553 aaKnown RBP13.27□□□□□ -0.28
PCDHGA3-202ENST00000612467 XKP51811 444 aa13.27□□□□□ -0.28
PCDHGA3-202ENST00000612467 ERVK-21P61565 698 aa13.27□□□□□ -0.28
PCDHGA3-202ENST00000612467 ID2Q02363 134 aa13.27□□□□□ -0.28
PCDHGA3-202ENST00000612467 ELOAQ14241 798 aaKnown RBP13.27□□□□□ -0.28
PCDHGA3-202ENST00000612467 SLC9A5Q14940 896 aa13.27□□□□□ -0.28
PCDHGA3-202ENST00000612467 ZER1Q7Z7L7 766 aa13.27□□□□□ -0.28
PCDHGA3-202ENST00000612467 VRK2Q86Y07 508 aa13.27□□□□□ -0.28
PCDHGA3-202ENST00000612467 CYP4Z2PQ8N1L4 340 aa13.27□□□□□ -0.28
PCDHGA3-202ENST00000612467 ZCCHC10Q8TBK6 192 aa13.27□□□□□ -0.28
PCDHGA3-202ENST00000612467 MGLLQ99685 303 aa13.27□□□□□ -0.28
PCDHGA3-202ENST00000612467 APOOQ9BUR5 198 aa13.27□□□□□ -0.28
PCDHGA3-202ENST00000612467 CDADC1Q9BWV3 514 aa13.27□□□□□ -0.28
PCDHGA3-202ENST00000612467 PLA2G12AQ9BZM1 189 aa13.27□□□□□ -0.28
PCDHGA3-202ENST00000612467 PCBD2Q9H0N5 130 aa13.27□□□□□ -0.28
PCDHGA3-202ENST00000612467 POLMQ9NP87 494 aaPredicted RBP13.27□□□□□ -0.28
PCDHGA3-202ENST00000612467 P2RX2Q9UBL9 471 aa13.27□□□□□ -0.28
PCDHGA3-202ENST00000612467 METTL15A6NJ78 407 aa13.27□□□□□ -0.29
PCDHGA3-202ENST00000612467 ARHGAP33O14559 1287 aa13.27□□□□□ -0.29
PCDHGA3-202ENST00000612467 TBX1O43435 398 aa13.27□□□□□ -0.29
PCDHGA3-202ENST00000612467 PRKYO43930 277 aa13.27□□□□□ -0.29
PCDHGA3-202ENST00000612467 ADAM23O75077 832 aa13.27□□□□□ -0.29
PCDHGA3-202ENST00000612467 OSMP13725 252 aa13.27□□□□□ -0.29
PCDHGA3-202ENST00000612467 ADPRHP54922 357 aa13.27□□□□□ -0.29
PCDHGA3-202ENST00000612467 BTN3A2P78410 334 aa13.27□□□□□ -0.29
PCDHGA3-202ENST00000612467 RELAQ04206 551 aa13.27□□□□□ -0.29
PCDHGA3-202ENST00000612467 IRF3Q14653 427 aa13.27□□□□□ -0.29
PCDHGA3-202ENST00000612467 OXA1LQ15070 435 aa13.27□□□□□ -0.29
PCDHGA3-202ENST00000612467 TBC1D19Q8N5T2 526 aa13.27□□□□□ -0.29
PCDHGA3-202ENST00000612467 OR2L8Q8NGY9 312 aa13.27□□□□□ -0.29
PCDHGA3-202ENST00000612467 TRMT61AQ96FX7 289 aaKnown RBP13.27□□□□□ -0.29
PCDHGA3-202ENST00000612467 QRFPRQ96P65 431 aa13.27□□□□□ -0.29
PCDHGA3-202ENST00000612467 KCNS3Q9BQ31 491 aa13.27□□□□□ -0.29
PCDHGA3-202ENST00000612467 NEURL2Q9BR09 285 aa13.27□□□□□ -0.29
PCDHGA3-202ENST00000612467 C1QTNF2Q9BXJ5 285 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms