RNA–Protein interactions for RNA: ENST00000605847.5

NEDD8-MDP1-204, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 758 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-204ENST00000605847 PTBP2Q9UKA9 531 aaKnown RBP13.96□□□□□ -0.17
NEDD8-MDP1-204ENST00000605847 OARD1Q9Y530 152 aa13.96□□□□□ -0.17
NEDD8-MDP1-204ENST00000605847 NCF1BA6NI72 391 aaPredicted RBP13.95□□□□□ -0.18
NEDD8-MDP1-204ENST00000605847 NCF1CA8MVU1 366 aaPredicted RBP13.95□□□□□ -0.18
NEDD8-MDP1-204ENST00000605847 SH3BGRLO75368 114 aa13.95□□□□□ -0.18
NEDD8-MDP1-204ENST00000605847 KRT14P02533 472 aa13.95□□□□□ -0.18
NEDD8-MDP1-204ENST00000605847 NCF1P14598 390 aaPredicted RBP13.95□□□□□ -0.18
NEDD8-MDP1-204ENST00000605847 BUD31P41223 144 aaPredicted RBP13.95□□□□□ -0.18
NEDD8-MDP1-204ENST00000605847 SLC6A12P48065 614 aa13.95□□□□□ -0.18
NEDD8-MDP1-204ENST00000605847 RPS13P62277 151 aaKnown RBP13.95□□□□□ -0.18
NEDD8-MDP1-204ENST00000605847 OCRLQ01968 901 aa13.95□□□□□ -0.18
NEDD8-MDP1-204ENST00000605847 SLAMF1Q13291 335 aa13.95□□□□□ -0.18
NEDD8-MDP1-204ENST00000605847 LAPTM5Q13571 262 aa13.95□□□□□ -0.18
NEDD8-MDP1-204ENST00000605847 TMEM35AQ53FP2 167 aa13.95□□□□□ -0.18
NEDD8-MDP1-204ENST00000605847 BEX5Q5H9J7 111 aa13.95□□□□□ -0.18
NEDD8-MDP1-204ENST00000605847 PAGE2BQ5JRK9 111 aa13.95□□□□□ -0.18
NEDD8-MDP1-204ENST00000605847 VWA1Q6PCB0 445 aa13.95□□□□□ -0.18
NEDD8-MDP1-204ENST00000605847 ZNF474Q6S9Z5 364 aaPredicted RBP13.95□□□□□ -0.18
NEDD8-MDP1-204ENST00000605847 ZNF704Q6ZNC4 412 aaPredicted RBP13.95□□□□□ -0.18
NEDD8-MDP1-204ENST00000605847 UBE3DQ7Z6J8 389 aa13.95□□□□□ -0.18
NEDD8-MDP1-204ENST00000605847 NKAPQ8N5F7 415 aaKnown RBP13.95□□□□□ -0.18
NEDD8-MDP1-204ENST00000605847 RNF10Q8N5U6 811 aaKnown RBP13.95□□□□□ -0.18
NEDD8-MDP1-204ENST00000605847 RHBDF1Q96CC6 855 aa13.95□□□□□ -0.18
NEDD8-MDP1-204ENST00000605847 MARK4Q96L34 752 aa13.95□□□□□ -0.18
NEDD8-MDP1-204ENST00000605847 SIGLEC10Q96LC7 697 aa13.95□□□□□ -0.18
NEDD8-MDP1-204ENST00000605847 EFCAB11Q9BUY7 163 aa13.95□□□□□ -0.18
NEDD8-MDP1-204ENST00000605847 DNAJC11Q9NVH1 559 aa13.95□□□□□ -0.18
NEDD8-MDP1-204ENST00000605847 WWOXQ9NZC7 414 aa13.95□□□□□ -0.18
NEDD8-MDP1-204ENST00000605847 PHF11Q9UIL8 331 aa13.95□□□□□ -0.18
NEDD8-MDP1-204ENST00000605847 ZNF490Q9ULM2 529 aaPredicted RBP13.95□□□□□ -0.18
NEDD8-MDP1-204ENST00000605847 CORO1CQ9ULV4 474 aaPredicted RBP13.95□□□□□ -0.18
NEDD8-MDP1-204ENST00000605847 LAMP3Q9UQV4 416 aa13.95□□□□□ -0.18
NEDD8-MDP1-204ENST00000605847 NINQ8N4C6 2090 aa13.95□□□□□ -0.18
NEDD8-MDP1-204ENST00000605847 DSCAMO60469 2012 aa13.95□□□□□ -0.18
NEDD8-MDP1-204ENST00000605847 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.94□□□□□ -0.18
NEDD8-MDP1-204ENST00000605847 CBR3O75828 277 aa13.94□□□□□ -0.18
NEDD8-MDP1-204ENST00000605847 TTC4O95801 387 aa13.94□□□□□ -0.18
NEDD8-MDP1-204ENST00000605847 TGM6O95932 706 aa13.94□□□□□ -0.18
NEDD8-MDP1-204ENST00000605847 ZNF37AP17032 561 aaPredicted RBP13.94□□□□□ -0.18
NEDD8-MDP1-204ENST00000605847 LOXP28300 417 aaPredicted RBP13.94□□□□□ -0.18
NEDD8-MDP1-204ENST00000605847 CCKARP32238 428 aa13.94□□□□□ -0.18
NEDD8-MDP1-204ENST00000605847 MAGEA3P43357 314 aa13.94□□□□□ -0.18
NEDD8-MDP1-204ENST00000605847 STARP49675 285 aa13.94□□□□□ -0.18
NEDD8-MDP1-204ENST00000605847 RPS4XP62701 263 aaKnown RBP13.94□□□□□ -0.18
NEDD8-MDP1-204ENST00000605847 SIRPAP78324 504 aa13.94□□□□□ -0.18
NEDD8-MDP1-204ENST00000605847 DOC2AQ14183 400 aa13.94□□□□□ -0.18
NEDD8-MDP1-204ENST00000605847 KRTAP24-1Q3LI83 254 aa13.94□□□□□ -0.18
NEDD8-MDP1-204ENST00000605847 ANKRD34AQ69YU3 496 aa13.94□□□□□ -0.18
NEDD8-MDP1-204ENST00000605847 SLC30A6Q6NXT4 461 aa13.94□□□□□ -0.18
NEDD8-MDP1-204ENST00000605847 GALNT7Q86SF2 657 aa13.94□□□□□ -0.18
NEDD8-MDP1-204ENST00000605847 ADAMTSL2Q86TH1 951 aa13.94□□□□□ -0.18
NEDD8-MDP1-204ENST00000605847 GPR180Q86V85 440 aa13.94□□□□□ -0.18
NEDD8-MDP1-204ENST00000605847 CNTN4Q8IWV2 1026 aa13.94□□□□□ -0.18
NEDD8-MDP1-204ENST00000605847 PRR22Q8IZ63 422 aa13.94□□□□□ -0.18
NEDD8-MDP1-204ENST00000605847 AGGF1Q8N302 714 aaeCLIP13.94□□□□□ -0.18
NEDD8-MDP1-204ENST00000605847 ZNF611Q8N823 705 aa13.94□□□□□ -0.18
NEDD8-MDP1-204ENST00000605847 SNX31Q8N9S9 440 aa13.94□□□□□ -0.18
NEDD8-MDP1-204ENST00000605847 CAVIN3Q969G5 261 aa13.94□□□□□ -0.18
NEDD8-MDP1-204ENST00000605847 ZNF845Q96IR2 970 aaPredicted RBP13.94□□□□□ -0.18
NEDD8-MDP1-204ENST00000605847 DESI2Q9BSY9 194 aa13.94□□□□□ -0.18
NEDD8-MDP1-204ENST00000605847 G6PC3Q9BUM1 346 aa13.94□□□□□ -0.18
NEDD8-MDP1-204ENST00000605847 OSBPL11Q9BXB4 747 aa13.94□□□□□ -0.18
NEDD8-MDP1-204ENST00000605847 MS4A8Q9BY19 250 aa13.94□□□□□ -0.18
NEDD8-MDP1-204ENST00000605847 KLHL4Q9C0H6 718 aa13.94□□□□□ -0.18
NEDD8-MDP1-204ENST00000605847 TSPY26PQ9H489 355 aa13.94□□□□□ -0.18
NEDD8-MDP1-204ENST00000605847 CNOT10Q9H9A5 744 aaKnown RBP13.94□□□□□ -0.18
NEDD8-MDP1-204ENST00000605847 SERHLQ9NQF3 203 aa13.94□□□□□ -0.18
NEDD8-MDP1-204ENST00000605847 KLRF1Q9NZS2 232 aa13.94□□□□□ -0.18
NEDD8-MDP1-204ENST00000605847 CTNNAL1Q9UBT7 734 aa13.94□□□□□ -0.18
NEDD8-MDP1-204ENST00000605847 CDC42EP3Q9UKI2 254 aa13.94□□□□□ -0.18
NEDD8-MDP1-204ENST00000605847 DLGAP4Q9Y2H0 992 aa13.94□□□□□ -0.18
NEDD8-MDP1-204ENST00000605847 FREM3P0C091 2139 aa13.93□□□□□ -0.18
NEDD8-MDP1-204ENST00000605847 UQCRHLA0A096LP55 91 aa13.93□□□□□ -0.18
NEDD8-MDP1-204ENST00000605847 C2orf72A6NCS6 295 aa13.93□□□□□ -0.18
NEDD8-MDP1-204ENST00000605847 SAP18O00422 153 aaKnown RBP13.93□□□□□ -0.18
NEDD8-MDP1-204ENST00000605847 HS3ST1O14792 307 aa13.93□□□□□ -0.18
NEDD8-MDP1-204ENST00000605847 SCELO95171 688 aa13.93□□□□□ -0.18
NEDD8-MDP1-204ENST00000605847 TGFB1P01137 390 aa13.93□□□□□ -0.18
NEDD8-MDP1-204ENST00000605847 PCNAP12004 261 aa13.93□□□□□ -0.18
NEDD8-MDP1-204ENST00000605847 TNFRSF17Q02223 184 aa13.93□□□□□ -0.18
NEDD8-MDP1-204ENST00000605847 C18orf63Q68DL7 685 aa13.93□□□□□ -0.18
NEDD8-MDP1-204ENST00000605847 OR4C11Q6IEV9 310 aa13.93□□□□□ -0.18
NEDD8-MDP1-204ENST00000605847 SH2D5Q6ZV89 423 aa13.93□□□□□ -0.18
NEDD8-MDP1-204ENST00000605847 GTPBP3Q969Y2 492 aaKnown RBP13.93□□□□□ -0.18
NEDD8-MDP1-204ENST00000605847 CTHRC1Q96CG8 243 aa13.93□□□□□ -0.18
NEDD8-MDP1-204ENST00000605847 REPS1Q96D71 796 aa13.93□□□□□ -0.18
NEDD8-MDP1-204ENST00000605847 DTNBP1Q96EV8 351 aa13.93□□□□□ -0.18
NEDD8-MDP1-204ENST00000605847 CENPKQ9BS16 269 aa13.93□□□□□ -0.18
NEDD8-MDP1-204ENST00000605847 OR2B2Q9GZK3 357 aa13.93□□□□□ -0.18
NEDD8-MDP1-204ENST00000605847 TAS2R10Q9NYW0 307 aa13.93□□□□□ -0.18
NEDD8-MDP1-204ENST00000605847 RNF112Q9ULX5 631 aa13.93□□□□□ -0.18
NEDD8-MDP1-204ENST00000605847 EXO1Q9UQ84 846 aaKnown RBP13.93□□□□□ -0.18
NEDD8-MDP1-204ENST00000605847 RAI1Q7Z5J4 1906 aaPredicted RBP13.92□□□□□ -0.18
NEDD8-MDP1-204ENST00000605847 LRRC14BA6NHZ5 514 aa13.92□□□□□ -0.18
NEDD8-MDP1-204ENST00000605847 SLC22A20A6NK97 555 aa13.92□□□□□ -0.18
NEDD8-MDP1-204ENST00000605847 ABCB7O75027 752 aa13.92□□□□□ -0.18
NEDD8-MDP1-204ENST00000605847 ICOSLGO75144 302 aa13.92□□□□□ -0.18
NEDD8-MDP1-204ENST00000605847 PRKRAO75569 313 aaKnown RBP13.92□□□□□ -0.18
NEDD8-MDP1-204ENST00000605847 GPR75O95800 540 aa13.92□□□□□ -0.18
NEDD8-MDP1-204ENST00000605847 CLPSP04118 112 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms