RNA–Protein interactions for RNA: ENST00000600055.1

LIG1-219, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 602 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-219ENST00000600055 MAPKAPK3Q16644 382 aa14.08□□□□□ -0.16
LIG1-219ENST00000600055 C6orf136Q5SQH8 315 aa14.08□□□□□ -0.16
LIG1-219ENST00000600055 FAM180AQ6UWF9 173 aa14.08□□□□□ -0.16
LIG1-219ENST00000600055 IKBIPQ70UQ0 350 aa14.08□□□□□ -0.16
LIG1-219ENST00000600055 SLC29A4Q7RTT9 530 aa14.08□□□□□ -0.16
LIG1-219ENST00000600055 GALNTL5Q7Z4T8 443 aa14.08□□□□□ -0.16
LIG1-219ENST00000600055 MDGA2Q7Z553 956 aa14.08□□□□□ -0.16
LIG1-219ENST00000600055 HOMEZQ8IX15 550 aa14.08□□□□□ -0.16
LIG1-219ENST00000600055 CYP4Z2PQ8N1L4 340 aa14.08□□□□□ -0.16
LIG1-219ENST00000600055 HORMAD2Q8N7B1 307 aa14.08□□□□□ -0.16
LIG1-219ENST00000600055 KAT2AQ92830 837 aa14.08□□□□□ -0.16
LIG1-219ENST00000600055 CTHRC1Q96CG8 243 aa14.08□□□□□ -0.16
LIG1-219ENST00000600055 TUBGCP3Q96CW5 907 aa14.08□□□□□ -0.16
LIG1-219ENST00000600055 BBS4Q96RK4 519 aa14.08□□□□□ -0.16
LIG1-219ENST00000600055 ANKRA2Q9H9E1 313 aa14.08□□□□□ -0.16
LIG1-219ENST00000600055 MIEF1Q9NQG6 463 aa14.08□□□□□ -0.16
LIG1-219ENST00000600055 GIMAP4Q9NUV9 329 aa14.08□□□□□ -0.16
LIG1-219ENST00000600055 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.08□□□□□ -0.16
LIG1-219ENST00000600055 BCAP29Q9UHQ4 241 aa14.08□□□□□ -0.16
LIG1-219ENST00000600055 HAO1Q9UJM8 370 aa14.08□□□□□ -0.16
LIG1-219ENST00000600055 DTX4Q9Y2E6 619 aa14.08□□□□□ -0.16
LIG1-219ENST00000600055 WBP11Q9Y2W2 641 aaKnown RBP14.08□□□□□ -0.16
LIG1-219ENST00000600055 TMED5Q9Y3A6 229 aa14.08□□□□□ -0.16
LIG1-219ENST00000600055 OR6C76A6NM76 312 aa14.07□□□□□ -0.16
LIG1-219ENST00000600055 A8MVJ9 347 aa14.07□□□□□ -0.16
LIG1-219ENST00000600055 MYO1GB0I1T2 1018 aa14.07□□□□□ -0.16
LIG1-219ENST00000600055 TCP11X1B4DZS4 312 aa14.07□□□□□ -0.16
LIG1-219ENST00000600055 CDK2AP1O14519 115 aa14.07□□□□□ -0.16
LIG1-219ENST00000600055 NME2P1O60361 137 aa14.07□□□□□ -0.16
LIG1-219ENST00000600055 SNNO75324 88 aaPredicted RBP14.07□□□□□ -0.16
LIG1-219ENST00000600055 VPS4BO75351 444 aa14.07□□□□□ -0.16
LIG1-219ENST00000600055 NME6O75414 186 aaPredicted RBP14.07□□□□□ -0.16
LIG1-219ENST00000600055 WISP2O76076 250 aa14.07□□□□□ -0.16
LIG1-219ENST00000600055 RASAL1O95294 804 aa14.07□□□□□ -0.16
LIG1-219ENST00000600055 CBX7O95931 251 aa14.07□□□□□ -0.16
LIG1-219ENST00000600055 NME2P22392 152 aa14.07□□□□□ -0.16
LIG1-219ENST00000600055 GNLYP22749 145 aa14.07□□□□□ -0.16
LIG1-219ENST00000600055 MRPL49Q13405 166 aaKnown RBP14.07□□□□□ -0.16
LIG1-219ENST00000600055 CEBPEQ15744 281 aa14.07□□□□□ -0.16
LIG1-219ENST00000600055 MPEG1Q2M385 716 aa14.07□□□□□ -0.16
LIG1-219ENST00000600055 ATP6AP1LQ52LC2 224 aa14.07□□□□□ -0.16
LIG1-219ENST00000600055 ZNF385BQ569K4 471 aa14.07□□□□□ -0.16
LIG1-219ENST00000600055 ZNF628Q5EBL2 1059 aa14.07□□□□□ -0.16
LIG1-219ENST00000600055 LYPD8Q6UX82 237 aa14.07□□□□□ -0.16
LIG1-219ENST00000600055 TMEM64Q6YI46 380 aa14.07□□□□□ -0.16
LIG1-219ENST00000600055 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.07□□□□□ -0.16
LIG1-219ENST00000600055 LIX1Q8N485 282 aa14.07□□□□□ -0.16
LIG1-219ENST00000600055 ZNF441Q8N8Z8 693 aa14.07□□□□□ -0.16
LIG1-219ENST00000600055 FNDC5Q8NAU1 212 aa14.07□□□□□ -0.16
LIG1-219ENST00000600055 OR7G1Q8NGA0 311 aa14.07□□□□□ -0.16
LIG1-219ENST00000600055 OR52R1Q8NGF1 315 aa14.07□□□□□ -0.16
LIG1-219ENST00000600055 C16orf52Q8NHV5 167 aa14.07□□□□□ -0.16
LIG1-219ENST00000600055 FAR1Q8WVX9 515 aa14.07□□□□□ -0.16
LIG1-219ENST00000600055 HPF1Q9NWY4 346 aa14.07□□□□□ -0.16
LIG1-219ENST00000600055 TAS2R7Q9NYW3 318 aa14.07□□□□□ -0.16
LIG1-219ENST00000600055 VPS4AQ9UN37 437 aa14.07□□□□□ -0.16
LIG1-219ENST00000600055 ERVK-11Q9UQG0 969 aa14.07□□□□□ -0.16
LIG1-219ENST00000600055 PCDHGB6Q9Y5F9 930 aa14.07□□□□□ -0.16
LIG1-219ENST00000600055 C2orf92A0A1B0GVN3 265 aa14.06□□□□□ -0.16
LIG1-219ENST00000600055 SNUPNO95149 360 aaKnown RBP14.06□□□□□ -0.16
LIG1-219ENST00000600055 NR0B1P51843 470 aaKnown RBP14.06□□□□□ -0.16
LIG1-219ENST00000600055 NCBP2P52298 156 aaKnown RBP eCLIP14.06□□□□□ -0.16
LIG1-219ENST00000600055 INAQ16352 499 aa14.06□□□□□ -0.16
LIG1-219ENST00000600055 IL23RQ5VWK5 629 aa14.06□□□□□ -0.16
LIG1-219ENST00000600055 ZNF324BQ6AW86 544 aaPredicted RBP14.06□□□□□ -0.16
LIG1-219ENST00000600055 ATCAYQ86WG3 371 aa14.06□□□□□ -0.16
LIG1-219ENST00000600055 SAMD14Q8IZD0 417 aaPredicted RBP14.06□□□□□ -0.16
LIG1-219ENST00000600055 FAM9CQ8IZT9 166 aa14.06□□□□□ -0.16
LIG1-219ENST00000600055 GOLGA6L1Q8N7Z2 621 aa14.06□□□□□ -0.16
LIG1-219ENST00000600055 BCORP1Q8N888 145 aa14.06□□□□□ -0.16
LIG1-219ENST00000600055 TMEM178AQ8NBL3 297 aa14.06□□□□□ -0.16
LIG1-219ENST00000600055 GALNT11Q8NCW6 608 aa14.06□□□□□ -0.16
LIG1-219ENST00000600055 ZNF675Q8TD23 568 aa14.06□□□□□ -0.16
LIG1-219ENST00000600055 NUDT8Q8WV74 236 aa14.06□□□□□ -0.16
LIG1-219ENST00000600055 ADIPOR1Q96A54 375 aa14.06□□□□□ -0.16
LIG1-219ENST00000600055 TMEM125Q96AQ2 219 aa14.06□□□□□ -0.16
LIG1-219ENST00000600055 CIDECQ96AQ7 238 aaPredicted RBP14.06□□□□□ -0.16
LIG1-219ENST00000600055 NUF2Q9BZD4 464 aa14.06□□□□□ -0.16
LIG1-219ENST00000600055 GLIPR2Q9H4G4 154 aa14.06□□□□□ -0.16
LIG1-219ENST00000600055 REEP4Q9H6H4 257 aa14.06□□□□□ -0.16
LIG1-219ENST00000600055 MANSC1Q9H8J5 431 aa14.06□□□□□ -0.16
LIG1-219ENST00000600055 AKTIPQ9H8T0 292 aa14.06□□□□□ -0.16
LIG1-219ENST00000600055 AGPAT4Q9NRZ5 378 aa14.06□□□□□ -0.16
LIG1-219ENST00000600055 THAP1Q9NVV9 213 aa14.06□□□□□ -0.16
LIG1-219ENST00000600055 CNTRLQ7Z7A1 2325 aa14.06□□□□□ -0.16
LIG1-219ENST00000600055 G3V3Y1 287 aa14.05□□□□□ -0.16
LIG1-219ENST00000600055 KITP10721 976 aa14.05□□□□□ -0.16
LIG1-219ENST00000600055 GPX3P22352 226 aa14.05□□□□□ -0.16
LIG1-219ENST00000600055 MST1P26927 711 aa14.05□□□□□ -0.16
LIG1-219ENST00000600055 MAPK1P28482 360 aa14.05□□□□□ -0.16
LIG1-219ENST00000600055 MPIP34949 423 aa14.05□□□□□ -0.16
LIG1-219ENST00000600055 EMDP50402 254 aa14.05□□□□□ -0.16
LIG1-219ENST00000600055 GPR85P60893 370 aa14.05□□□□□ -0.16
LIG1-219ENST00000600055 KCNC4Q03721 635 aa14.05□□□□□ -0.16
LIG1-219ENST00000600055 PTGR1Q14914 329 aa14.05□□□□□ -0.16
LIG1-219ENST00000600055 NNATQ16517 81 aa14.05□□□□□ -0.16
LIG1-219ENST00000600055 HLA-DQA1Q5Y7H0 255 aa14.05□□□□□ -0.16
LIG1-219ENST00000600055 ATG16L1Q676U5 607 aa14.05□□□□□ -0.16
LIG1-219ENST00000600055 OPN5Q6U736 354 aa14.05□□□□□ -0.16
LIG1-219ENST00000600055 SULF2Q8IWU5 870 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms