RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 GABRA1P14867 456 aa9.57□□□□□ -0.88
VPS4B-207ENST00000591519 ENDOUP21128 410 aaKnown RBP9.57□□□□□ -0.88
VPS4B-207ENST00000591519 CNTFP26441 200 aa9.57□□□□□ -0.88
VPS4B-207ENST00000591519 SERPINB3P29508 390 aa9.57□□□□□ -0.88
VPS4B-207ENST00000591519 BSGP35613 385 aa9.57□□□□□ -0.88
VPS4B-207ENST00000591519 HSD17B3P37058 310 aa9.57□□□□□ -0.88
VPS4B-207ENST00000591519 PIGAP37287 484 aa9.57□□□□□ -0.88
VPS4B-207ENST00000591519 BUD31P41223 144 aaPredicted RBP9.57□□□□□ -0.88
VPS4B-207ENST00000591519 ALDH18A1P54886 795 aaKnown RBP9.57□□□□□ -0.88
VPS4B-207ENST00000591519 HNRNPH2P55795 449 aaKnown RBP9.57□□□□□ -0.88
VPS4B-207ENST00000591519 SLC37A1P57057 533 aa9.57□□□□□ -0.88
VPS4B-207ENST00000591519 WLSQ5T9L3 541 aa9.57□□□□□ -0.88
VPS4B-207ENST00000591519 LGSNQ5TDP6 509 aa9.57□□□□□ -0.88
VPS4B-207ENST00000591519 CES4AQ5XG92 561 aa9.57□□□□□ -0.88
VPS4B-207ENST00000591519 LIX1LQ8IVB5 337 aa9.57□□□□□ -0.88
VPS4B-207ENST00000591519 FBXW8Q8N3Y1 598 aa9.57□□□□□ -0.88
VPS4B-207ENST00000591519 RNF175Q8N4F7 328 aa9.57□□□□□ -0.88
VPS4B-207ENST00000591519 MYRIPQ8NFW9 859 aa9.57□□□□□ -0.88
VPS4B-207ENST00000591519 OR10Q1Q8NGQ4 319 aa9.57□□□□□ -0.88
VPS4B-207ENST00000591519 OR2W6PQ8NHA6 318 aa9.57□□□□□ -0.88
VPS4B-207ENST00000591519 WDR20Q8TBZ3 569 aa9.57□□□□□ -0.88
VPS4B-207ENST00000591519 EPS8L3Q8TE67 593 aaKnown RBP9.57□□□□□ -0.88
VPS4B-207ENST00000591519 TP53INP1Q96A56 240 aa9.57□□□□□ -0.88
VPS4B-207ENST00000591519 REPS1Q96D71 796 aa9.57□□□□□ -0.88
VPS4B-207ENST00000591519 GPR78Q96P69 363 aa9.57□□□□□ -0.88
VPS4B-207ENST00000591519 MTERF1Q99551 399 aaKnown RBP9.57□□□□□ -0.88
VPS4B-207ENST00000591519 ZNF559Q9BR84 538 aa9.57□□□□□ -0.88
VPS4B-207ENST00000591519 LDAHQ9H6V9 325 aa9.57□□□□□ -0.88
VPS4B-207ENST00000591519 DMRT3Q9NQL9 472 aa9.57□□□□□ -0.88
VPS4B-207ENST00000591519 PSMC3IPQ9P2W1 217 aaPredicted RBP9.57□□□□□ -0.88
VPS4B-207ENST00000591519 Q9UFV3 132 aa9.57□□□□□ -0.88
VPS4B-207ENST00000591519 TNPO3Q9Y5L0 923 aaKnown RBP9.57□□□□□ -0.88
VPS4B-207ENST00000591519 CHCHD2Q9Y6H1 151 aaPredicted RBP9.57□□□□□ -0.88
VPS4B-207ENST00000591519 C2CD3Q4AC94 2353 aa9.56□□□□□ -0.88
VPS4B-207ENST00000591519 TLDC2A0PJX2 215 aa9.56□□□□□ -0.88
VPS4B-207ENST00000591519 WASHC1A8K0Z3 465 aa9.56□□□□□ -0.88
VPS4B-207ENST00000591519 AHRRA9YTQ3 701 aa9.56□□□□□ -0.88
VPS4B-207ENST00000591519 TMPRSS11DO60235 418 aa9.56□□□□□ -0.88
VPS4B-207ENST00000591519 EEDO75530 441 aaKnown RBP9.56□□□□□ -0.88
VPS4B-207ENST00000591519 CLPSP04118 112 aa9.56□□□□□ -0.88
VPS4B-207ENST00000591519 THBS1P07996 1170 aa9.56□□□□□ -0.88
VPS4B-207ENST00000591519 RFPL3SP0C7P2 107 aa9.56□□□□□ -0.88
VPS4B-207ENST00000591519 FAM58BPP0C7Q3 252 aa9.56□□□□□ -0.88
VPS4B-207ENST00000591519 SLC35E2P0CK97 266 aa9.56□□□□□ -0.88
VPS4B-207ENST00000591519 ADH7P40394 386 aa9.56□□□□□ -0.88
VPS4B-207ENST00000591519 MAGEA12P43365 314 aa9.56□□□□□ -0.88
VPS4B-207ENST00000591519 RAP1GDS1P52306 607 aa9.56□□□□□ -0.88
VPS4B-207ENST00000591519 DLX5P56178 289 aa9.56□□□□□ -0.88
VPS4B-207ENST00000591519 RPS13P62277 151 aaKnown RBP9.56□□□□□ -0.88
VPS4B-207ENST00000591519 HERVK_113P63132 956 aa9.56□□□□□ -0.88
VPS4B-207ENST00000591519 ERVK-8P63133 956 aa9.56□□□□□ -0.88
VPS4B-207ENST00000591519 ZNF267Q14586 743 aaPredicted RBP9.56□□□□□ -0.88
VPS4B-207ENST00000591519 EBPQ15125 230 aaKnown RBP9.56□□□□□ -0.88
VPS4B-207ENST00000591519 NTRK2Q16620 822 aa9.56□□□□□ -0.88
VPS4B-207ENST00000591519 PFKFB4Q16877 469 aa9.56□□□□□ -0.88
VPS4B-207ENST00000591519 SLC25A35Q3KQZ1 300 aa9.56□□□□□ -0.88
VPS4B-207ENST00000591519 TECRLQ5HYJ1 363 aa9.56□□□□□ -0.88
VPS4B-207ENST00000591519 TBCELQ5QJ74 424 aa9.56□□□□□ -0.88
VPS4B-207ENST00000591519 C1orf185Q5T7R7 199 aa9.56□□□□□ -0.88
VPS4B-207ENST00000591519 RIPPLY2Q5TAB7 128 aa9.56□□□□□ -0.88
VPS4B-207ENST00000591519 SLC29A4Q7RTT9 530 aa9.56□□□□□ -0.88
VPS4B-207ENST00000591519 ZNF441Q8N8Z8 693 aa9.56□□□□□ -0.88
VPS4B-207ENST00000591519 EIF1ADQ8N9N8 165 aaKnown RBP9.56□□□□□ -0.88
VPS4B-207ENST00000591519 SREK1Q8WXA9 508 aaKnown RBP9.56□□□□□ -0.88
VPS4B-207ENST00000591519 RIT1Q92963 219 aa9.56□□□□□ -0.88
VPS4B-207ENST00000591519 NTNG2Q96CW9 530 aa9.56□□□□□ -0.88
VPS4B-207ENST00000591519 PHF21BQ96EK2 531 aa9.56□□□□□ -0.88
VPS4B-207ENST00000591519 CNPPD1Q9BV87 410 aa9.56□□□□□ -0.88
VPS4B-207ENST00000591519 ERVK-6Q9BXR3 956 aa9.56□□□□□ -0.88
VPS4B-207ENST00000591519 PARD6BQ9BYG5 372 aa9.56□□□□□ -0.88
VPS4B-207ENST00000591519 WWTR1Q9GZV5 400 aa9.56□□□□□ -0.88
VPS4B-207ENST00000591519 ZNF703Q9H7S9 590 aaPredicted RBP9.56□□□□□ -0.88
VPS4B-207ENST00000591519 ACTR8Q9H981 624 aa9.56□□□□□ -0.88
VPS4B-207ENST00000591519 LYARQ9NX58 379 aaKnown RBP9.56□□□□□ -0.88
VPS4B-207ENST00000591519 CNOT11Q9UKZ1 510 aaKnown RBP9.56□□□□□ -0.88
VPS4B-207ENST00000591519 BOKQ9UMX3 212 aaPredicted RBP9.56□□□□□ -0.88
VPS4B-207ENST00000591519 ERVK-19Q9WJR5 959 aa9.56□□□□□ -0.88
VPS4B-207ENST00000591519 ANGPTL3Q9Y5C1 460 aa9.56□□□□□ -0.88
VPS4B-207ENST00000591519 AKAP9Q99996 3911 aa9.56□□□□□ -0.88
VPS4B-207ENST00000591519 NCKAP5O14513 1909 aa9.55□□□□□ -0.88
VPS4B-207ENST00000591519 A0A1W2PPM1 405 aa9.55□□□□□ -0.88
VPS4B-207ENST00000591519 FAM221AA4D161 298 aa9.55□□□□□ -0.88
VPS4B-207ENST00000591519 LRRC3CA6NJW4 275 aa9.55□□□□□ -0.88
VPS4B-207ENST00000591519 SYT5O00445 386 aa9.55□□□□□ -0.88
VPS4B-207ENST00000591519 MSTNO14793 375 aa9.55□□□□□ -0.88
VPS4B-207ENST00000591519 TRIM3O75382 744 aaPredicted RBP9.55□□□□□ -0.88
VPS4B-207ENST00000591519 PRKRAO75569 313 aaKnown RBP9.55□□□□□ -0.88
VPS4B-207ENST00000591519 SEMA3DO95025 777 aa9.55□□□□□ -0.88
VPS4B-207ENST00000591519 SIX3O95343 332 aaPredicted RBP9.55□□□□□ -0.88
VPS4B-207ENST00000591519 EPPINO95925 133 aa9.55□□□□□ -0.88
VPS4B-207ENST00000591519 CD1EP15812 388 aa9.55□□□□□ -0.88
VPS4B-207ENST00000591519 ARL1P40616 181 aaPredicted RBP9.55□□□□□ -0.88
VPS4B-207ENST00000591519 PEX19P40855 299 aa9.55□□□□□ -0.88
VPS4B-207ENST00000591519 PIK3CGP48736 1102 aa9.55□□□□□ -0.88
VPS4B-207ENST00000591519 KCNJ2P63252 427 aa9.55□□□□□ -0.88
VPS4B-207ENST00000591519 PHEXP78562 749 aa9.55□□□□□ -0.88
VPS4B-207ENST00000591519 FUT7Q11130 342 aa9.55□□□□□ -0.88
VPS4B-207ENST00000591519 DDX39BQ13838 428 aaKnown RBP9.55□□□□□ -0.88
VPS4B-207ENST00000591519 GTF2H2Q13888 395 aa9.55□□□□□ -0.88
VPS4B-207ENST00000591519 CPSF6Q16630 551 aaKnown RBP eCLIP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms