RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 FOLH1Q04609 750 aa11.28□□□□□ -0.6
SHKBP1-213ENST00000597325 STX4Q12846 297 aa11.28□□□□□ -0.6
SHKBP1-213ENST00000597325 ART3Q13508 389 aa11.28□□□□□ -0.6
SHKBP1-213ENST00000597325 MAP7Q14244 749 aa11.28□□□□□ -0.6
SHKBP1-213ENST00000597325 ERV3-1Q14264 604 aa11.28□□□□□ -0.6
SHKBP1-213ENST00000597325 ZSCAN26Q16670 478 aa11.28□□□□□ -0.6
SHKBP1-213ENST00000597325 ZNF385BQ569K4 471 aa11.28□□□□□ -0.6
SHKBP1-213ENST00000597325 C6orf10Q5SRN2 563 aa11.28□□□□□ -0.6
SHKBP1-213ENST00000597325 C6orf163Q5TEZ5 329 aa11.28□□□□□ -0.6
SHKBP1-213ENST00000597325 MLIPQ5VWP3 458 aa11.28□□□□□ -0.6
SHKBP1-213ENST00000597325 C6orf89Q6UWU4 347 aa11.28□□□□□ -0.6
SHKBP1-213ENST00000597325 QSOX2Q6ZRP7 698 aa11.28□□□□□ -0.6
SHKBP1-213ENST00000597325 OVCH1Q7RTY7 1134 aa11.28□□□□□ -0.6
SHKBP1-213ENST00000597325 ANKRD46Q86W74 232 aa11.28□□□□□ -0.6
SHKBP1-213ENST00000597325 PRSS58Q8IYP2 241 aa11.28□□□□□ -0.6
SHKBP1-213ENST00000597325 LRRC25Q8N386 305 aaPredicted RBP11.28□□□□□ -0.6
SHKBP1-213ENST00000597325 ESX1Q8N693 406 aa11.28□□□□□ -0.6
SHKBP1-213ENST00000597325 TMEM52Q8NDY8 209 aa11.28□□□□□ -0.6
SHKBP1-213ENST00000597325 C7orf57Q8NEG2 295 aa11.28□□□□□ -0.6
SHKBP1-213ENST00000597325 DNAJB14Q8TBM8 379 aa11.28□□□□□ -0.6
SHKBP1-213ENST00000597325 NUDT8Q8WV74 236 aa11.28□□□□□ -0.6
SHKBP1-213ENST00000597325 CIDECQ96AQ7 238 aaPredicted RBP11.28□□□□□ -0.6
SHKBP1-213ENST00000597325 RCN3Q96D15 328 aa11.28□□□□□ -0.6
SHKBP1-213ENST00000597325 C5orf34Q96MH7 638 aa11.28□□□□□ -0.6
SHKBP1-213ENST00000597325 TGIF2Q9GZN2 237 aa11.28□□□□□ -0.6
SHKBP1-213ENST00000597325 WDR54Q9H977 334 aa11.28□□□□□ -0.6
SHKBP1-213ENST00000597325 EFCAB1Q9HAE3 211 aa11.28□□□□□ -0.6
SHKBP1-213ENST00000597325 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.28□□□□□ -0.6
SHKBP1-213ENST00000597325 PADI1Q9ULC6 663 aa11.28□□□□□ -0.6
SHKBP1-213ENST00000597325 SLC5A6Q9Y289 635 aa11.28□□□□□ -0.6
SHKBP1-213ENST00000597325 PADI2Q9Y2J8 665 aa11.28□□□□□ -0.6
SHKBP1-213ENST00000597325 SCN3AQ9NY46 2000 aa11.28□□□□□ -0.6
SHKBP1-213ENST00000597325 IGLV3-12A0A075B6K2 115 aa11.27□□□□□ -0.61
SHKBP1-213ENST00000597325 PRSS51A0A1B0GVH4 220 aa11.27□□□□□ -0.61
SHKBP1-213ENST00000597325 A0A1W2PRB8 838 aa11.27□□□□□ -0.61
SHKBP1-213ENST00000597325 RFXANKO14593 260 aa11.27□□□□□ -0.61
SHKBP1-213ENST00000597325 AIM2O14862 343 aa11.27□□□□□ -0.61
SHKBP1-213ENST00000597325 FGF17O60258 216 aa11.27□□□□□ -0.61
SHKBP1-213ENST00000597325 OR10H2O60403 315 aa11.27□□□□□ -0.61
SHKBP1-213ENST00000597325 CTNSO60931 367 aa11.27□□□□□ -0.61
SHKBP1-213ENST00000597325 LDB3O75112 727 aa11.27□□□□□ -0.61
SHKBP1-213ENST00000597325 JRKO75564 520 aa11.27□□□□□ -0.61
SHKBP1-213ENST00000597325 ATP5HO75947 161 aa11.27□□□□□ -0.61
SHKBP1-213ENST00000597325 KCNH1O95259 989 aa11.27□□□□□ -0.61
SHKBP1-213ENST00000597325 ANP32DO95626 131 aa11.27□□□□□ -0.61
SHKBP1-213ENST00000597325 GPR75O95800 540 aa11.27□□□□□ -0.61
SHKBP1-213ENST00000597325 HEXBP07686 556 aa11.27□□□□□ -0.61
SHKBP1-213ENST00000597325 ZGLP1P0C6A0 271 aa11.27□□□□□ -0.61
SHKBP1-213ENST00000597325 C8orf89P0DMQ9 161 aa11.27□□□□□ -0.61
SHKBP1-213ENST00000597325 EFNA1P20827 205 aaPredicted RBP11.27□□□□□ -0.61
SHKBP1-213ENST00000597325 XKP51811 444 aa11.27□□□□□ -0.61
SHKBP1-213ENST00000597325 NCBP2P52298 156 aaKnown RBP eCLIP11.27□□□□□ -0.61
SHKBP1-213ENST00000597325 HNRNPFP52597 415 aaKnown RBP11.27□□□□□ -0.61
SHKBP1-213ENST00000597325 MANFP55145 182 aaKnown RBP11.27□□□□□ -0.61
SHKBP1-213ENST00000597325 PLIN5Q00G26 463 aa11.27□□□□□ -0.61
SHKBP1-213ENST00000597325 ID2Q02363 134 aa11.27□□□□□ -0.61
SHKBP1-213ENST00000597325 HSPB3Q12988 150 aa11.27□□□□□ -0.61
SHKBP1-213ENST00000597325 NFYCQ13952 458 aa11.27□□□□□ -0.61
SHKBP1-213ENST00000597325 SERTAD2Q14140 314 aa11.27□□□□□ -0.61
SHKBP1-213ENST00000597325 NCF4Q15080 339 aa11.27□□□□□ -0.61
SHKBP1-213ENST00000597325 PRR30Q53SZ7 412 aaPredicted RBP11.27□□□□□ -0.61
SHKBP1-213ENST00000597325 VWA2Q5GFL6 755 aa11.27□□□□□ -0.61
SHKBP1-213ENST00000597325 SLC2A7Q6PXP3 512 aa11.27□□□□□ -0.61
SHKBP1-213ENST00000597325 FAM198BQ6UWH4 519 aa11.27□□□□□ -0.61
SHKBP1-213ENST00000597325 DNAJC14Q6Y2X3 702 aaPredicted RBP11.27□□□□□ -0.61
SHKBP1-213ENST00000597325 NLGN4XQ8N0W4 816 aa11.27□□□□□ -0.61
SHKBP1-213ENST00000597325 NLGN4YQ8NFZ3 816 aaPredicted RBP11.27□□□□□ -0.61
SHKBP1-213ENST00000597325 OR4A15Q8NGL6 344 aa11.27□□□□□ -0.61
SHKBP1-213ENST00000597325 DNAJB8Q8NHS0 232 aa11.27□□□□□ -0.61
SHKBP1-213ENST00000597325 STT3BQ8TCJ2 826 aa11.27□□□□□ -0.61
SHKBP1-213ENST00000597325 UCN3Q969E3 161 aa11.27□□□□□ -0.61
SHKBP1-213ENST00000597325 LURAP1Q96LR2 239 aa11.27□□□□□ -0.61
SHKBP1-213ENST00000597325 CCDC115Q96NT0 180 aa11.27□□□□□ -0.61
SHKBP1-213ENST00000597325 PANX1Q96RD7 426 aa11.27□□□□□ -0.61
SHKBP1-213ENST00000597325 NPAS2Q99743 824 aa11.27□□□□□ -0.61
SHKBP1-213ENST00000597325 PELOQ9BRX2 385 aaKnown RBP11.27□□□□□ -0.61
SHKBP1-213ENST00000597325 CHST8Q9H2A9 424 aa11.27□□□□□ -0.61
SHKBP1-213ENST00000597325 SLC26A1Q9H2B4 701 aa11.27□□□□□ -0.61
SHKBP1-213ENST00000597325 GPN2Q9H9Y4 310 aaPredicted RBP11.27□□□□□ -0.61
SHKBP1-213ENST00000597325 NEUROD4Q9HD90 331 aa11.27□□□□□ -0.61
SHKBP1-213ENST00000597325 LANCL2Q9NS86 450 aa11.27□□□□□ -0.61
SHKBP1-213ENST00000597325 SLC22A11Q9NSA0 550 aa11.27□□□□□ -0.61
SHKBP1-213ENST00000597325 ACSS1Q9NUB1 689 aaPredicted RBP11.27□□□□□ -0.61
SHKBP1-213ENST00000597325 GID8Q9NWU2 228 aa11.27□□□□□ -0.61
SHKBP1-213ENST00000597325 NDE1Q9NXR1 346 aa11.27□□□□□ -0.61
SHKBP1-213ENST00000597325 BTNL2Q9UIR0 455 aa11.27□□□□□ -0.61
SHKBP1-213ENST00000597325 CES1P1Q9UKY3 287 aa11.27□□□□□ -0.61
SHKBP1-213ENST00000597325 MKL2Q9ULH7 1088 aa11.27□□□□□ -0.61
SHKBP1-213ENST00000597325 A0A096LPI6 279 aa11.26□□□□□ -0.61
SHKBP1-213ENST00000597325 ASPDHA6ND91 283 aa11.26□□□□□ -0.61
SHKBP1-213ENST00000597325 FBP2O00757 339 aa11.26□□□□□ -0.61
SHKBP1-213ENST00000597325 CPSF4O95639 269 aaKnown RBP11.26□□□□□ -0.61
SHKBP1-213ENST00000597325 ABCB1P08183 1280 aaPredicted RBP11.26□□□□□ -0.61
SHKBP1-213ENST00000597325 CYC1P08574 325 aa11.26□□□□□ -0.61
SHKBP1-213ENST00000597325 CPMP14384 443 aa11.26□□□□□ -0.61
SHKBP1-213ENST00000597325 CD1EP15812 388 aa11.26□□□□□ -0.61
SHKBP1-213ENST00000597325 PORP16435 677 aaPredicted RBP11.26□□□□□ -0.61
SHKBP1-213ENST00000597325 MAOAP21397 527 aa11.26□□□□□ -0.61
SHKBP1-213ENST00000597325 SOAT1P35610 550 aa11.26□□□□□ -0.61
SHKBP1-213ENST00000597325 FEN1P39748 380 aaKnown RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms