RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 FAM120CQ9NX05 1096 aaKnown RBP18.63■□□□□ 0.57
SHKBP1-222ENST00000600320 KCNMB2Q9Y691 235 aa18.63■□□□□ 0.57
SHKBP1-222ENST00000600320 MED13Q9UHV7 2174 aa18.63■□□□□ 0.57
SHKBP1-222ENST00000600320 PTPRQQ9UMZ3 2332 aa18.62■□□□□ 0.57
SHKBP1-222ENST00000600320 PRKNO60260 465 aaPredicted RBP18.62■□□□□ 0.57
SHKBP1-222ENST00000600320 NME6O75414 186 aaPredicted RBP18.62■□□□□ 0.57
SHKBP1-222ENST00000600320 DNAJB5O75953 348 aa18.62■□□□□ 0.57
SHKBP1-222ENST00000600320 CPSF4O95639 269 aaKnown RBP18.62■□□□□ 0.57
SHKBP1-222ENST00000600320 SERPINA7P05543 415 aa18.62■□□□□ 0.57
SHKBP1-222ENST00000600320 ABCB1P08183 1280 aaPredicted RBP18.62■□□□□ 0.57
SHKBP1-222ENST00000600320 ITGAMP11215 1152 aa18.62■□□□□ 0.57
SHKBP1-222ENST00000600320 KCNK10P57789 538 aa18.62■□□□□ 0.57
SHKBP1-222ENST00000600320 HBA1P69905 142 aa18.62■□□□□ 0.57
SHKBP1-222ENST00000600320 VPS26BQ4G0F5 336 aa18.62■□□□□ 0.57
SHKBP1-222ENST00000600320 GKAP1Q5VSY0 366 aaPredicted RBP18.62■□□□□ 0.57
SHKBP1-222ENST00000600320 ANXA8L1Q5VT79 327 aa18.62■□□□□ 0.57
SHKBP1-222ENST00000600320 ZNF615Q8N8J6 731 aa18.62■□□□□ 0.57
SHKBP1-222ENST00000600320 BCAS4Q8TDM0 211 aa18.62■□□□□ 0.57
SHKBP1-222ENST00000600320 ELP5Q8TE02 316 aa18.62■□□□□ 0.57
SHKBP1-222ENST00000600320 VMP1Q96GC9 406 aa18.62■□□□□ 0.57
SHKBP1-222ENST00000600320 SEMA4CQ9C0C4 833 aa18.62■□□□□ 0.57
SHKBP1-222ENST00000600320 ING2Q9H160 280 aa18.62■□□□□ 0.57
SHKBP1-222ENST00000600320 CXorf36Q9H7Y0 433 aa18.62■□□□□ 0.57
SHKBP1-222ENST00000600320 MMP25Q9NPA2 562 aa18.62■□□□□ 0.57
SHKBP1-222ENST00000600320 ATP13A2Q9NQ11 1180 aa18.62■□□□□ 0.57
SHKBP1-222ENST00000600320 BTNL2Q9UIR0 455 aa18.62■□□□□ 0.57
SHKBP1-222ENST00000600320 TRBV11-1A0A0K0K1C0 115 aa18.61■□□□□ 0.57
SHKBP1-222ENST00000600320 PRSS51A0A1B0GVH4 220 aa18.61■□□□□ 0.57
SHKBP1-222ENST00000600320 PLOD2O00469 737 aa18.61■□□□□ 0.57
SHKBP1-222ENST00000600320 NDUFAB1O14561 156 aa18.61■□□□□ 0.57
SHKBP1-222ENST00000600320 CFLARO15519 480 aa18.61■□□□□ 0.57
SHKBP1-222ENST00000600320 DYRK3O43781 588 aa18.61■□□□□ 0.57
SHKBP1-222ENST00000600320 GPC1P35052 558 aa18.61■□□□□ 0.57
SHKBP1-222ENST00000600320 CDKN2CP42773 168 aa18.61■□□□□ 0.57
SHKBP1-222ENST00000600320 RRADP55042 308 aa18.61■□□□□ 0.57
SHKBP1-222ENST00000600320 AIMP2Q13155 320 aaKnown RBP18.61■□□□□ 0.57
SHKBP1-222ENST00000600320 TLR1Q15399 786 aa18.61■□□□□ 0.57
SHKBP1-222ENST00000600320 C6orf163Q5TEZ5 329 aa18.61■□□□□ 0.57
SHKBP1-222ENST00000600320 SLC2A7Q6PXP3 512 aa18.61■□□□□ 0.57
SHKBP1-222ENST00000600320 C19orf48Q6RUI8 117 aa18.61■□□□□ 0.57
SHKBP1-222ENST00000600320 TREML1Q86YW5 311 aa18.61■□□□□ 0.57
SHKBP1-222ENST00000600320 CCDC197Q8NCU1 140 aa18.61■□□□□ 0.57
SHKBP1-222ENST00000600320 OR52R1Q8NGF1 315 aa18.61■□□□□ 0.57
SHKBP1-222ENST00000600320 THOC3Q96J01 351 aaKnown RBP18.61■□□□□ 0.57
SHKBP1-222ENST00000600320 MAGED4Q96JG8 741 aa18.61■□□□□ 0.57
SHKBP1-222ENST00000600320 ART5Q96L15 291 aa18.61■□□□□ 0.57
SHKBP1-222ENST00000600320 CCDC115Q96NT0 180 aa18.61■□□□□ 0.57
SHKBP1-222ENST00000600320 CCDC106Q9BWC9 280 aa18.61■□□□□ 0.57
SHKBP1-222ENST00000600320 SERHLQ9NQF3 203 aa18.61■□□□□ 0.57
SHKBP1-222ENST00000600320 CAPN7Q9Y6W3 813 aa18.61■□□□□ 0.57
SHKBP1-222ENST00000600320 CELSR3Q9NYQ7 3312 aa18.6■□□□□ 0.57
SHKBP1-222ENST00000600320 CCDC154A6NI56 674 aa18.6■□□□□ 0.57
SHKBP1-222ENST00000600320 UPK1AO00322 258 aa18.6■□□□□ 0.57
SHKBP1-222ENST00000600320 PLOD3O60568 738 aa18.6■□□□□ 0.57
SHKBP1-222ENST00000600320 ADSLP30566 484 aaPredicted RBP18.6■□□□□ 0.57
SHKBP1-222ENST00000600320 CLCN2P51788 898 aa18.6■□□□□ 0.57
SHKBP1-222ENST00000600320 SLC37A1P57057 533 aa18.6■□□□□ 0.57
SHKBP1-222ENST00000600320 RNF111Q6ZNA4 994 aa18.6■□□□□ 0.57
SHKBP1-222ENST00000600320 MSANTD1Q6ZTZ1 278 aa18.6■□□□□ 0.57
SHKBP1-222ENST00000600320 APLFQ8IW19 511 aaPredicted RBP18.6■□□□□ 0.57
SHKBP1-222ENST00000600320 C9orf40Q8IXQ3 194 aa18.6■□□□□ 0.57
SHKBP1-222ENST00000600320 KBTBD2Q8IY47 623 aa18.6■□□□□ 0.57
SHKBP1-222ENST00000600320 CLEC4FQ8N1N0 589 aa18.6■□□□□ 0.57
SHKBP1-222ENST00000600320 ANKS4BQ8N8V4 417 aa18.6■□□□□ 0.57
SHKBP1-222ENST00000600320 OR4A15Q8NGL6 344 aa18.6■□□□□ 0.57
SHKBP1-222ENST00000600320 PSMA8Q8TAA3 256 aa18.6■□□□□ 0.57
SHKBP1-222ENST00000600320 PSMF1Q92530 271 aa18.6■□□□□ 0.57
SHKBP1-222ENST00000600320 OR10A5Q9H207 317 aa18.6■□□□□ 0.57
SHKBP1-222ENST00000600320 PRORYQ9H606 182 aa18.6■□□□□ 0.57
SHKBP1-222ENST00000600320 BCAP29Q9UHQ4 241 aa18.6■□□□□ 0.57
SHKBP1-222ENST00000600320 A0A087WV62 115 aa18.59■□□□□ 0.57
SHKBP1-222ENST00000600320 SLITRK5O94991 958 aa18.59■□□□□ 0.57
SHKBP1-222ENST00000600320 SNRPB2P08579 225 aaKnown RBP18.59■□□□□ 0.57
SHKBP1-222ENST00000600320 IFI6P09912 130 aa18.59■□□□□ 0.57
SHKBP1-222ENST00000600320 ICAM2P13598 275 aa18.59■□□□□ 0.57
SHKBP1-222ENST00000600320 ITGA3P26006 1051 aa18.59■□□□□ 0.57
SHKBP1-222ENST00000600320 CCL11P51671 97 aa18.59■□□□□ 0.57
SHKBP1-222ENST00000600320 GAB1Q13480 694 aa18.59■□□□□ 0.57
SHKBP1-222ENST00000600320 TBR1Q16650 682 aa18.59■□□□□ 0.57
SHKBP1-222ENST00000600320 PAGE3Q5JUK9 113 aa18.59■□□□□ 0.57
SHKBP1-222ENST00000600320 OR2L13Q8N349 312 aa18.59■□□□□ 0.57
SHKBP1-222ENST00000600320 CLEC1AQ8NC01 280 aa18.59■□□□□ 0.57
SHKBP1-222ENST00000600320 VPS37AQ8NEZ2 397 aa18.59■□□□□ 0.57
SHKBP1-222ENST00000600320 OR7G1Q8NGA0 311 aa18.59■□□□□ 0.57
SHKBP1-222ENST00000600320 BRIX1Q8TDN6 353 aaKnown RBP18.59■□□□□ 0.57
SHKBP1-222ENST00000600320 FAM120BQ96EK7 910 aaKnown RBP18.59■□□□□ 0.57
SHKBP1-222ENST00000600320 TAS2R9Q9NYW1 312 aa18.59■□□□□ 0.57
SHKBP1-222ENST00000600320 COPS7AQ9UBW8 275 aa18.59■□□□□ 0.57
SHKBP1-222ENST00000600320 C19orf53Q9UNZ5 99 aaPredicted RBP18.59■□□□□ 0.57
SHKBP1-222ENST00000600320 DTX4Q9Y2E6 619 aa18.59■□□□□ 0.57
SHKBP1-222ENST00000600320 SNX8Q9Y5X2 465 aa18.59■□□□□ 0.57
SHKBP1-222ENST00000600320 NUP214P35658 2090 aaPredicted RBP18.59■□□□□ 0.57
SHKBP1-222ENST00000600320 DOCK10Q96BY6 2186 aa18.58■□□□□ 0.57
SHKBP1-222ENST00000600320 A0A1W2PP18 115 aa18.58■□□□□ 0.56
SHKBP1-222ENST00000600320 A6NL46 340 aa18.58■□□□□ 0.56
SHKBP1-222ENST00000600320 SLC22A2O15244 555 aa18.58■□□□□ 0.56
SHKBP1-222ENST00000600320 PSMG1O95456 288 aa18.58■□□□□ 0.56
SHKBP1-222ENST00000600320 C1QCP02747 245 aa18.58■□□□□ 0.56
SHKBP1-222ENST00000600320 GSNP06396 782 aa18.58■□□□□ 0.56
SHKBP1-222ENST00000600320 SOAT1P35610 550 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms