RNA–Protein interactions for RNA: ENST00000596121.5

VRK3-210, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 983 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-210ENST00000596121 ANKRD26P1Q6NSI1 321 aa10.31□□□□□ -0.76
VRK3-210ENST00000596121 CLEC18BQ6UXF7 455 aa10.31□□□□□ -0.76
VRK3-210ENST00000596121 IL20RBQ6UXL0 311 aa10.31□□□□□ -0.76
VRK3-210ENST00000596121 DDIASQ8IXT1 998 aa10.31□□□□□ -0.76
VRK3-210ENST00000596121 LRRC25Q8N386 305 aaPredicted RBP10.31□□□□□ -0.76
VRK3-210ENST00000596121 TMEM156Q8N614 296 aa10.31□□□□□ -0.76
VRK3-210ENST00000596121 CLEC18CQ8NCF0 446 aa10.31□□□□□ -0.76
VRK3-210ENST00000596121 OR9A2Q8NGT5 310 aa10.31□□□□□ -0.76
VRK3-210ENST00000596121 CLHC1Q8NHS4 586 aa10.31□□□□□ -0.76
VRK3-210ENST00000596121 NUBPLQ8TB37 319 aa10.31□□□□□ -0.76
VRK3-210ENST00000596121 MGARPQ8TDB4 240 aa10.31□□□□□ -0.76
VRK3-210ENST00000596121 KAT2AQ92830 837 aa10.31□□□□□ -0.76
VRK3-210ENST00000596121 GFM2Q969S9 779 aaKnown RBP10.31□□□□□ -0.76
VRK3-210ENST00000596121 ADIPOR1Q96A54 375 aa10.31□□□□□ -0.76
VRK3-210ENST00000596121 PAIP2Q9BPZ3 127 aaKnown RBP10.31□□□□□ -0.76
VRK3-210ENST00000596121 OR10A5Q9H207 317 aa10.31□□□□□ -0.76
VRK3-210ENST00000596121 SLC35C2Q9NQQ7 365 aa10.31□□□□□ -0.76
VRK3-210ENST00000596121 PNPOQ9NVS9 261 aa10.31□□□□□ -0.76
VRK3-210ENST00000596121 TAS2R7Q9NYW3 318 aa10.31□□□□□ -0.76
VRK3-210ENST00000596121 COPS7AQ9UBW8 275 aa10.31□□□□□ -0.76
VRK3-210ENST00000596121 VPS4AQ9UN37 437 aa10.31□□□□□ -0.76
VRK3-210ENST00000596121 LRRK2Q5S007 2527 aa10.31□□□□□ -0.76
VRK3-210ENST00000596121 GOLGA6L10A6NI86 522 aa10.3□□□□□ -0.76
VRK3-210ENST00000596121 CDK2AP1O14519 115 aa10.3□□□□□ -0.76
VRK3-210ENST00000596121 ZNHIT1O43257 154 aa10.3□□□□□ -0.76
VRK3-210ENST00000596121 PEX11AO75192 247 aa10.3□□□□□ -0.76
VRK3-210ENST00000596121 SASH3O75995 380 aa10.3□□□□□ -0.76
VRK3-210ENST00000596121 LRATO95237 230 aa10.3□□□□□ -0.76
VRK3-210ENST00000596121 RASAL1O95294 804 aa10.3□□□□□ -0.76
VRK3-210ENST00000596121 CHEK2O96017 543 aa10.3□□□□□ -0.76
VRK3-210ENST00000596121 NEFHP12036 1026 aa10.3□□□□□ -0.76
VRK3-210ENST00000596121 BCKDHAP12694 445 aa10.3□□□□□ -0.76
VRK3-210ENST00000596121 GPX3P22352 226 aa10.3□□□□□ -0.76
VRK3-210ENST00000596121 RFC3P40938 356 aa10.3□□□□□ -0.76
VRK3-210ENST00000596121 SLC1A6P48664 564 aa10.3□□□□□ -0.76
VRK3-210ENST00000596121 SLC18A1P54219 525 aa10.3□□□□□ -0.76
VRK3-210ENST00000596121 GPR85P60893 370 aa10.3□□□□□ -0.76
VRK3-210ENST00000596121 HEPACAMQ14CZ8 416 aa10.3□□□□□ -0.76
VRK3-210ENST00000596121 ZNF791Q3KP31 576 aaPredicted RBP10.3□□□□□ -0.76
VRK3-210ENST00000596121 ZNF385BQ569K4 471 aa10.3□□□□□ -0.76
VRK3-210ENST00000596121 C6orf136Q5SQH8 315 aa10.3□□□□□ -0.76
VRK3-210ENST00000596121 FHL5Q5TD97 284 aa10.3□□□□□ -0.76
VRK3-210ENST00000596121 AGBL2Q5U5Z8 902 aa10.3□□□□□ -0.76
VRK3-210ENST00000596121 HHATQ5VTY9 493 aa10.3□□□□□ -0.76
VRK3-210ENST00000596121 FAM180AQ6UWF9 173 aa10.3□□□□□ -0.76
VRK3-210ENST00000596121 ATCAYQ86WG3 371 aa10.3□□□□□ -0.76
VRK3-210ENST00000596121 SIAH3Q8IW03 269 aa10.3□□□□□ -0.76
VRK3-210ENST00000596121 SULF2Q8IWU5 870 aa10.3□□□□□ -0.76
VRK3-210ENST00000596121 CYP4Z2PQ8N1L4 340 aa10.3□□□□□ -0.76
VRK3-210ENST00000596121 CPSF7Q8N684 471 aaKnown RBP10.3□□□□□ -0.76
VRK3-210ENST00000596121 BCORP1Q8N888 145 aa10.3□□□□□ -0.76
VRK3-210ENST00000596121 OR5L2Q8NGL0 311 aa10.3□□□□□ -0.76
VRK3-210ENST00000596121 C16orf52Q8NHV5 167 aa10.3□□□□□ -0.76
VRK3-210ENST00000596121 PPP1R14CQ8TAE6 165 aa10.3□□□□□ -0.76
VRK3-210ENST00000596121 ASB15Q8WXK1 588 aa10.3□□□□□ -0.76
VRK3-210ENST00000596121 METTL2AQ96IZ6 378 aaKnown RBP10.3□□□□□ -0.76
VRK3-210ENST00000596121 ART5Q96L15 291 aa10.3□□□□□ -0.76
VRK3-210ENST00000596121 C5orf34Q96MH7 638 aa10.3□□□□□ -0.76
VRK3-210ENST00000596121 FRMD6Q96NE9 622 aa10.3□□□□□ -0.76
VRK3-210ENST00000596121 TSSK3Q96PN8 268 aa10.3□□□□□ -0.76
VRK3-210ENST00000596121 GAL3ST4Q96RP7 486 aa10.3□□□□□ -0.76
VRK3-210ENST00000596121 BRINP2Q9C0B6 783 aa10.3□□□□□ -0.76
VRK3-210ENST00000596121 CLMPQ9H6B4 373 aa10.3□□□□□ -0.76
VRK3-210ENST00000596121 SH2D2AQ9NP31 389 aa10.3□□□□□ -0.76
VRK3-210ENST00000596121 OLAHQ9NV23 265 aa10.3□□□□□ -0.76
VRK3-210ENST00000596121 EHD3Q9NZN3 535 aa10.3□□□□□ -0.76
VRK3-210ENST00000596121 HAO1Q9UJM8 370 aa10.3□□□□□ -0.76
VRK3-210ENST00000596121 PSME2Q9UL46 239 aa10.3□□□□□ -0.76
VRK3-210ENST00000596121 ZNF780BQ9Y6R6 833 aa10.3□□□□□ -0.76
VRK3-210ENST00000596121 ZGRF1Q86YA3 2104 aa10.3□□□□□ -0.76
VRK3-210ENST00000596121 COL12A1Q99715 3063 aa10.3□□□□□ -0.76
VRK3-210ENST00000596121 C2orf92A0A1B0GVN3 265 aa10.29□□□□□ -0.76
VRK3-210ENST00000596121 ANKUB1A6NFN9 424 aa10.29□□□□□ -0.76
VRK3-210ENST00000596121 OR6C76A6NM76 312 aa10.29□□□□□ -0.76
VRK3-210ENST00000596121 A8MVJ9 347 aa10.29□□□□□ -0.76
VRK3-210ENST00000596121 G3V3Y1 287 aa10.29□□□□□ -0.76
VRK3-210ENST00000596121 AKAP10O43572 662 aa10.29□□□□□ -0.76
VRK3-210ENST00000596121 DYRK3O43781 588 aa10.29□□□□□ -0.76
VRK3-210ENST00000596121 PEX1O43933 1283 aa10.29□□□□□ -0.76
VRK3-210ENST00000596121 SNNO75324 88 aaPredicted RBP10.29□□□□□ -0.76
VRK3-210ENST00000596121 GSTM5P46439 218 aa10.29□□□□□ -0.76
VRK3-210ENST00000596121 MEOX1P50221 254 aa10.29□□□□□ -0.76
VRK3-210ENST00000596121 EMDP50402 254 aa10.29□□□□□ -0.76
VRK3-210ENST00000596121 STX3Q13277 289 aa10.29□□□□□ -0.76
VRK3-210ENST00000596121 PDCD2Q16342 344 aaPredicted RBP10.29□□□□□ -0.76
VRK3-210ENST00000596121 INAQ16352 499 aa10.29□□□□□ -0.76
VRK3-210ENST00000596121 DESI1Q6ICB0 168 aa10.29□□□□□ -0.76
VRK3-210ENST00000596121 IKBIPQ70UQ0 350 aa10.29□□□□□ -0.76
VRK3-210ENST00000596121 SLC29A4Q7RTT9 530 aa10.29□□□□□ -0.76
VRK3-210ENST00000596121 VWA5B2Q8N398 1253 aa10.29□□□□□ -0.76
VRK3-210ENST00000596121 HORMAD2Q8N7B1 307 aa10.29□□□□□ -0.76
VRK3-210ENST00000596121 TMEM178AQ8NBL3 297 aa10.29□□□□□ -0.76
VRK3-210ENST00000596121 PSD4Q8NDX1 1056 aa10.29□□□□□ -0.76
VRK3-210ENST00000596121 OR7G2Q8NG99 324 aa10.29□□□□□ -0.76
VRK3-210ENST00000596121 OR7G1Q8NGA0 311 aa10.29□□□□□ -0.76
VRK3-210ENST00000596121 OR52R1Q8NGF1 315 aa10.29□□□□□ -0.76
VRK3-210ENST00000596121 ZNF675Q8TD23 568 aa10.29□□□□□ -0.76
VRK3-210ENST00000596121 NR4A3Q92570 626 aa10.29□□□□□ -0.76
VRK3-210ENST00000596121 CIDECQ96AQ7 238 aaPredicted RBP10.29□□□□□ -0.76
VRK3-210ENST00000596121 PPP1R36Q96LQ0 422 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms