RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 REXO5Q96IC2 774 aaKnown RBP13.79□□□□□ -0.2
SHKBP1-211ENST00000595945 PTCHD1Q96NR3 888 aa13.79□□□□□ -0.2
SHKBP1-211ENST00000595945 PELOQ9BRX2 385 aaKnown RBP13.79□□□□□ -0.2
SHKBP1-211ENST00000595945 PCDHAC1Q9H158 963 aa13.79□□□□□ -0.2
SHKBP1-211ENST00000595945 CXorf21Q9HAI6 301 aa13.79□□□□□ -0.2
SHKBP1-211ENST00000595945 C3orf14Q9HBI5 128 aa13.79□□□□□ -0.2
SHKBP1-211ENST00000595945 ZCCHC3Q9NUD5 404 aaKnown RBP13.79□□□□□ -0.2
SHKBP1-211ENST00000595945 ZNF639Q9UID6 485 aa13.79□□□□□ -0.2
SHKBP1-211ENST00000595945 C19orf53Q9UNZ5 99 aaPredicted RBP13.79□□□□□ -0.2
SHKBP1-211ENST00000595945 DMXL1Q9Y485 3027 aa13.79□□□□□ -0.2
SHKBP1-211ENST00000595945 TCRBV16S1A1N1A0A5B0 115 aa13.78□□□□□ -0.2
SHKBP1-211ENST00000595945 ELOVL7A1L3X0 281 aa13.78□□□□□ -0.2
SHKBP1-211ENST00000595945 SYNDIG1LA6NDD5 238 aa13.78□□□□□ -0.2
SHKBP1-211ENST00000595945 C9orf172C9J069 976 aa13.78□□□□□ -0.2
SHKBP1-211ENST00000595945 CYC1P08574 325 aa13.78□□□□□ -0.2
SHKBP1-211ENST00000595945 NUDT7P0C024 238 aa13.78□□□□□ -0.2
SHKBP1-211ENST00000595945 ZGLP1P0C6A0 271 aa13.78□□□□□ -0.2
SHKBP1-211ENST00000595945 GGT1P19440 569 aa13.78□□□□□ -0.2
SHKBP1-211ENST00000595945 ATP6V1B2P21281 511 aa13.78□□□□□ -0.2
SHKBP1-211ENST00000595945 NT5EP21589 574 aa13.78□□□□□ -0.2
SHKBP1-211ENST00000595945 MRPS35P82673 323 aaKnown RBP13.78□□□□□ -0.2
SHKBP1-211ENST00000595945 PRR5P85299 388 aa13.78□□□□□ -0.2
SHKBP1-211ENST00000595945 OCA2Q04671 838 aa13.78□□□□□ -0.2
SHKBP1-211ENST00000595945 TP53BP2Q13625 1128 aa13.78□□□□□ -0.2
SHKBP1-211ENST00000595945 CCNIQ14094 377 aa13.78□□□□□ -0.2
SHKBP1-211ENST00000595945 NKG7Q16617 165 aa13.78□□□□□ -0.2
SHKBP1-211ENST00000595945 TRMT12Q53H54 448 aaKnown RBP13.78□□□□□ -0.2
SHKBP1-211ENST00000595945 C6orf163Q5TEZ5 329 aa13.78□□□□□ -0.2
SHKBP1-211ENST00000595945 LCN8Q6JVE9 175 aa13.78□□□□□ -0.2
SHKBP1-211ENST00000595945 ERICH5Q6P6B1 374 aa13.78□□□□□ -0.2
SHKBP1-211ENST00000595945 BHLHB9Q6PI77 547 aa13.78□□□□□ -0.2
SHKBP1-211ENST00000595945 FAM198BQ6UWH4 519 aa13.78□□□□□ -0.2
SHKBP1-211ENST00000595945 LAPTM4BQ86VI4 370 aa13.78□□□□□ -0.2
SHKBP1-211ENST00000595945 IFNEQ86WN2 208 aa13.78□□□□□ -0.2
SHKBP1-211ENST00000595945 HORMAD2Q8N7B1 307 aa13.78□□□□□ -0.2
SHKBP1-211ENST00000595945 NUP43Q8NFH3 380 aa13.78□□□□□ -0.2
SHKBP1-211ENST00000595945 TSLPQ969D9 159 aa13.78□□□□□ -0.2
SHKBP1-211ENST00000595945 PPWD1Q96BP3 646 aaKnown RBP13.78□□□□□ -0.2
SHKBP1-211ENST00000595945 SLC35G5Q96KT7 338 aa13.78□□□□□ -0.2
SHKBP1-211ENST00000595945 SPSB2Q99619 263 aa13.78□□□□□ -0.2
SHKBP1-211ENST00000595945 ASPSCR1Q9BZE9 553 aa13.78□□□□□ -0.2
SHKBP1-211ENST00000595945 ULBP3Q9BZM4 244 aa13.78□□□□□ -0.2
SHKBP1-211ENST00000595945 B3GNT4Q9C0J1 378 aa13.78□□□□□ -0.2
SHKBP1-211ENST00000595945 VN1R1Q9GZP7 353 aa13.78□□□□□ -0.2
SHKBP1-211ENST00000595945 PIF1Q9H611 641 aa13.78□□□□□ -0.2
SHKBP1-211ENST00000595945 TMEM38AQ9H6F2 299 aa13.78□□□□□ -0.2
SHKBP1-211ENST00000595945 AKIRIN1Q9H9L7 192 aaPredicted RBP13.78□□□□□ -0.2
SHKBP1-211ENST00000595945 ACTR3BQ9P1U1 418 aa13.78□□□□□ -0.2
SHKBP1-211ENST00000595945 SNX13Q9Y5W8 968 aa13.78□□□□□ -0.2
SHKBP1-211ENST00000595945 SPTBN2O15020 2390 aa13.78□□□□□ -0.2
SHKBP1-211ENST00000595945 H0YHG0 523 aa13.77□□□□□ -0.21
SHKBP1-211ENST00000595945 ARPC2O15144 300 aa13.77□□□□□ -0.21
SHKBP1-211ENST00000595945 MGRN1O60291 552 aa13.77□□□□□ -0.21
SHKBP1-211ENST00000595945 OR10H2O60403 315 aa13.77□□□□□ -0.21
SHKBP1-211ENST00000595945 CBX7O95931 251 aa13.77□□□□□ -0.21
SHKBP1-211ENST00000595945 JMJD7P0C870 316 aa13.77□□□□□ -0.21
SHKBP1-211ENST00000595945 ETFAP13804 333 aa13.77□□□□□ -0.21
SHKBP1-211ENST00000595945 AGXTP21549 392 aa13.77□□□□□ -0.21
SHKBP1-211ENST00000595945 MAN2A2P49641 1150 aa13.77□□□□□ -0.21
SHKBP1-211ENST00000595945 TXNL4AP83876 142 aaKnown RBP13.77□□□□□ -0.21
SHKBP1-211ENST00000595945 EEF1A2Q05639 463 aaKnown RBP13.77□□□□□ -0.21
SHKBP1-211ENST00000595945 RBBP4Q09028 425 aa13.77□□□□□ -0.21
SHKBP1-211ENST00000595945 TARDBPQ13148 414 aaKnown RBP eCLIP13.77□□□□□ -0.21
SHKBP1-211ENST00000595945 DUSP8Q13202 625 aa13.77□□□□□ -0.21
SHKBP1-211ENST00000595945 FLOT2Q14254 428 aa13.77□□□□□ -0.21
SHKBP1-211ENST00000595945 VMACQ2NL98 169 aa13.77□□□□□ -0.21
SHKBP1-211ENST00000595945 MINDY4Q4G0A6 757 aa13.77□□□□□ -0.21
SHKBP1-211ENST00000595945 GCNT6Q5T4J0 391 aa13.77□□□□□ -0.21
SHKBP1-211ENST00000595945 TMEM151BQ8IW70 566 aa13.77□□□□□ -0.21
SHKBP1-211ENST00000595945 GALNT12Q8IXK2 581 aa13.77□□□□□ -0.21
SHKBP1-211ENST00000595945 TNIP2Q8NFZ5 429 aa13.77□□□□□ -0.21
SHKBP1-211ENST00000595945 DGAT2Q96PD7 388 aa13.77□□□□□ -0.21
SHKBP1-211ENST00000595945 WDR54Q9H977 334 aa13.77□□□□□ -0.21
SHKBP1-211ENST00000595945 ANKRA2Q9H9E1 313 aa13.77□□□□□ -0.21
SHKBP1-211ENST00000595945 IFT80Q9P2H3 777 aaPredicted RBP13.77□□□□□ -0.21
SHKBP1-211ENST00000595945 EGFL7Q9UHF1 273 aa13.77□□□□□ -0.21
SHKBP1-211ENST00000595945 RAPGEFL1Q9UHV5 662 aa13.77□□□□□ -0.21
SHKBP1-211ENST00000595945 MAGEL2Q9UJ55 1249 aa13.77□□□□□ -0.21
SHKBP1-211ENST00000595945 HMGN4O00479 90 aa13.76□□□□□ -0.21
SHKBP1-211ENST00000595945 GFRA3O60609 400 aa13.76□□□□□ -0.21
SHKBP1-211ENST00000595945 STK17BO94768 372 aa13.76□□□□□ -0.21
SHKBP1-211ENST00000595945 HMGN2P05204 90 aaKnown RBP13.76□□□□□ -0.21
SHKBP1-211ENST00000595945 KLK3P07288 261 aaPredicted RBP13.76□□□□□ -0.21
SHKBP1-211ENST00000595945 ATXN8OSP0DMR3 200 aa13.76□□□□□ -0.21
SHKBP1-211ENST00000595945 ARAFP10398 606 aa13.76□□□□□ -0.21
SHKBP1-211ENST00000595945 MATN1P21941 496 aa13.76□□□□□ -0.21
SHKBP1-211ENST00000595945 PCGF2P35227 344 aa13.76□□□□□ -0.21
SHKBP1-211ENST00000595945 MAP3K8P41279 467 aa13.76□□□□□ -0.21
SHKBP1-211ENST00000595945 CRATP43155 626 aa13.76□□□□□ -0.21
SHKBP1-211ENST00000595945 KHKP50053 298 aa13.76□□□□□ -0.21
SHKBP1-211ENST00000595945 NOVA1P51513 510 aaKnown RBP13.76□□□□□ -0.21
SHKBP1-211ENST00000595945 CASP9P55211 416 aa13.76□□□□□ -0.21
SHKBP1-211ENST00000595945 DSTNP60981 165 aa13.76□□□□□ -0.21
SHKBP1-211ENST00000595945 RPS26P62854 115 aaKnown RBP13.76□□□□□ -0.21
SHKBP1-211ENST00000595945 FUT7Q11130 342 aa13.76□□□□□ -0.21
SHKBP1-211ENST00000595945 VEZF1Q14119 521 aa13.76□□□□□ -0.21
SHKBP1-211ENST00000595945 CYP51A1Q16850 503 aa13.76□□□□□ -0.21
SHKBP1-211ENST00000595945 DHFR2Q86XF0 187 aa13.76□□□□□ -0.21
SHKBP1-211ENST00000595945 PROSER1Q86XN7 944 aa13.76□□□□□ -0.21
SHKBP1-211ENST00000595945 PRSS58Q8IYP2 241 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms