RNA–Protein interactions for RNA: ENST00000592822.1

TPM4-216, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-216ENST00000592822 EXOSC7Q15024 291 aaKnown RBP9.23□□□□□ -0.93
TPM4-216ENST00000592822 MEP1AQ16819 746 aa9.23□□□□□ -0.93
TPM4-216ENST00000592822 TRMT12Q53H54 448 aaKnown RBP9.23□□□□□ -0.93
TPM4-216ENST00000592822 SOWAHCQ53LP3 525 aaPredicted RBP9.23□□□□□ -0.93
TPM4-216ENST00000592822 CPTPQ5TA50 214 aa9.23□□□□□ -0.93
TPM4-216ENST00000592822 FHL5Q5TD97 284 aa9.23□□□□□ -0.93
TPM4-216ENST00000592822 C6orf163Q5TEZ5 329 aa9.23□□□□□ -0.93
TPM4-216ENST00000592822 ABHD17BQ5VST6 288 aa9.23□□□□□ -0.93
TPM4-216ENST00000592822 CGB2Q6NT52 195 aa9.23□□□□□ -0.93
TPM4-216ENST00000592822 IGFL3Q6UXB1 125 aa9.23□□□□□ -0.93
TPM4-216ENST00000592822 RNF111Q6ZNA4 994 aa9.23□□□□□ -0.93
TPM4-216ENST00000592822 ACAD11Q709F0 780 aa9.23□□□□□ -0.93
TPM4-216ENST00000592822 ZNF551Q7Z340 670 aaPredicted RBP9.23□□□□□ -0.93
TPM4-216ENST00000592822 CAMKMTQ7Z624 323 aa9.23□□□□□ -0.93
TPM4-216ENST00000592822 RPS19BP1Q86WX3 136 aaKnown RBP9.23□□□□□ -0.93
TPM4-216ENST00000592822 C9orf40Q8IXQ3 194 aa9.23□□□□□ -0.93
TPM4-216ENST00000592822 FAM9CQ8IZT9 166 aa9.23□□□□□ -0.93
TPM4-216ENST00000592822 LGI4Q8N135 537 aa9.23□□□□□ -0.93
TPM4-216ENST00000592822 VWA5B2Q8N398 1253 aa9.23□□□□□ -0.93
TPM4-216ENST00000592822 OR7G2Q8NG99 324 aa9.23□□□□□ -0.93
TPM4-216ENST00000592822 OR7G1Q8NGA0 311 aa9.23□□□□□ -0.93
TPM4-216ENST00000592822 OR8K3Q8NH51 312 aa9.23□□□□□ -0.93
TPM4-216ENST00000592822 SLC39A7Q92504 469 aa9.23□□□□□ -0.93
TPM4-216ENST00000592822 KAT2AQ92830 837 aa9.23□□□□□ -0.93
TPM4-216ENST00000592822 MARK4Q96L34 752 aa9.23□□□□□ -0.93
TPM4-216ENST00000592822 ZNF317Q96PQ6 595 aaPredicted RBP9.23□□□□□ -0.93
TPM4-216ENST00000592822 CCDC28BQ9BUN5 200 aa9.23□□□□□ -0.93
TPM4-216ENST00000592822 DPY30Q9C005 99 aa9.23□□□□□ -0.93
TPM4-216ENST00000592822 BRINP2Q9C0B6 783 aa9.23□□□□□ -0.93
TPM4-216ENST00000592822 OR10A5Q9H207 317 aa9.23□□□□□ -0.93
TPM4-216ENST00000592822 LIN28AQ9H9Z2 209 aaKnown RBP9.23□□□□□ -0.93
TPM4-216ENST00000592822 TCF7L2Q9NQB0 619 aa9.23□□□□□ -0.93
TPM4-216ENST00000592822 FGFR1OP2Q9NVK5 253 aa9.23□□□□□ -0.93
TPM4-216ENST00000592822 FAM53CQ9NYF3 392 aa9.23□□□□□ -0.93
TPM4-216ENST00000592822 PLA2G3Q9NZ20 509 aa9.23□□□□□ -0.93
TPM4-216ENST00000592822 STMN3Q9NZ72 180 aa9.23□□□□□ -0.93
TPM4-216ENST00000592822 TEKT2Q9UIF3 430 aa9.23□□□□□ -0.93
TPM4-216ENST00000592822 DCTN4Q9UJW0 460 aa9.23□□□□□ -0.93
TPM4-216ENST00000592822 CSAG2Q9Y5P2 127 aa9.23□□□□□ -0.93
TPM4-216ENST00000592822 OR6C76A6NM76 312 aa9.22□□□□□ -0.93
TPM4-216ENST00000592822 E9PBE3 544 aa9.22□□□□□ -0.93
TPM4-216ENST00000592822 PLOD2O00469 737 aa9.22□□□□□ -0.93
TPM4-216ENST00000592822 UBDO15205 165 aa9.22□□□□□ -0.93
TPM4-216ENST00000592822 POLR3GO15318 223 aaPredicted RBP9.22□□□□□ -0.93
TPM4-216ENST00000592822 PLOD3O60568 738 aa9.22□□□□□ -0.93
TPM4-216ENST00000592822 NME6O75414 186 aaPredicted RBP9.22□□□□□ -0.93
TPM4-216ENST00000592822 WDPCPO95876 746 aa9.22□□□□□ -0.93
TPM4-216ENST00000592822 F10P00742 488 aa9.22□□□□□ -0.93
TPM4-216ENST00000592822 IDO1P14902 403 aa9.22□□□□□ -0.93
TPM4-216ENST00000592822 IL12AP29459 219 aa9.22□□□□□ -0.93
TPM4-216ENST00000592822 WNT3P56703 355 aa9.22□□□□□ -0.93
TPM4-216ENST00000592822 EBPQ15125 230 aaKnown RBP9.22□□□□□ -0.93
TPM4-216ENST00000592822 GSTA3Q16772 222 aa9.22□□□□□ -0.93
TPM4-216ENST00000592822 PGS1Q32NB8 556 aa9.22□□□□□ -0.93
TPM4-216ENST00000592822 PDCD4Q53EL6 469 aaKnown RBP9.22□□□□□ -0.93
TPM4-216ENST00000592822 TMEM107Q6UX40 140 aa9.22□□□□□ -0.93
TPM4-216ENST00000592822 HPS6Q86YV9 775 aa9.22□□□□□ -0.93
TPM4-216ENST00000592822 BEST3Q8N1M1 668 aa9.22□□□□□ -0.93
TPM4-216ENST00000592822 RBMXL3Q8N7X1 1067 aaKnown RBP9.22□□□□□ -0.93
TPM4-216ENST00000592822 OR52R1Q8NGF1 315 aa9.22□□□□□ -0.93
TPM4-216ENST00000592822 STON2Q8WXE9 905 aa9.22□□□□□ -0.93
TPM4-216ENST00000592822 TESCQ96BS2 214 aa9.22□□□□□ -0.93
TPM4-216ENST00000592822 ERP27Q96DN0 273 aa9.22□□□□□ -0.93
TPM4-216ENST00000592822 ZBED6CLQ96FA7 236 aaPredicted RBP9.22□□□□□ -0.93
TPM4-216ENST00000592822 PRPF18Q99633 342 aaKnown RBP9.22□□□□□ -0.93
TPM4-216ENST00000592822 BHLHE41Q9C0J9 482 aaPredicted RBP9.22□□□□□ -0.93
TPM4-216ENST00000592822 RNF32Q9H0A6 362 aa9.22□□□□□ -0.93
TPM4-216ENST00000592822 CLMPQ9H6B4 373 aa9.22□□□□□ -0.93
TPM4-216ENST00000592822 EPS8L2Q9H6S3 715 aa9.22□□□□□ -0.93
TPM4-216ENST00000592822 SDR39U1Q9NRG7 319 aaPredicted RBP9.22□□□□□ -0.93
TPM4-216ENST00000592822 ACSS1Q9NUB1 689 aaPredicted RBP9.22□□□□□ -0.93
TPM4-216ENST00000592822 ATAD3AQ9NVI7 634 aa9.22□□□□□ -0.93
TPM4-216ENST00000592822 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.22□□□□□ -0.93
TPM4-216ENST00000592822 MYOTQ9UBF9 498 aa9.22□□□□□ -0.93
TPM4-216ENST00000592822 BCAP29Q9UHQ4 241 aa9.22□□□□□ -0.93
TPM4-216ENST00000592822 MAPRE3Q9UPY8 281 aa9.22□□□□□ -0.93
TPM4-216ENST00000592822 DTX4Q9Y2E6 619 aa9.22□□□□□ -0.93
TPM4-216ENST00000592822 NUP214P35658 2090 aaPredicted RBP9.22□□□□□ -0.93
TPM4-216ENST00000592822 A0A087WV62 115 aa9.21□□□□□ -0.94
TPM4-216ENST00000592822 A0A0G2JND7 137 aa9.21□□□□□ -0.94
TPM4-216ENST00000592822 A0A1W2PRB8 838 aa9.21□□□□□ -0.94
TPM4-216ENST00000592822 C9JVG2 144 aa9.21□□□□□ -0.94
TPM4-216ENST00000592822 WWP2O00308 870 aa9.21□□□□□ -0.94
TPM4-216ENST00000592822 ZNF354AO60765 605 aaPredicted RBP9.21□□□□□ -0.94
TPM4-216ENST00000592822 PRAMEF2O60811 474 aa9.21□□□□□ -0.94
TPM4-216ENST00000592822 ITGA10O75578 1167 aa9.21□□□□□ -0.94
TPM4-216ENST00000592822 OR2J2O76002 312 aa9.21□□□□□ -0.94
TPM4-216ENST00000592822 SLITRK5O94991 958 aa9.21□□□□□ -0.94
TPM4-216ENST00000592822 TROVE2P10155 538 aaKnown RBP eCLIP9.21□□□□□ -0.94
TPM4-216ENST00000592822 DDX5P17844 614 aaKnown RBP9.21□□□□□ -0.94
TPM4-216ENST00000592822 GPX3P22352 226 aa9.21□□□□□ -0.94
TPM4-216ENST00000592822 TRHRP34981 398 aaPredicted RBP9.21□□□□□ -0.94
TPM4-216ENST00000592822 CD96P40200 585 aa9.21□□□□□ -0.94
TPM4-216ENST00000592822 MC3RP41968 323 aa9.21□□□□□ -0.94
TPM4-216ENST00000592822 ZFP36L2P47974 494 aaKnown RBP9.21□□□□□ -0.94
TPM4-216ENST00000592822 EMDP50402 254 aa9.21□□□□□ -0.94
TPM4-216ENST00000592822 CDK9P50750 372 aaKnown RBP9.21□□□□□ -0.94
TPM4-216ENST00000592822 CLNS1AP54105 237 aaKnown RBP9.21□□□□□ -0.94
TPM4-216ENST00000592822 MANFP55145 182 aaKnown RBP9.21□□□□□ -0.94
TPM4-216ENST00000592822 PHC1P78364 1004 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms