RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 OR7G1Q8NGA0 311 aa6.99□□□□□ -1.29
CUX1-219ENST00000606749 OR4F6Q8NGB9 312 aa6.99□□□□□ -1.29
CUX1-219ENST00000606749 SPPL2AQ8TCT8 520 aa6.99□□□□□ -1.29
CUX1-219ENST00000606749 DCAKDQ8WVC6 231 aa6.99□□□□□ -1.29
CUX1-219ENST00000606749 DIO2Q92813 273 aa6.99□□□□□ -1.29
CUX1-219ENST00000606749 TM4SF18Q96CE8 201 aa6.99□□□□□ -1.29
CUX1-219ENST00000606749 NTNG2Q96CW9 530 aa6.99□□□□□ -1.29
CUX1-219ENST00000606749 GNRHR2Q96P88 292 aa6.99□□□□□ -1.29
CUX1-219ENST00000606749 PAFAH2Q99487 392 aa6.99□□□□□ -1.29
CUX1-219ENST00000606749 TIMP4Q99727 224 aa6.99□□□□□ -1.29
CUX1-219ENST00000606749 MRPL57Q9BQC6 102 aaKnown RBP6.99□□□□□ -1.29
CUX1-219ENST00000606749 ZNF559Q9BR84 538 aa6.99□□□□□ -1.29
CUX1-219ENST00000606749 ANGPTL4Q9BY76 406 aa6.99□□□□□ -1.29
CUX1-219ENST00000606749 MRPL1Q9BYD6 325 aaKnown RBP6.99□□□□□ -1.29
CUX1-219ENST00000606749 TSPYL1Q9H0U9 437 aa6.99□□□□□ -1.29
CUX1-219ENST00000606749 SLC6A15Q9H2J7 730 aa6.99□□□□□ -1.29
CUX1-219ENST00000606749 CDC42EP4Q9H3Q1 356 aaKnown RBP6.99□□□□□ -1.29
CUX1-219ENST00000606749 SLC24A3Q9HC58 644 aa6.99□□□□□ -1.29
CUX1-219ENST00000606749 FARSBQ9NSD9 589 aaKnown RBP6.99□□□□□ -1.29
CUX1-219ENST00000606749 MTRF1LQ9UGC7 380 aaKnown RBP6.99□□□□□ -1.29
CUX1-219ENST00000606749 KCNN3Q9UGI6 736 aa6.99□□□□□ -1.29
CUX1-219ENST00000606749 ZNF180Q9UJW8 692 aa6.99□□□□□ -1.29
CUX1-219ENST00000606749 CES1P1Q9UKY3 287 aa6.99□□□□□ -1.29
CUX1-219ENST00000606749 IKBKGQ9Y6K9 419 aa6.99□□□□□ -1.29
CUX1-219ENST00000606749 CELSR1Q9NYQ6 3014 aa6.99□□□□□ -1.29
CUX1-219ENST00000606749 INTS1Q8N201 2190 aaKnown RBP6.99□□□□□ -1.29
CUX1-219ENST00000606749 NCKAP5O14513 1909 aa6.98□□□□□ -1.29
CUX1-219ENST00000606749 HSPB2A8KAH6 182 aa6.98□□□□□ -1.29
CUX1-219ENST00000606749 FAM47E-STBD1D6RA91 191 aa6.98□□□□□ -1.29
CUX1-219ENST00000606749 POC1B-GALNT4F8VUJ3 575 aa6.98□□□□□ -1.29
CUX1-219ENST00000606749 SYT5O00445 386 aa6.98□□□□□ -1.29
CUX1-219ENST00000606749 GUCY1B2O75343 617 aa6.98□□□□□ -1.29
CUX1-219ENST00000606749 TRAPPC6AO75865 159 aa6.98□□□□□ -1.29
CUX1-219ENST00000606749 KRT38O76015 456 aa6.98□□□□□ -1.29
CUX1-219ENST00000606749 EPPINO95925 133 aa6.98□□□□□ -1.29
CUX1-219ENST00000606749 OTCP00480 354 aa6.98□□□□□ -1.29
CUX1-219ENST00000606749 PDYNP01213 254 aa6.98□□□□□ -1.29
CUX1-219ENST00000606749 ABCB1P08183 1280 aaPredicted RBP6.98□□□□□ -1.29
CUX1-219ENST00000606749 CPMP14384 443 aa6.98□□□□□ -1.29
CUX1-219ENST00000606749 TSPAN8P19075 237 aa6.98□□□□□ -1.29
CUX1-219ENST00000606749 NT5EP21589 574 aa6.98□□□□□ -1.29
CUX1-219ENST00000606749 CNTFP26441 200 aa6.98□□□□□ -1.29
CUX1-219ENST00000606749 GDF1P27539 372 aa6.98□□□□□ -1.29
CUX1-219ENST00000606749 SOX18P35713 384 aa6.98□□□□□ -1.29
CUX1-219ENST00000606749 HSD17B3P37058 310 aa6.98□□□□□ -1.29
CUX1-219ENST00000606749 CASP3P42574 277 aa6.98□□□□□ -1.29
CUX1-219ENST00000606749 MAPK12P53778 367 aa6.98□□□□□ -1.29
CUX1-219ENST00000606749 CDH13P55290 713 aa6.98□□□□□ -1.29
CUX1-219ENST00000606749 NRG3P56975 720 aa6.98□□□□□ -1.29
CUX1-219ENST00000606749 MGAT2Q10469 447 aa6.98□□□□□ -1.29
CUX1-219ENST00000606749 GALNT1Q10472 559 aaPredicted RBP6.98□□□□□ -1.29
CUX1-219ENST00000606749 MAP4K2Q12851 820 aa6.98□□□□□ -1.29
CUX1-219ENST00000606749 MYBPHQ13203 477 aa6.98□□□□□ -1.29
CUX1-219ENST00000606749 RPS6KA2Q15349 733 aa6.98□□□□□ -1.29
CUX1-219ENST00000606749 HSPB2Q16082 182 aa6.98□□□□□ -1.29
CUX1-219ENST00000606749 WHAMMP3Q1A5X7 153 aa6.98□□□□□ -1.29
CUX1-219ENST00000606749 PRICKLE4Q2TBC4 344 aa6.98□□□□□ -1.29
CUX1-219ENST00000606749 SLC25A35Q3KQZ1 300 aa6.98□□□□□ -1.29
CUX1-219ENST00000606749 GGTA1PQ4G0N0 100 aa6.98□□□□□ -1.29
CUX1-219ENST00000606749 SLC48A1Q6P1K1 146 aa6.98□□□□□ -1.29
CUX1-219ENST00000606749 LETMD1Q6P1Q0 360 aa6.98□□□□□ -1.29
CUX1-219ENST00000606749 FAM111BQ6SJ93 734 aa6.98□□□□□ -1.29
CUX1-219ENST00000606749 ARSKQ6UWY0 536 aa6.98□□□□□ -1.29
CUX1-219ENST00000606749 COMMD6Q7Z4G1 85 aa6.98□□□□□ -1.29
CUX1-219ENST00000606749 PACS2Q86VP3 889 aa6.98□□□□□ -1.29
CUX1-219ENST00000606749 MMP21Q8N119 569 aa6.98□□□□□ -1.29
CUX1-219ENST00000606749 LIX1Q8N485 282 aa6.98□□□□□ -1.29
CUX1-219ENST00000606749 MYRIPQ8NFW9 859 aa6.98□□□□□ -1.29
CUX1-219ENST00000606749 UHMK1Q8TAS1 419 aaKnown RBP6.98□□□□□ -1.29
CUX1-219ENST00000606749 ZNF483Q8TF39 744 aaPredicted RBP6.98□□□□□ -1.29
CUX1-219ENST00000606749 IFT81Q8WYA0 676 aa6.98□□□□□ -1.29
CUX1-219ENST00000606749 ZNF597Q96LX8 424 aa6.98□□□□□ -1.29
CUX1-219ENST00000606749 RILPQ96NA2 401 aa6.98□□□□□ -1.29
CUX1-219ENST00000606749 SECISBP2Q96T21 854 aaKnown RBP6.98□□□□□ -1.29
CUX1-219ENST00000606749 FMO2Q99518 471 aa6.98□□□□□ -1.29
CUX1-219ENST00000606749 C1QTNF3Q9BXJ4 246 aa6.98□□□□□ -1.29
CUX1-219ENST00000606749 MRPL46Q9H2W6 279 aaKnown RBP6.98□□□□□ -1.29
CUX1-219ENST00000606749 UBQLN3Q9H347 655 aa6.98□□□□□ -1.29
CUX1-219ENST00000606749 ELOVL6Q9H5J4 265 aa6.98□□□□□ -1.29
CUX1-219ENST00000606749 BRF2Q9HAW0 419 aa6.98□□□□□ -1.29
CUX1-219ENST00000606749 XPR1Q9UBH6 696 aa6.98□□□□□ -1.29
CUX1-219ENST00000606749 B4GALT7Q9UBV7 327 aa6.98□□□□□ -1.29
CUX1-219ENST00000606749 ZNF639Q9UID6 485 aa6.98□□□□□ -1.29
CUX1-219ENST00000606749 ZNF225Q9UK10 706 aa6.98□□□□□ -1.29
CUX1-219ENST00000606749 SNX6Q9UNH7 406 aa6.98□□□□□ -1.29
CUX1-219ENST00000606749 SLC12A4Q9UP95 1085 aa6.98□□□□□ -1.29
CUX1-219ENST00000606749 L3MBTL1Q9Y468 752 aa6.98□□□□□ -1.29
CUX1-219ENST00000606749 PCDHA9Q9Y5H5 950 aa6.98□□□□□ -1.29
CUX1-219ENST00000606749 FREM3P0C091 2139 aa6.97□□□□□ -1.29
CUX1-219ENST00000606749 A0A087WUV0 522 aaPredicted RBP6.97□□□□□ -1.29
CUX1-219ENST00000606749 C15orf38-AP3S2A0A0A6YYH1 394 aa6.97□□□□□ -1.29
CUX1-219ENST00000606749 C1orf226A1L170 272 aa6.97□□□□□ -1.29
CUX1-219ENST00000606749 A8MT66 165 aa6.97□□□□□ -1.29
CUX1-219ENST00000606749 KDM4EB2RXH2 506 aaPredicted RBP6.97□□□□□ -1.29
CUX1-219ENST00000606749 TRIM49D1C9J1S8 452 aa6.97□□□□□ -1.29
CUX1-219ENST00000606749 ERAL1O75616 437 aaKnown RBP6.97□□□□□ -1.29
CUX1-219ENST00000606749 ATP1B1P05026 303 aa6.97□□□□□ -1.29
CUX1-219ENST00000606749 HPNP05981 417 aa6.97□□□□□ -1.29
CUX1-219ENST00000606749 RPS17P08708 135 aaKnown RBP6.97□□□□□ -1.29
CUX1-219ENST00000606749 SNRPAP09012 282 aaKnown RBP6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms