RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 STRADBQ9C0K7 418 aa16.86■□□□□ 0.29
VRK3-225ENST00000601912 OR51I1Q9H343 314 aa16.86■□□□□ 0.29
VRK3-225ENST00000601912 DCAF13Q9NV06 445 aaKnown RBP16.86■□□□□ 0.29
VRK3-225ENST00000601912 C6orf203Q9P0P8 240 aaPredicted RBP16.86■□□□□ 0.29
VRK3-225ENST00000601912 ANGPT4Q9Y264 503 aa16.86■□□□□ 0.29
VRK3-225ENST00000601912 SEC16AO15027 2179 aa16.86■□□□□ 0.29
VRK3-225ENST00000601912 C5orf58C9J3I9 102 aa16.85■□□□□ 0.29
VRK3-225ENST00000601912 PLOD3O60568 738 aa16.85■□□□□ 0.29
VRK3-225ENST00000601912 SERPINA1P01009 418 aa16.85■□□□□ 0.29
VRK3-225ENST00000601912 ARAFP10398 606 aa16.85■□□□□ 0.29
VRK3-225ENST00000601912 PDX1P52945 283 aa16.85■□□□□ 0.29
VRK3-225ENST00000601912 MC2RQ01718 297 aa16.85■□□□□ 0.29
VRK3-225ENST00000601912 PRICKLE4Q2TBC4 344 aa16.85■□□□□ 0.29
VRK3-225ENST00000601912 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.85■□□□□ 0.29
VRK3-225ENST00000601912 FAM98BQ52LJ0 330 aaKnown RBP16.85■□□□□ 0.29
VRK3-225ENST00000601912 LRRC23Q53EV4 343 aaPredicted RBP16.85■□□□□ 0.29
VRK3-225ENST00000601912 TBCELQ5QJ74 424 aa16.85■□□□□ 0.29
VRK3-225ENST00000601912 MFSD4BQ5TF39 518 aa16.85■□□□□ 0.29
VRK3-225ENST00000601912 ADGRG5Q8IZF4 528 aa16.85■□□□□ 0.29
VRK3-225ENST00000601912 MIPOL1Q8TD10 442 aa16.85■□□□□ 0.29
VRK3-225ENST00000601912 PPWD1Q96BP3 646 aaKnown RBP16.85■□□□□ 0.29
VRK3-225ENST00000601912 A4GALTQ9NPC4 353 aa16.85■□□□□ 0.29
VRK3-225ENST00000601912 FBXO8Q9NRD0 319 aa16.85■□□□□ 0.29
VRK3-225ENST00000601912 LANCL2Q9NS86 450 aa16.85■□□□□ 0.29
VRK3-225ENST00000601912 OLAHQ9NV23 265 aa16.85■□□□□ 0.29
VRK3-225ENST00000601912 ARMC1Q9NVT9 282 aa16.85■□□□□ 0.29
VRK3-225ENST00000601912 RPS6KA6Q9UK32 745 aa16.85■□□□□ 0.29
VRK3-225ENST00000601912 C19orf53Q9UNZ5 99 aaPredicted RBP16.85■□□□□ 0.29
VRK3-225ENST00000601912 SAMD4AQ9UPU9 718 aaKnown RBP16.85■□□□□ 0.29
VRK3-225ENST00000601912 PCDHGA1Q9Y5H4 931 aa16.85■□□□□ 0.29
VRK3-225ENST00000601912 HMGN4O00479 90 aa16.85■□□□□ 0.29
VRK3-225ENST00000601912 JRKO75564 520 aa16.85■□□□□ 0.29
VRK3-225ENST00000601912 TIAF1O95411 115 aa16.85■□□□□ 0.29
VRK3-225ENST00000601912 HOXB6P17509 224 aaKnown RBP16.85■□□□□ 0.29
VRK3-225ENST00000601912 MAOAP21397 527 aa16.85■□□□□ 0.29
VRK3-225ENST00000601912 MINDY4Q4G0A6 757 aa16.85■□□□□ 0.29
VRK3-225ENST00000601912 QSOX2Q6ZRP7 698 aa16.85■□□□□ 0.29
VRK3-225ENST00000601912 GALNT12Q8IXK2 581 aa16.85■□□□□ 0.29
VRK3-225ENST00000601912 PQLC1Q8N2U9 271 aa16.85■□□□□ 0.29
VRK3-225ENST00000601912 BMPERQ8N8U9 685 aa16.85■□□□□ 0.29
VRK3-225ENST00000601912 NFKBIDQ8NI38 313 aa16.85■□□□□ 0.29
VRK3-225ENST00000601912 FBXO30Q8TB52 745 aa16.85■□□□□ 0.29
VRK3-225ENST00000601912 XAGE5Q8WWM1 108 aa16.85■□□□□ 0.29
VRK3-225ENST00000601912 RIT1Q92963 219 aa16.85■□□□□ 0.29
VRK3-225ENST00000601912 SLCO4A1Q96BD0 722 aa16.85■□□□□ 0.29
VRK3-225ENST00000601912 PTCHD1Q96NR3 888 aa16.85■□□□□ 0.29
VRK3-225ENST00000601912 ACTRT3Q9BYD9 372 aa16.85■□□□□ 0.29
VRK3-225ENST00000601912 APMAPQ9HDC9 416 aa16.85■□□□□ 0.29
VRK3-225ENST00000601912 EQTNQ9NQ60 294 aa16.85■□□□□ 0.29
VRK3-225ENST00000601912 MAT2BQ9NZL9 334 aa16.85■□□□□ 0.29
VRK3-225ENST00000601912 P2RX2Q9UBL9 471 aa16.85■□□□□ 0.29
VRK3-225ENST00000601912 V9GYQ6 96 aa16.85■□□□□ 0.29
VRK3-225ENST00000601912 OTOGLQ3ZCN5 2332 aa16.84■□□□□ 0.29
VRK3-225ENST00000601912 WDR87Q6ZQQ6 2873 aa16.84■□□□□ 0.29
VRK3-225ENST00000601912 DUXAA6NLW8 204 aa16.84■□□□□ 0.29
VRK3-225ENST00000601912 HNRNPRO43390 633 aaKnown RBP16.84■□□□□ 0.29
VRK3-225ENST00000601912 OR12D1P0DN82 309 aa16.84■□□□□ 0.29
VRK3-225ENST00000601912 TGM1P22735 817 aa16.84■□□□□ 0.29
VRK3-225ENST00000601912 STT3AP46977 705 aa16.84■□□□□ 0.29
VRK3-225ENST00000601912 DCDP81605 110 aaKnown RBP16.84■□□□□ 0.29
VRK3-225ENST00000601912 EEF1A2Q05639 463 aaKnown RBP16.84■□□□□ 0.29
VRK3-225ENST00000601912 CHRNB3Q05901 458 aa16.84■□□□□ 0.29
VRK3-225ENST00000601912 MAP4K2Q12851 820 aa16.84■□□□□ 0.29
VRK3-225ENST00000601912 GNA13Q14344 377 aa16.84■□□□□ 0.29
VRK3-225ENST00000601912 TRMT12Q53H54 448 aaKnown RBP16.84■□□□□ 0.29
VRK3-225ENST00000601912 REEP3Q6NUK4 255 aa16.84■□□□□ 0.29
VRK3-225ENST00000601912 FAM111BQ6SJ93 734 aa16.84■□□□□ 0.29
VRK3-225ENST00000601912 VWA5B2Q8N398 1253 aa16.84■□□□□ 0.29
VRK3-225ENST00000601912 METTL25Q8N6Q8 603 aa16.84■□□□□ 0.29
VRK3-225ENST00000601912 RAB8BQ92930 207 aa16.84■□□□□ 0.29
VRK3-225ENST00000601912 SEPHS2Q99611 448 aa16.84■□□□□ 0.29
VRK3-225ENST00000601912 CTRCQ99895 268 aa16.84■□□□□ 0.29
VRK3-225ENST00000601912 YIPF4Q9BSR8 244 aa16.84■□□□□ 0.29
VRK3-225ENST00000601912 SERHL2Q9H4I8 314 aa16.84■□□□□ 0.29
VRK3-225ENST00000601912 ANKRA2Q9H9E1 313 aa16.84■□□□□ 0.29
VRK3-225ENST00000601912 CXorf21Q9HAI6 301 aa16.84■□□□□ 0.29
VRK3-225ENST00000601912 ZNF451Q9Y4E5 1061 aa16.84■□□□□ 0.29
VRK3-225ENST00000601912 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.83■□□□□ 0.28
VRK3-225ENST00000601912 B4E171 279 aa16.83■□□□□ 0.28
VRK3-225ENST00000601912 ASNA1O43681 348 aa16.83■□□□□ 0.28
VRK3-225ENST00000601912 CPNE3O75131 537 aaKnown RBP16.83■□□□□ 0.28
VRK3-225ENST00000601912 IFNA14P01570 189 aa16.83■□□□□ 0.28
VRK3-225ENST00000601912 IFNA16P05015 189 aa16.83■□□□□ 0.28
VRK3-225ENST00000601912 GALNSP34059 522 aa16.83■□□□□ 0.28
VRK3-225ENST00000601912 TSPAN7P41732 249 aa16.83■□□□□ 0.28
VRK3-225ENST00000601912 INSM1Q01101 510 aaPredicted RBP16.83■□□□□ 0.28
VRK3-225ENST00000601912 OCA2Q04671 838 aa16.83■□□□□ 0.28
VRK3-225ENST00000601912 NKAIN1Q4KMZ8 207 aa16.83■□□□□ 0.28
VRK3-225ENST00000601912 VWA2Q5GFL6 755 aa16.83■□□□□ 0.28
VRK3-225ENST00000601912 FHL5Q5TD97 284 aa16.83■□□□□ 0.28
VRK3-225ENST00000601912 STPG1Q5TH74 334 aa16.83■□□□□ 0.28
VRK3-225ENST00000601912 LGI4Q8N135 537 aa16.83■□□□□ 0.28
VRK3-225ENST00000601912 SLC38A9Q8NBW4 561 aa16.83■□□□□ 0.28
VRK3-225ENST00000601912 OR5D16Q8NGK9 328 aa16.83■□□□□ 0.28
VRK3-225ENST00000601912 SLC38A5Q8WUX1 472 aa16.83■□□□□ 0.28
VRK3-225ENST00000601912 CTHRC1Q96CG8 243 aa16.83■□□□□ 0.28
VRK3-225ENST00000601912 GIMAP5Q96F15 307 aa16.83■□□□□ 0.28
VRK3-225ENST00000601912 C16orf58Q96GQ5 468 aa16.83■□□□□ 0.28
VRK3-225ENST00000601912 RNF145Q96MT1 663 aa16.83■□□□□ 0.28
VRK3-225ENST00000601912 ZNF578Q96N58 590 aaPredicted RBP16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms