RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 TRIM46Q7Z4K8 759 aa11.4□□□□□ -0.58
CBWD3-208ENST00000612050 SPPL2CQ8IUH8 684 aa11.4□□□□□ -0.58
CBWD3-208ENST00000612050 DDIASQ8IXT1 998 aa11.4□□□□□ -0.58
CBWD3-208ENST00000612050 FAM9CQ8IZT9 166 aa11.4□□□□□ -0.58
CBWD3-208ENST00000612050 KIRREL3Q8IZU9 778 aa11.4□□□□□ -0.58
CBWD3-208ENST00000612050 ZFP62Q8NB50 900 aaPredicted RBP11.4□□□□□ -0.58
CBWD3-208ENST00000612050 C17orf47Q8NEP4 570 aa11.4□□□□□ -0.58
CBWD3-208ENST00000612050 OR2M7Q8NG81 312 aa11.4□□□□□ -0.58
CBWD3-208ENST00000612050 TCP10LQ8TDR4 215 aa11.4□□□□□ -0.58
CBWD3-208ENST00000612050 C16orf78Q8WTQ4 265 aa11.4□□□□□ -0.58
CBWD3-208ENST00000612050 RELTQ969Z4 430 aa11.4□□□□□ -0.58
CBWD3-208ENST00000612050 EXOSC8Q96B26 276 aaKnown RBP11.4□□□□□ -0.58
CBWD3-208ENST00000612050 ERP27Q96DN0 273 aa11.4□□□□□ -0.58
CBWD3-208ENST00000612050 APIPQ96GX9 242 aa11.4□□□□□ -0.58
CBWD3-208ENST00000612050 PSMG3-AS1Q96PY0 264 aa11.4□□□□□ -0.58
CBWD3-208ENST00000612050 EBPLQ9BY08 206 aa11.4□□□□□ -0.58
CBWD3-208ENST00000612050 EXO5Q9H790 373 aa11.4□□□□□ -0.58
CBWD3-208ENST00000612050 SIRT5Q9NXA8 310 aa11.4□□□□□ -0.58
CBWD3-208ENST00000612050 PLEKHB1Q9UF11 243 aaPredicted RBP11.4□□□□□ -0.58
CBWD3-208ENST00000612050 ZGRF1Q86YA3 2104 aa11.4□□□□□ -0.58
CBWD3-208ENST00000612050 TMEM200CA6NKL6 621 aa11.39□□□□□ -0.59
CBWD3-208ENST00000612050 WASHC1A8K0Z3 465 aa11.39□□□□□ -0.59
CBWD3-208ENST00000612050 UBFD1O14562 309 aaKnown RBP11.39□□□□□ -0.59
CBWD3-208ENST00000612050 HS6ST1O60243 411 aa11.39□□□□□ -0.59
CBWD3-208ENST00000612050 SLITRK5O94991 958 aa11.39□□□□□ -0.59
CBWD3-208ENST00000612050 CHN1P15882 459 aa11.39□□□□□ -0.59
CBWD3-208ENST00000612050 MAPK1P28482 360 aa11.39□□□□□ -0.59
CBWD3-208ENST00000612050 ALDH3A1P30838 453 aa11.39□□□□□ -0.59
CBWD3-208ENST00000612050 PTGS2P35354 604 aa11.39□□□□□ -0.59
CBWD3-208ENST00000612050 RPS6KA2Q15349 733 aa11.39□□□□□ -0.59
CBWD3-208ENST00000612050 TMEM198Q66K66 360 aa11.39□□□□□ -0.59
CBWD3-208ENST00000612050 DGAT2L6Q6ZPD8 337 aa11.39□□□□□ -0.59
CBWD3-208ENST00000612050 ZNF227Q86WZ6 799 aa11.39□□□□□ -0.59
CBWD3-208ENST00000612050 CLYBLQ8N0X4 340 aa11.39□□□□□ -0.59
CBWD3-208ENST00000612050 FAM109AQ8N4B1 249 aa11.39□□□□□ -0.59
CBWD3-208ENST00000612050 CCT7Q99832 543 aa11.39□□□□□ -0.59
CBWD3-208ENST00000612050 GATA5Q9BWX5 397 aaPredicted RBP11.39□□□□□ -0.59
CBWD3-208ENST00000612050 LDAHQ9H6V9 325 aa11.39□□□□□ -0.59
CBWD3-208ENST00000612050 IL1RL2Q9HB29 575 aa11.39□□□□□ -0.59
CBWD3-208ENST00000612050 LRTM1Q9HBL6 345 aa11.39□□□□□ -0.59
CBWD3-208ENST00000612050 SLC35C2Q9NQQ7 365 aa11.39□□□□□ -0.59
CBWD3-208ENST00000612050 C1orf109Q9NX04 203 aa11.39□□□□□ -0.59
CBWD3-208ENST00000612050 RAB21Q9UL25 225 aa11.39□□□□□ -0.59
CBWD3-208ENST00000612050 TMED5Q9Y3A6 229 aa11.39□□□□□ -0.59
CBWD3-208ENST00000612050 NPFFR2Q9Y5X5 522 aa11.39□□□□□ -0.59
CBWD3-208ENST00000612050 SVILO95425 2214 aa11.38□□□□□ -0.59
CBWD3-208ENST00000612050 A1L4Q6 167 aa11.38□□□□□ -0.59
CBWD3-208ENST00000612050 TMEM114B3SHH9 223 aa11.38□□□□□ -0.59
CBWD3-208ENST00000612050 HRKO00198 91 aa11.38□□□□□ -0.59
CBWD3-208ENST00000612050 ACOX3O15254 700 aa11.38□□□□□ -0.59
CBWD3-208ENST00000612050 TM9SF1O15321 606 aa11.38□□□□□ -0.59
CBWD3-208ENST00000612050 COQ9O75208 318 aa11.38□□□□□ -0.59
CBWD3-208ENST00000612050 SNUPNO95149 360 aaKnown RBP11.38□□□□□ -0.59
CBWD3-208ENST00000612050 TPOP07202 933 aa11.38□□□□□ -0.59
CBWD3-208ENST00000612050 FBXO45P0C2W1 286 aa11.38□□□□□ -0.59
CBWD3-208ENST00000612050 DDCP20711 480 aa11.38□□□□□ -0.59
CBWD3-208ENST00000612050 RFC3P40938 356 aa11.38□□□□□ -0.59
CBWD3-208ENST00000612050 MASP1P48740 699 aa11.38□□□□□ -0.59
CBWD3-208ENST00000612050 FOXA1P55317 472 aa11.38□□□□□ -0.59
CBWD3-208ENST00000612050 PRICKLE4Q2TBC4 344 aa11.38□□□□□ -0.59
CBWD3-208ENST00000612050 ZNF791Q3KP31 576 aaPredicted RBP11.38□□□□□ -0.59
CBWD3-208ENST00000612050 CEP85LQ5SZL2 805 aa11.38□□□□□ -0.59
CBWD3-208ENST00000612050 CLEC6AQ6EIG7 209 aa11.38□□□□□ -0.59
CBWD3-208ENST00000612050 PACS2Q86VP3 889 aa11.38□□□□□ -0.59
CBWD3-208ENST00000612050 NUDCD3Q8IVD9 361 aa11.38□□□□□ -0.59
CBWD3-208ENST00000612050 CCDC116Q8IYX3 515 aa11.38□□□□□ -0.59
CBWD3-208ENST00000612050 FBXW8Q8N3Y1 598 aa11.38□□□□□ -0.59
CBWD3-208ENST00000612050 LIX1Q8N485 282 aa11.38□□□□□ -0.59
CBWD3-208ENST00000612050 OR5M3Q8NGP4 307 aa11.38□□□□□ -0.59
CBWD3-208ENST00000612050 ZFP28Q8NHY6 868 aa11.38□□□□□ -0.59
CBWD3-208ENST00000612050 ZNF675Q8TD23 568 aa11.38□□□□□ -0.59
CBWD3-208ENST00000612050 DOK4Q8TEW6 326 aa11.38□□□□□ -0.59
CBWD3-208ENST00000612050 PAQR8Q8TEZ7 354 aa11.38□□□□□ -0.59
CBWD3-208ENST00000612050 DIO2Q92813 273 aa11.38□□□□□ -0.59
CBWD3-208ENST00000612050 UCN3Q969E3 161 aa11.38□□□□□ -0.59
CBWD3-208ENST00000612050 HSPBAP1Q96EW2 488 aa11.38□□□□□ -0.59
CBWD3-208ENST00000612050 LCORQ96JN0 433 aaPredicted RBP11.38□□□□□ -0.59
CBWD3-208ENST00000612050 ZNF597Q96LX8 424 aa11.38□□□□□ -0.59
CBWD3-208ENST00000612050 JSRP1Q96MG2 331 aaPredicted RBP11.38□□□□□ -0.59
CBWD3-208ENST00000612050 SECISBP2Q96T21 854 aaKnown RBP11.38□□□□□ -0.59
CBWD3-208ENST00000612050 DOHHQ9BU89 302 aa11.38□□□□□ -0.59
CBWD3-208ENST00000612050 TTTY12Q9BZ98 90 aa11.38□□□□□ -0.59
CBWD3-208ENST00000612050 C12orf65Q9H3J6 166 aaKnown RBP11.38□□□□□ -0.59
CBWD3-208ENST00000612050 RUBCNLQ9H714 662 aa11.38□□□□□ -0.59
CBWD3-208ENST00000612050 MYNNQ9NPC7 610 aa11.38□□□□□ -0.59
CBWD3-208ENST00000612050 TAS2R9Q9NYW1 312 aa11.38□□□□□ -0.59
CBWD3-208ENST00000612050 CES1P1Q9UKY3 287 aa11.38□□□□□ -0.59
CBWD3-208ENST00000612050 POLR3HQ9Y535 204 aaPredicted RBP11.38□□□□□ -0.59
CBWD3-208ENST00000612050 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.38□□□□□ -0.59
CBWD3-208ENST00000612050 CROCCQ5TZA2 2017 aa11.38□□□□□ -0.59
CBWD3-208ENST00000612050 WIPF3A6NGB9 483 aa11.37□□□□□ -0.59
CBWD3-208ENST00000612050 FAM166BA8MTA8 275 aa11.37□□□□□ -0.59
CBWD3-208ENST00000612050 G3V3Y1 287 aa11.37□□□□□ -0.59
CBWD3-208ENST00000612050 SNX4O95219 450 aa11.37□□□□□ -0.59
CBWD3-208ENST00000612050 NAGAP17050 411 aa11.37□□□□□ -0.59
CBWD3-208ENST00000612050 PRPH2P23942 346 aa11.37□□□□□ -0.59
CBWD3-208ENST00000612050 GCKP35557 465 aa11.37□□□□□ -0.59
CBWD3-208ENST00000612050 RPL3P39023 403 aaKnown RBP11.37□□□□□ -0.59
CBWD3-208ENST00000612050 ASMTP46597 345 aa11.37□□□□□ -0.59
CBWD3-208ENST00000612050 RAE1P78406 368 aaKnown RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 205.2 ms