RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 CTHRC1Q96CG8 243 aa13.87□□□□□ -0.19
DDX39A-221ENST00000593026 ZBED6CLQ96FA7 236 aaPredicted RBP13.87□□□□□ -0.19
DDX39A-221ENST00000593026 THOC1Q96FV9 657 aaKnown RBP13.87□□□□□ -0.19
DDX39A-221ENST00000593026 AMDHD1Q96NU7 426 aa13.87□□□□□ -0.19
DDX39A-221ENST00000593026 NPAS2Q99743 824 aa13.87□□□□□ -0.19
DDX39A-221ENST00000593026 EBF4Q9BQW3 602 aa13.87□□□□□ -0.19
DDX39A-221ENST00000593026 OR10A5Q9H207 317 aa13.87□□□□□ -0.19
DDX39A-221ENST00000593026 GLIPR2Q9H4G4 154 aa13.87□□□□□ -0.19
DDX39A-221ENST00000593026 NPHS2Q9NP85 383 aa13.87□□□□□ -0.19
DDX39A-221ENST00000593026 SLAMF7Q9NQ25 335 aa13.87□□□□□ -0.19
DDX39A-221ENST00000593026 FGFR1OP2Q9NVK5 253 aa13.87□□□□□ -0.19
DDX39A-221ENST00000593026 UBDO15205 165 aa13.86□□□□□ -0.19
DDX39A-221ENST00000593026 SLITRK5O94991 958 aa13.86□□□□□ -0.19
DDX39A-221ENST00000593026 CLPSP04118 112 aa13.86□□□□□ -0.19
DDX39A-221ENST00000593026 IDO1P14902 403 aa13.86□□□□□ -0.19
DDX39A-221ENST00000593026 S1PR1P21453 382 aa13.86□□□□□ -0.19
DDX39A-221ENST00000593026 SOX18P35713 384 aa13.86□□□□□ -0.19
DDX39A-221ENST00000593026 CD97P48960 835 aa13.86□□□□□ -0.19
DDX39A-221ENST00000593026 CLNS1AP54105 237 aaKnown RBP13.86□□□□□ -0.19
DDX39A-221ENST00000593026 MLF1P58340 268 aa13.86□□□□□ -0.19
DDX39A-221ENST00000593026 ARG2P78540 354 aa13.86□□□□□ -0.19
DDX39A-221ENST00000593026 NFATC3Q12968 1075 aa13.86□□□□□ -0.19
DDX39A-221ENST00000593026 HSPB3Q12988 150 aa13.86□□□□□ -0.19
DDX39A-221ENST00000593026 EXOSC7Q15024 291 aaKnown RBP13.86□□□□□ -0.19
DDX39A-221ENST00000593026 RPS6KA2Q15349 733 aa13.86□□□□□ -0.19
DDX39A-221ENST00000593026 MPEG1Q2M385 716 aa13.86□□□□□ -0.19
DDX39A-221ENST00000593026 TRMT12Q53H54 448 aaKnown RBP13.86□□□□□ -0.19
DDX39A-221ENST00000593026 NATD1Q8N6N6 113 aa13.86□□□□□ -0.19
DDX39A-221ENST00000593026 ZNF615Q8N8J6 731 aa13.86□□□□□ -0.19
DDX39A-221ENST00000593026 NUBPLQ8TB37 319 aa13.86□□□□□ -0.19
DDX39A-221ENST00000593026 COQ8BQ96D53 544 aa13.86□□□□□ -0.19
DDX39A-221ENST00000593026 ERP27Q96DN0 273 aa13.86□□□□□ -0.19
DDX39A-221ENST00000593026 MARK4Q96L34 752 aa13.86□□□□□ -0.19
DDX39A-221ENST00000593026 GAL3ST4Q96RP7 486 aa13.86□□□□□ -0.19
DDX39A-221ENST00000593026 SIKE1Q9BRV8 207 aa13.86□□□□□ -0.19
DDX39A-221ENST00000593026 RNF32Q9H0A6 362 aa13.86□□□□□ -0.19
DDX39A-221ENST00000593026 LIN28AQ9H9Z2 209 aaKnown RBP13.86□□□□□ -0.19
DDX39A-221ENST00000593026 ACSS1Q9NUB1 689 aaPredicted RBP13.86□□□□□ -0.19
DDX39A-221ENST00000593026 PLA2G3Q9NZ20 509 aa13.86□□□□□ -0.19
DDX39A-221ENST00000593026 MYOTQ9UBF9 498 aa13.86□□□□□ -0.19
DDX39A-221ENST00000593026 BCAP29Q9UHQ4 241 aa13.86□□□□□ -0.19
DDX39A-221ENST00000593026 ZNF639Q9UID6 485 aa13.86□□□□□ -0.19
DDX39A-221ENST00000593026 GPR45Q9Y5Y3 372 aa13.86□□□□□ -0.19
DDX39A-221ENST00000593026 TMEM200CA6NKL6 621 aa13.85□□□□□ -0.19
DDX39A-221ENST00000593026 E9PBE3 544 aa13.85□□□□□ -0.19
DDX39A-221ENST00000593026 WWP2O00308 870 aa13.85□□□□□ -0.19
DDX39A-221ENST00000593026 ANKRD28O15084 1053 aa13.85□□□□□ -0.19
DDX39A-221ENST00000593026 PLOD3O60568 738 aa13.85□□□□□ -0.19
DDX39A-221ENST00000593026 PRAMEF2O60811 474 aa13.85□□□□□ -0.19
DDX39A-221ENST00000593026 ITGA10O75578 1167 aa13.85□□□□□ -0.19
DDX39A-221ENST00000593026 BCAS2O75934 225 aaPredicted RBP13.85□□□□□ -0.19
DDX39A-221ENST00000593026 WDPCPO95876 746 aa13.85□□□□□ -0.19
DDX39A-221ENST00000593026 CBX7O95931 251 aa13.85□□□□□ -0.19
DDX39A-221ENST00000593026 F10P00742 488 aa13.85□□□□□ -0.19
DDX39A-221ENST00000593026 TROVE2P10155 538 aaKnown RBP eCLIP13.85□□□□□ -0.19
DDX39A-221ENST00000593026 LAMP1P11279 417 aa13.85□□□□□ -0.19
DDX39A-221ENST00000593026 FRKP42685 505 aaPredicted RBP13.85□□□□□ -0.19
DDX39A-221ENST00000593026 MANFP55145 182 aaKnown RBP13.85□□□□□ -0.19
DDX39A-221ENST00000593026 NME5P56597 212 aa13.85□□□□□ -0.19
DDX39A-221ENST00000593026 C19orf57Q0VDD7 668 aa13.85□□□□□ -0.19
DDX39A-221ENST00000593026 KLRB1Q12918 225 aa13.85□□□□□ -0.19
DDX39A-221ENST00000593026 EBPQ15125 230 aaKnown RBP13.85□□□□□ -0.19
DDX39A-221ENST00000593026 GSTA3Q16772 222 aa13.85□□□□□ -0.19
DDX39A-221ENST00000593026 PGS1Q32NB8 556 aa13.85□□□□□ -0.19
DDX39A-221ENST00000593026 HLA-DQA1Q5Y7H0 255 aa13.85□□□□□ -0.19
DDX39A-221ENST00000593026 C16orf47Q6ZP98 133 aaPredicted RBP13.85□□□□□ -0.19
DDX39A-221ENST00000593026 ZNF551Q7Z340 670 aaPredicted RBP13.85□□□□□ -0.19
DDX39A-221ENST00000593026 CAMKMTQ7Z624 323 aa13.85□□□□□ -0.19
DDX39A-221ENST00000593026 PTRH1Q86Y79 214 aaKnown RBP13.85□□□□□ -0.19
DDX39A-221ENST00000593026 RBMXL3Q8N7X1 1067 aaKnown RBP13.85□□□□□ -0.19
DDX39A-221ENST00000593026 TEX19Q8NA77 164 aa13.85□□□□□ -0.19
DDX39A-221ENST00000593026 OR7G2Q8NG99 324 aa13.85□□□□□ -0.19
DDX39A-221ENST00000593026 OR52R1Q8NGF1 315 aa13.85□□□□□ -0.19
DDX39A-221ENST00000593026 C16orf52Q8NHV5 167 aa13.85□□□□□ -0.19
DDX39A-221ENST00000593026 NUDT8Q8WV74 236 aa13.85□□□□□ -0.19
DDX39A-221ENST00000593026 HAS2Q92819 552 aa13.85□□□□□ -0.19
DDX39A-221ENST00000593026 TESCQ96BS2 214 aa13.85□□□□□ -0.19
DDX39A-221ENST00000593026 UTP23Q9BRU9 249 aaKnown RBP13.85□□□□□ -0.19
DDX39A-221ENST00000593026 CCDC28BQ9BUN5 200 aa13.85□□□□□ -0.19
DDX39A-221ENST00000593026 DUSP26Q9BV47 211 aa13.85□□□□□ -0.19
DDX39A-221ENST00000593026 MFRPQ9BY79 579 aa13.85□□□□□ -0.19
DDX39A-221ENST00000593026 BHLHE41Q9C0J9 482 aaPredicted RBP13.85□□□□□ -0.19
DDX39A-221ENST00000593026 WWTR1Q9GZV5 400 aa13.85□□□□□ -0.19
DDX39A-221ENST00000593026 DCTN4Q9UJW0 460 aa13.85□□□□□ -0.19
DDX39A-221ENST00000593026 CFL2Q9Y281 166 aa13.85□□□□□ -0.19
DDX39A-221ENST00000593026 YARS2Q9Y2Z4 477 aaKnown RBP13.85□□□□□ -0.19
DDX39A-221ENST00000593026 ATRXP46100 2492 aa13.84□□□□□ -0.19
DDX39A-221ENST00000593026 C2orf92A0A1B0GVN3 265 aa13.84□□□□□ -0.19
DDX39A-221ENST00000593026 A0A1W2PRB8 838 aa13.84□□□□□ -0.19
DDX39A-221ENST00000593026 OR5H15A6NDH6 313 aa13.84□□□□□ -0.19
DDX39A-221ENST00000593026 PLOD2O00469 737 aa13.84□□□□□ -0.19
DDX39A-221ENST00000593026 OR2J2O76002 312 aa13.84□□□□□ -0.19
DDX39A-221ENST00000593026 EFNA1P20827 205 aaPredicted RBP13.84□□□□□ -0.19
DDX39A-221ENST00000593026 GPC1P35052 558 aa13.84□□□□□ -0.19
DDX39A-221ENST00000593026 CASRP41180 1078 aa13.84□□□□□ -0.19
DDX39A-221ENST00000593026 MC3RP41968 323 aa13.84□□□□□ -0.19
DDX39A-221ENST00000593026 ST13P50502 369 aaKnown RBP13.84□□□□□ -0.19
DDX39A-221ENST00000593026 SSR4P51571 173 aa13.84□□□□□ -0.19
DDX39A-221ENST00000593026 UFM1P61960 85 aa13.84□□□□□ -0.19
DDX39A-221ENST00000593026 OC90Q02509 493 aaPredicted RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms