RNA–Protein interactions for RNA: ENST00000600289.6

LSM4-206, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 1,113 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-206ENST00000600289 ZNF675Q8TD23 568 aa14.98□□□□□ -0.01
LSM4-206ENST00000600289 TWIST2Q8WVJ9 160 aa14.98□□□□□ -0.01
LSM4-206ENST00000600289 ASB15Q8WXK1 588 aa14.98□□□□□ -0.01
LSM4-206ENST00000600289 TMEM125Q96AQ2 219 aa14.98□□□□□ -0.01
LSM4-206ENST00000600289 CTHRC1Q96CG8 243 aa14.98□□□□□ -0.01
LSM4-206ENST00000600289 ZNF764Q96H86 408 aaPredicted RBP14.98□□□□□ -0.01
LSM4-206ENST00000600289 CCT7Q99832 543 aa14.98□□□□□ -0.01
LSM4-206ENST00000600289 EBPLQ9BY08 206 aa14.98□□□□□ -0.01
LSM4-206ENST00000600289 OLAHQ9NV23 265 aa14.98□□□□□ -0.01
LSM4-206ENST00000600289 C1orf109Q9NX04 203 aa14.98□□□□□ -0.01
LSM4-206ENST00000600289 TAS2R7Q9NYW3 318 aa14.98□□□□□ -0.01
LSM4-206ENST00000600289 MAP10Q9P2G4 905 aa14.98□□□□□ -0.01
LSM4-206ENST00000600289 ZNF639Q9UID6 485 aa14.98□□□□□ -0.01
LSM4-206ENST00000600289 UTS2RQ9UKP6 389 aa14.98□□□□□ -0.01
LSM4-206ENST00000600289 TMED5Q9Y3A6 229 aa14.98□□□□□ -0.01
LSM4-206ENST00000600289 ZNF780BQ9Y6R6 833 aa14.98□□□□□ -0.01
LSM4-206ENST00000600289 FBN3Q75N90 2809 aa14.98□□□□□ -0.01
LSM4-206ENST00000600289 WWP2O00308 870 aa14.97□□□□□ -0.01
LSM4-206ENST00000600289 LSM1O15116 133 aaKnown RBP14.97□□□□□ -0.01
LSM4-206ENST00000600289 ERAL1O75616 437 aaKnown RBP14.97□□□□□ -0.01
LSM4-206ENST00000600289 SERPINE1P05121 402 aa14.97□□□□□ -0.01
LSM4-206ENST00000600289 CT62P0C5K7 136 aa14.97□□□□□ -0.01
LSM4-206ENST00000600289 S1PR1P21453 382 aa14.97□□□□□ -0.01
LSM4-206ENST00000600289 GRK2P25098 689 aa14.97□□□□□ -0.01
LSM4-206ENST00000600289 ALDH9A1P49189 494 aa14.97□□□□□ -0.01
LSM4-206ENST00000600289 CASP8Q14790 479 aa14.97□□□□□ -0.01
LSM4-206ENST00000600289 PIGGQ5H8A4 983 aa14.97□□□□□ -0.01
LSM4-206ENST00000600289 SH2D4BQ5SQS7 431 aa14.97□□□□□ -0.01
LSM4-206ENST00000600289 FAM71E1Q6IPT2 247 aa14.97□□□□□ -0.01
LSM4-206ENST00000600289 OPN5Q6U736 354 aa14.97□□□□□ -0.01
LSM4-206ENST00000600289 GALNTL5Q7Z4T8 443 aa14.97□□□□□ -0.01
LSM4-206ENST00000600289 VWA5B2Q8N398 1253 aa14.97□□□□□ -0.01
LSM4-206ENST00000600289 ZNF441Q8N8Z8 693 aa14.97□□□□□ -0.01
LSM4-206ENST00000600289 GOLM1Q8NBJ4 401 aa14.97□□□□□ -0.01
LSM4-206ENST00000600289 POGLUT1Q8NBL1 392 aa14.97□□□□□ -0.01
LSM4-206ENST00000600289 FAM98AQ8NCA5 519 aaKnown RBP14.97□□□□□ -0.01
LSM4-206ENST00000600289 C17orf47Q8NEP4 570 aa14.97□□□□□ -0.01
LSM4-206ENST00000600289 OR2T11Q8NH01 316 aa14.97□□□□□ -0.01
LSM4-206ENST00000600289 SLC22A8Q8TCC7 542 aa14.97□□□□□ -0.01
LSM4-206ENST00000600289 TP53INP1Q96A56 240 aa14.97□□□□□ -0.01
LSM4-206ENST00000600289 TLCD1Q96CP7 247 aa14.97□□□□□ -0.01
LSM4-206ENST00000600289 ERP27Q96DN0 273 aa14.97□□□□□ -0.01
LSM4-206ENST00000600289 PKNOX2Q96KN3 472 aa14.97□□□□□ -0.01
LSM4-206ENST00000600289 FRMD6Q96NE9 622 aa14.97□□□□□ -0.01
LSM4-206ENST00000600289 HES7Q9BYE0 225 aa14.97□□□□□ -0.01
LSM4-206ENST00000600289 WWTR1Q9GZV5 400 aa14.97□□□□□ -0.01
LSM4-206ENST00000600289 LRTM1Q9HBL6 345 aa14.97□□□□□ -0.01
LSM4-206ENST00000600289 TMBIM4Q9HC24 238 aa14.97□□□□□ -0.01
LSM4-206ENST00000600289 MAT2BQ9NZL9 334 aa14.97□□□□□ -0.01
LSM4-206ENST00000600289 KLF13Q9Y2Y9 288 aaPredicted RBP14.97□□□□□ -0.01
LSM4-206ENST00000600289 POLR3HQ9Y535 204 aaPredicted RBP14.97□□□□□ -0.01
LSM4-206ENST00000600289 PTGDR2Q9Y5Y4 395 aa14.97□□□□□ -0.01
LSM4-206ENST00000600289 A8MVJ9 347 aa14.96□□□□□ -0.01
LSM4-206ENST00000600289 TMEM233B4DJY2 109 aa14.96□□□□□ -0.01
LSM4-206ENST00000600289 SEC22BO75396 215 aa14.96□□□□□ -0.01
LSM4-206ENST00000600289 OR6B1O95007 311 aa14.96□□□□□ -0.01
LSM4-206ENST00000600289 NADKO95544 446 aaPredicted RBP14.96□□□□□ -0.01
LSM4-206ENST00000600289 NT5EP21589 574 aa14.96□□□□□ -0.01
LSM4-206ENST00000600289 SOX18P35713 384 aa14.96□□□□□ -0.01
LSM4-206ENST00000600289 SOX3P41225 446 aa14.96□□□□□ -0.01
LSM4-206ENST00000600289 DUSP2Q05923 314 aa14.96□□□□□ -0.01
LSM4-206ENST00000600289 ZNF750Q32MQ0 723 aa14.96□□□□□ -0.01
LSM4-206ENST00000600289 CES4AQ5XG92 561 aa14.96□□□□□ -0.01
LSM4-206ENST00000600289 C16orf47Q6ZP98 133 aaPredicted RBP14.96□□□□□ -0.01
LSM4-206ENST00000600289 KIRREL3Q8IZU9 778 aa14.96□□□□□ -0.01
LSM4-206ENST00000600289 SGCZQ96LD1 299 aa14.96□□□□□ -0.01
LSM4-206ENST00000600289 OR10A5Q9H207 317 aa14.96□□□□□ -0.01
LSM4-206ENST00000600289 LIN28AQ9H9Z2 209 aaKnown RBP14.96□□□□□ -0.01
LSM4-206ENST00000600289 TIMMDC1Q9NPL8 285 aa14.96□□□□□ -0.01
LSM4-206ENST00000600289 SLC35C2Q9NQQ7 365 aa14.96□□□□□ -0.01
LSM4-206ENST00000600289 KLHL1Q9NR64 748 aa14.96□□□□□ -0.01
LSM4-206ENST00000600289 HPF1Q9NWY4 346 aa14.96□□□□□ -0.01
LSM4-206ENST00000600289 ZDHHC2Q9UIJ5 367 aa14.96□□□□□ -0.01
LSM4-206ENST00000600289 HAO1Q9UJM8 370 aa14.96□□□□□ -0.01
LSM4-206ENST00000600289 ENTPD4Q9Y227 616 aa14.96□□□□□ -0.01
LSM4-206ENST00000600289 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.96□□□□□ -0.01
LSM4-206ENST00000600289 ANKUB1A6NFN9 424 aa14.95□□□□□ -0.02
LSM4-206ENST00000600289 MYO1GB0I1T2 1018 aa14.95□□□□□ -0.02
LSM4-206ENST00000600289 PIP5K1BO14986 540 aa14.95□□□□□ -0.02
LSM4-206ENST00000600289 ZNF354AO60765 605 aaPredicted RBP14.95□□□□□ -0.02
LSM4-206ENST00000600289 TBX19O60806 448 aa14.95□□□□□ -0.02
LSM4-206ENST00000600289 SLITRK5O94991 958 aa14.95□□□□□ -0.02
LSM4-206ENST00000600289 IFI6P09912 130 aa14.95□□□□□ -0.02
LSM4-206ENST00000600289 SSTR4P31391 388 aa14.95□□□□□ -0.02
LSM4-206ENST00000600289 FEN1P39748 380 aaKnown RBP14.95□□□□□ -0.02
LSM4-206ENST00000600289 ST13P50502 369 aaKnown RBP14.95□□□□□ -0.02
LSM4-206ENST00000600289 C2orf80Q0P641 193 aa14.95□□□□□ -0.02
LSM4-206ENST00000600289 MRPL49Q13405 166 aaKnown RBP14.95□□□□□ -0.02
LSM4-206ENST00000600289 CHI3L2Q15782 390 aa14.95□□□□□ -0.02
LSM4-206ENST00000600289 ZNF628Q5EBL2 1059 aa14.95□□□□□ -0.02
LSM4-206ENST00000600289 LYPD8Q6UX82 237 aa14.95□□□□□ -0.02
LSM4-206ENST00000600289 RTL4Q6ZR62 310 aa14.95□□□□□ -0.02
LSM4-206ENST00000600289 PSD4Q8NDX1 1056 aa14.95□□□□□ -0.02
LSM4-206ENST00000600289 PPP1R14CQ8TAE6 165 aa14.95□□□□□ -0.02
LSM4-206ENST00000600289 KCNK9Q9NPC2 374 aa14.95□□□□□ -0.02
LSM4-206ENST00000600289 GIMAP4Q9NUV9 329 aa14.95□□□□□ -0.02
LSM4-206ENST00000600289 EXO1Q9UQ84 846 aaKnown RBP14.95□□□□□ -0.02
LSM4-206ENST00000600289 ERVK-11Q9UQG0 969 aa14.95□□□□□ -0.02
LSM4-206ENST00000600289 CFL2Q9Y281 166 aa14.95□□□□□ -0.02
LSM4-206ENST00000600289 FIS1Q9Y3D6 152 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms