RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 STAB1Q9NY15 2570 aa12.01□□□□□ -0.49
SCAF1-202ENST00000595242 MPDZO75970 2070 aa12□□□□□ -0.49
SCAF1-202ENST00000595242 TCRBV3S1A0A5B6 114 aa12□□□□□ -0.49
SCAF1-202ENST00000595242 NPIPA5E9PKD4 350 aa12□□□□□ -0.49
SCAF1-202ENST00000595242 ADAM10O14672 748 aa12□□□□□ -0.49
SCAF1-202ENST00000595242 PEX1O43933 1283 aa12□□□□□ -0.49
SCAF1-202ENST00000595242 SLC16A8O95907 504 aa12□□□□□ -0.49
SCAF1-202ENST00000595242 CHRM5P08912 532 aaPredicted RBP12□□□□□ -0.49
SCAF1-202ENST00000595242 ERGP11308 486 aa12□□□□□ -0.49
SCAF1-202ENST00000595242 CD22P20273 847 aa12□□□□□ -0.49
SCAF1-202ENST00000595242 ATP6V1C1P21283 382 aa12□□□□□ -0.49
SCAF1-202ENST00000595242 MAPK1P28482 360 aa12□□□□□ -0.49
SCAF1-202ENST00000595242 SHMT2P34897 504 aa12□□□□□ -0.49
SCAF1-202ENST00000595242 EEFSECP57772 596 aaKnown RBP12□□□□□ -0.49
SCAF1-202ENST00000595242 ALDH6A1Q02252 535 aaKnown RBP12□□□□□ -0.49
SCAF1-202ENST00000595242 MYBPHQ13203 477 aa12□□□□□ -0.49
SCAF1-202ENST00000595242 CHIT1Q13231 466 aa12□□□□□ -0.49
SCAF1-202ENST00000595242 NFYCQ13952 458 aa12□□□□□ -0.49
SCAF1-202ENST00000595242 CPSF6Q16630 551 aaKnown RBP eCLIP12□□□□□ -0.49
SCAF1-202ENST00000595242 IMPG1Q17R60 797 aa12□□□□□ -0.49
SCAF1-202ENST00000595242 CCSMST1Q4G0I0 132 aa12□□□□□ -0.49
SCAF1-202ENST00000595242 ZNF766Q5HY98 468 aa12□□□□□ -0.49
SCAF1-202ENST00000595242 PAGE3Q5JUK9 113 aa12□□□□□ -0.49
SCAF1-202ENST00000595242 ABHD17BQ5VST6 288 aa12□□□□□ -0.49
SCAF1-202ENST00000595242 CXXC5Q7LFL8 322 aaKnown RBP12□□□□□ -0.49
SCAF1-202ENST00000595242 MCATQ8IVS2 390 aaKnown RBP12□□□□□ -0.49
SCAF1-202ENST00000595242 PRSS58Q8IYP2 241 aa12□□□□□ -0.49
SCAF1-202ENST00000595242 BHLHE22Q8NFJ8 381 aaPredicted RBP12□□□□□ -0.49
SCAF1-202ENST00000595242 OR9A1PQ8NGU1 263 aa12□□□□□ -0.49
SCAF1-202ENST00000595242 ZNF480Q8WV37 535 aa12□□□□□ -0.49
SCAF1-202ENST00000595242 DNAJC9Q8WXX5 260 aa12□□□□□ -0.49
SCAF1-202ENST00000595242 TMEM125Q96AQ2 219 aa12□□□□□ -0.49
SCAF1-202ENST00000595242 PYCR2Q96C36 320 aa12□□□□□ -0.49
SCAF1-202ENST00000595242 OR4K3Q96R72 315 aa12□□□□□ -0.49
SCAF1-202ENST00000595242 HBEGFQ99075 208 aa12□□□□□ -0.49
SCAF1-202ENST00000595242 ATG10Q9H0Y0 220 aa12□□□□□ -0.49
SCAF1-202ENST00000595242 LIME1Q9H400 295 aa12□□□□□ -0.49
SCAF1-202ENST00000595242 EHD1Q9H4M9 534 aa12□□□□□ -0.49
SCAF1-202ENST00000595242 ELOVL6Q9H5J4 265 aa12□□□□□ -0.49
SCAF1-202ENST00000595242 CMTM6Q9NX76 183 aa12□□□□□ -0.49
SCAF1-202ENST00000595242 DNAJB12Q9NXW2 375 aaKnown RBP12□□□□□ -0.49
SCAF1-202ENST00000595242 C3orf18Q9UK00 162 aa12□□□□□ -0.49
SCAF1-202ENST00000595242 NPIPA1Q9UND3 350 aa12□□□□□ -0.49
SCAF1-202ENST00000595242 TSC22D4Q9Y3Q8 395 aa12□□□□□ -0.49
SCAF1-202ENST00000595242 MAU2Q9Y6X3 613 aa12□□□□□ -0.49
SCAF1-202ENST00000595242 NKX2-6A6NCS4 301 aa11.99□□□□□ -0.49
SCAF1-202ENST00000595242 CLGNO14967 610 aa11.99□□□□□ -0.49
SCAF1-202ENST00000595242 DNAJA2O60884 412 aa11.99□□□□□ -0.49
SCAF1-202ENST00000595242 ZGLP1P0C6A0 271 aa11.99□□□□□ -0.49
SCAF1-202ENST00000595242 MSX1P28360 303 aa11.99□□□□□ -0.49
SCAF1-202ENST00000595242 MEOX1P50221 254 aa11.99□□□□□ -0.49
SCAF1-202ENST00000595242 CLNS1AP54105 237 aaKnown RBP11.99□□□□□ -0.49
SCAF1-202ENST00000595242 CLDN8P56748 225 aa11.99□□□□□ -0.49
SCAF1-202ENST00000595242 SESN3P58005 492 aa11.99□□□□□ -0.49
SCAF1-202ENST00000595242 C21orf58P58505 322 aa11.99□□□□□ -0.49
SCAF1-202ENST00000595242 HMGCS1Q01581 520 aa11.99□□□□□ -0.49
SCAF1-202ENST00000595242 IRF8Q02556 426 aa11.99□□□□□ -0.49
SCAF1-202ENST00000595242 OCA2Q04671 838 aa11.99□□□□□ -0.49
SCAF1-202ENST00000595242 TFF3Q07654 80 aa11.99□□□□□ -0.49
SCAF1-202ENST00000595242 NAE1Q13564 534 aa11.99□□□□□ -0.49
SCAF1-202ENST00000595242 DOC2AQ14183 400 aa11.99□□□□□ -0.49
SCAF1-202ENST00000595242 TAF11Q15544 211 aa11.99□□□□□ -0.49
SCAF1-202ENST00000595242 TIGD2Q4W5G0 525 aa11.99□□□□□ -0.49
SCAF1-202ENST00000595242 YOD1Q5VVQ6 348 aaPredicted RBP11.99□□□□□ -0.49
SCAF1-202ENST00000595242 LCN8Q6JVE9 175 aa11.99□□□□□ -0.49
SCAF1-202ENST00000595242 SUSD1Q6UWL2 747 aa11.99□□□□□ -0.49
SCAF1-202ENST00000595242 MSANTD1Q6ZTZ1 278 aa11.99□□□□□ -0.49
SCAF1-202ENST00000595242 EID3Q8N140 333 aa11.99□□□□□ -0.49
SCAF1-202ENST00000595242 PQLC1Q8N2U9 271 aa11.99□□□□□ -0.49
SCAF1-202ENST00000595242 DTWD1Q8N5C7 304 aa11.99□□□□□ -0.49
SCAF1-202ENST00000595242 STT3BQ8TCJ2 826 aa11.99□□□□□ -0.49
SCAF1-202ENST00000595242 TFGQ92734 400 aaPredicted RBP11.99□□□□□ -0.49
SCAF1-202ENST00000595242 VPS33AQ96AX1 596 aa11.99□□□□□ -0.49
SCAF1-202ENST00000595242 MIEF2Q96C03 454 aa11.99□□□□□ -0.49
SCAF1-202ENST00000595242 ARSGQ96EG1 525 aa11.99□□□□□ -0.49
SCAF1-202ENST00000595242 ZNF570Q96NI8 536 aa11.99□□□□□ -0.49
SCAF1-202ENST00000595242 ALPK1Q96QP1 1244 aa11.99□□□□□ -0.49
SCAF1-202ENST00000595242 ZBTB18Q99592 522 aa11.99□□□□□ -0.49
SCAF1-202ENST00000595242 VCX3BQ9H321 246 aa11.99□□□□□ -0.49
SCAF1-202ENST00000595242 BRF2Q9HAW0 419 aa11.99□□□□□ -0.49
SCAF1-202ENST00000595242 ZNF282Q9UDV7 671 aaPredicted RBP11.99□□□□□ -0.49
SCAF1-202ENST00000595242 MCM8Q9UJA3 840 aa11.99□□□□□ -0.49
SCAF1-202ENST00000595242 ATRQ13535 2644 aa11.99□□□□□ -0.49
SCAF1-202ENST00000595242 IGHV1-45A0A0A0MS14 117 aa11.98□□□□□ -0.49
SCAF1-202ENST00000595242 KRT87PA6NCN2 255 aa11.98□□□□□ -0.49
SCAF1-202ENST00000595242 AQP12BA6NM10 295 aa11.98□□□□□ -0.49
SCAF1-202ENST00000595242 ISM1B1AKI9 464 aa11.98□□□□□ -0.49
SCAF1-202ENST00000595242 C9JVG2 144 aa11.98□□□□□ -0.49
SCAF1-202ENST00000595242 PRRG2O14669 202 aa11.98□□□□□ -0.49
SCAF1-202ENST00000595242 ASNA1O43681 348 aa11.98□□□□□ -0.49
SCAF1-202ENST00000595242 PRMT3O60678 531 aa11.98□□□□□ -0.49
SCAF1-202ENST00000595242 SEC22BO75396 215 aa11.98□□□□□ -0.49
SCAF1-202ENST00000595242 IL6P05231 212 aa11.98□□□□□ -0.49
SCAF1-202ENST00000595242 HOXD4P09016 255 aaPredicted RBP11.98□□□□□ -0.49
SCAF1-202ENST00000595242 ITGAMP11215 1152 aa11.98□□□□□ -0.49
SCAF1-202ENST00000595242 BCKDHAP12694 445 aa11.98□□□□□ -0.49
SCAF1-202ENST00000595242 CXCR2P25025 360 aa11.98□□□□□ -0.49
SCAF1-202ENST00000595242 TBPL1P62380 186 aa11.98□□□□□ -0.49
SCAF1-202ENST00000595242 MRPS22P82650 360 aaKnown RBP11.98□□□□□ -0.49
SCAF1-202ENST00000595242 HSF1Q00613 529 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms